Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00467 Erythranthe guttata HOM05D003497 ORTHO05D003964 5.6e-206 721.1 471 100.0
Migut.B00464 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.9e-44 184.5 454 32.6
MSTRG.16671 Avicennia marina HOM05D003497 ORTHO05D003964 2.5e-41 174.1 431 31.8
SGA_v2.0_scaffold225G43063 Striga asiatica HOM05D003497 ORTHO05D003964 1.3e-37 161.8 455 29.5
unitig_744.g24206 Utricularia gibba HOM05D003497 ORTHO05D003964 7.9e-35 152.5 432 28.7
DCAR_021943 Daucus carota HOM05D003497 ORTHO05D003964 3.0e-34 150.6 418 28.9
Oeu025307.1 Olea europaea HOM05D003497 ORTHO05D003964 1.5e-33 148.3 418 30.1
CSS0043603 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.4e-31 141.0 403 30.8
CSS0013379 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 1.3e-29 135.2 381 30.2
Cc02_g20070 Coffea canephora HOM05D003497 ORTHO05D003964 2.9e-29 134.0 399 30.1
Migut.B00469 Erythranthe guttata HOM05D003497 ORTHO05D003964 1.9e-28 131.3 420 30.7
CSS0047045 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 3.2e-28 130.6 425 28.7
SalBow6G6060 Salvia bowleyana HOM05D003497 ORTHO05D003964 5.5e-28 129.8 418 28.9
Prupe.8G150500 Prunus persica HOM05D003497 ORTHO05D003964 3.0e-26 124.0 460 26.3
Rhsim05G0093000 Rhododendron simsii HOM05D003497 ORTHO05D003964 8.8e-26 122.5 506 26.1
Actinidia28001 Actinidia chinensis HOM05D000349 ORTHO05D003964 1.5e-25 121.7 379 28.8
vmacro22257 Vaccinium macrocarpon HOM05D003497 ORTHO05D003964 7.4e-25 119.4 392 27.0
Cfa004695 Carpinus fangiana HOM05D003497 ORTHO05D003964 1.4e-23 115.2 386 25.1
CAN.G911.43 Capsicum annuum HOM05D003497 ORTHO05D003964 1.8e-23 114.8 433 26.1
Thecc.02G120200 Theobroma cacao HOM05D003497 ORTHO05D003964 4.1e-23 113.6 441 25.2
QL11p029247 Quercus lobata HOM05D003497 ORTHO05D003964 7.0e-23 112.8 389 28.8
AUR62027025 Chenopodium quinoa HOM05D003497 ORTHO05D003964 9.1e-23 112.5 394 25.9
Haze_10291 Corylus avellana HOM05D003497 ORTHO05D003964 3.5e-22 110.5 364 25.8
Migut.B00470 Erythranthe guttata HOM05D003497 ORTHO05D003964 3.5e-22 110.5 379 25.1
Nitab4.5_0000003g0710 Nicotiana tabacum HOM05D003497 ORTHO05D003964 3.5e-22 110.5 365 27.9
GSVIVG01037051001 Vitis vinifera HOM05D003497 ORTHO05D003964 7.7e-22 109.4 445 25.6
TWI14G1256 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 1.0e-21 109.0 418 25.4
CiPaw.06G163900 Carya illinoinensis HOM05D003497 ORTHO05D003964 1.7e-21 108.2 456 26.1
Solyc01g006990.4 Solanum lycopersicum HOM05D003497 ORTHO05D003964 1.7e-21 108.2 425 25.6
Sopen01g002980 Solanum pennellii HOM05D003497 ORTHO05D003964 1.7e-21 108.2 425 25.6
Lsat_1_v5_gn_5_117220 Lactuca sativa HOM05D003497 ORTHO05D003964 2.2e-21 107.8 397 26.2
CSS0013739 Camellia sinensis var. sinensis HOM05D003497 ORTHO05D003964 2.9e-21 107.5 372 26.9
Nitab4.5_0003918g0020 Nicotiana tabacum HOM05D003497 ORTHO05D003964 5.0e-21 106.7 368 26.9
Haze_10298 Corylus avellana HOM05D003497 ORTHO05D003964 6.5e-21 106.3 390 25.4
MELO3C018024.2 Cucumis melo HOM05D003497 ORTHO05D003964 1.1e-20 105.5 433 24.7
Eucgr.G00280 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.1e-20 105.5 390 26.2
Peaxi162Scf00152g00641 Petunia axillaris HOM05D003497 ORTHO05D003964 1.5e-20 105.1 424 25.9
Atru.chr5.2286 Acer truncatum HOM05D003497 ORTHO05D003964 2.5e-20 104.4 448 25.0
Eucgr.I02495 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.5e-20 104.4 389 25.2
Ah.01g007110 Amaranthus hybridus HