Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 4.3e-189 664.5 329 100.0
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 7.9e-66 255.0 307 46.3
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 6.5e-60 235.3 293 45.4
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 2.1e-58 230.3 291 46.7
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 7.4e-56 221.9 309 42.1
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 4.5e-53 212.6 305 42.0
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 2.2e-52 210.3 300 41.0
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 1.2e-50 204.5 312 39.7
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 4.7e-50 202.6 265 43.4
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 8.0e-50 201.8 293 42.0
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 2.0e-48 197.2 277 42.2
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.6e-48 196.8 293 40.3
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.6e-48 196.8 321 38.9
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 3.3e-48 196.4 260 43.1
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.7e-47 194.1 279 41.2
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 2.2e-47 193.7 268 41.8
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 2.2e-47 193.7 266 41.4
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 3.7e-47 193.0 266 41.4
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 1.4e-46 191.0 297 40.7
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 2.7e-45 186.8 287 41.1
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 5.9e-45 185.7 291 40.5
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 7.7e-45 185.3 288 40.6
Migut.B00468 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.0e-44 184.9 288 44.1
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.7e-44 184.1 256 44.9
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 5.0e-44 182.6 259 40.9
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 6.5e-44 182.2 292 39.7
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 8.5e-44 181.8 279 37.6
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 2.5e-43 180.3 294 39.8
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 5.5e-43 179.1 258 40.7
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 1.6e-42 177.6 283 37.8
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 3.6e-42 176.4 261 39.8
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 6.1e-42 175.6 309 37.2
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 8.0e-42 175.3 293 35.8
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 6.8e-41 172.2 285 37.2
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 6.8e-41 172.2 288 36.5
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 8.8e-41 171.8 296 39.9
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 5.7e-40 169.1 291 36.4
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 2.2e-39 167.2 264 37.9
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 2.4e-38 163.7 286 35.0
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 3.1e-38 163.3 260 42.7
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 3.1e-38 163.3 284 37.3
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 5.4e-38 162.5 283 36.4
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 7.0e-38 162.2 292 35.6
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 9.1e-38 161.8 277 35.7
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 9.1e-38 161.8 265 35.8
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.6e-37 161.0 266 37.2
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 2.0e-37 160.6 264 35.6
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 7.7e-37 158.7 307 34.5
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 7.7e-37 158.7 265 38.9
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 1.0e-36 158.3 282 37.2
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.0e-36 158.3 277 34.7
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 1.0e-36 158.3 284 35.9
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 1.7e-36 157.5 263 38.8
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 3.8e-36 156.4 265 36.6
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 3.8e-36 156.4 277 34.7
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 8.6e-36 155.2 292 34.6
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.9e-35 154.1 265 38.1
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 1.9e-35 154.1 259 36.7
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 2.5e-35 153.7 243 39.5
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 2.5e-35 153.7 265 34.0
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 3.3e-35 153.3 282 34.4
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 5.5e-35 152.5 262 34.4
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 5.5e-35 152.5 257 36.2
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 9.5e-35 151.8 267 35.6
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 2.1e-34 150.6 256 40.2
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 2.1e-34 150.6 280 33.9
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 2.1e-34 150.6 269 38.7
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 2.1e-34 150.6 265 38.9
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 3.6e-34 149.8 280 33.2
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 4.7e-34 149.4 284 33.1
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 6.1e-34 149.1 286 33.9
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 5.2e-33 146.0 283 33.6
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 5.2e-33 146.0 258 34.5
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 8.9e-33 145.2 272 33.5
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 8.9e-33 145.2 234 39.7
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 1.2e-32 144.8 262 37.0
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.5e-32 144.4 277 33.9
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.5e-32 144.4 277 33.9
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 2.0e-32 144.1 285 33.0
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 2.6e-32 143.7 240 39.6
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 4.4e-32 142.9 250 38.0
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 5.7e-32 142.5 250 38.8
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 7.5e-32 142.1 274 33.6
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 9.8e-32 141.7 260 35.0
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 2.2e-31 140.6 274 33.2
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 2.8e-31 140.2 235 38.3
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 3.7e-31 139.8 265 37.0
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 6.3e-31 139.0 274 32.8
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 6.3e-31 139.0 263 36.9
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 1.8e-30 137.5 259 37.5
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 3.1e-30 136.7 284 32.4
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 4.1e-30 136.3 263 37.3
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 1.6e-29 134.4 259 31.3
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 2.7e-29 133.7 258 37.2
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 7.8e-29 132.1 258 32.9
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 1.3e-28 131.3 231 35.1
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 2.3e-28 130.6 272 31.2
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.9e-27 127.5 285 30.2
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 2.5e-27 127.1 272 30.9
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 5.6e-27 125.9 233 33.0
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 2.8e-26 123.6 266 33.1
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 3.6e-26 123.2 233 32.6
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 3.6e-26 123.2 269 34.6
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 4.7e-26 122.9 287 30.0
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 4.7e-26 122.9 263 31.2
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 8.0e-26 122.1 274 32.8
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 1.0e-25 121.7 278 30.2
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 1.8e-25 120.9 278 31.7
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 3.1e-25 120.2 265 30.6
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 3.1e-25 120.2 283 31.8
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 5.2e-25 119.4 279 31.5
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.2e-25 119.4 267 31.5
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 6.8e-25 119.0 285 31.9
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 8.9e-25 118.6 314 28.3
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 1.2e-24 118.2 287 29.3
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.2e-24 118.2 258 32.2
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 1.2e-24 118.2 253 32.8
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 1.5e-24 117.9 313 29.4
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 1.5e-24 117.9 313 29.4
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.5e-24 117.9 257 32.7
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 2.0e-24 117.5 289 29.8
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 2.6e-24 117.1 265 29.8
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 3.4e-24 116.7 206 34.5
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 3.4e-24 116.7 239 36.8
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 7.5e-24 115.5 266 32.7
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 9.8e-24 115.2 269 31.2
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.3e-23 114.8 271 30.6
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 1.3e-23 114.8 290 28.6
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 2.2e-23 114.0 284 28.9
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.2e-23 114.0 284 31.3
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 2.9e-23 113.6 234 35.9
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 3.7e-23 113.2 262 28.6
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 8.3e-23 112.1 276 29.3
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 8.3e-23 112.1 289 30.4
Os03g0232000 Oryza sativa ssp. japonica HOM05D003497 ORTHO05D003964 8.3e-23 112.1 245 31.4
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 8.3e-23 112.1 244 33.2
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 1.9e-22 110.9 260 30.4
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 7.0e-22 109.0 233 32.6
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 7.0e-22 109.0 379 25.1
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 7.0e-22 109.0 252 31.7
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 9.2e-22 108.6 262 28.2
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 1.6e-21 107.8 262 29.4
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 1.6e-21 107.8 262 31.7
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 3.5e-21 106.7 254 28.3
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 1.0e-20 105.1 147 41.5
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 2.3e-20 104.0 266 28.6
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 3.0e-20 103.6 175 35.4
Carub.0002s1705 Capsella rubella HOM05D003497 ORTHO05D003964 5.6e-19 99.4 254 29.9
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 7.3e-19 99.0 229 32.3
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 3.6e-18 96.7 262 26.3
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 4.7e-18 96.3 309 25.2
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 6.2e-18 95.9 236 29.7
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 2.0e-16 90.9 260 27.3
AL2G29670 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 3.4e-16 90.1 194 34.5
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 7.5e-16 89.0 245 29.4
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 7.5e-16 89.0 245 29.4
Sed0003270 Sechium edule HOM05D003497 ORTHO05D003964 1.7e-15 87.8 230 30.9
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 6.4e-15 85.9 292 30.5
Zm00001eb009480 Zea mays HOM05D003497 ORTHO05D003964 6.4e-15 85.9 281 24.9
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 2.4e-14 84.0 302 24.8
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 3.2e-14 83.6 87 49.4
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 5.4e-14 82.8 83 49.4
Actinidia04396 Actinidia chinensis HOM05D003497 ORTHO05D003964 9.2e-14 82.0 210 32.4
PSO017G5705 Papaver somniferum HOM05D003497 ORTHO05D003964 2.1e-13 80.9 112 47.3
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 4.6e-13 79.7 80 48.8
AT1G70360 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 1.7e-12 77.8 199 31.7
CBR_g19394 Chara braunii HOM05D003497 ORTHO05D003964 8.6e-12 75.5 102 43.1
PSO170G1569 Papaver somniferum HOM05D003497 ORTHO05D003964 3.3e-11 73.6 80 53.8
Sed0016990 Sechium edule HOM05D003497 ORTHO05D003964 7.3e-11 72.4 212 29.2
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 9.5e-11 72.0 80 48.8
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 2.1e-10 70.9 104 37.5
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 2.8e-10 70.5 176 29.5
Sed0009840 Sechium edule HOM05D003497 ORTHO05D003964 3.6e-10 70.1 148 33.1
SMO270G0122 Selaginella moellendorffii HOM05D003497 ORTHO05D003964 3.6e-10 70.1 197 29.9
Lsat_1_v5_gn_5_117240 Lactuca sativa HOM05D003497 ORTHO05D003964 2.0e-08 64.3 84 40.5
C03p57300 Brassica napus HOM05D003497 ORTHO05D003964 5.8e-08 62.8 167 28.1
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 1.3e-07 61.6 150 27.3
Actinidia02442 Actinidia chinensis HOM05D003497 ORTHO05D003964 1.7e-07 61.2 74 45.9
Cfa004698 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.7e-07 61.2 97 38.1
Potri.017G134500 Populus trichocarpa HOM05D003497 ORTHO05D003964 1.7e-07 61.2 82 39.0
BcaC07g39213 Brassica carinata HOM05D003497 ORTHO05D024176 1.4e-06 58.2 234 24.4
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 9.2e-06 55.5 199 28.6


User provided reference genes

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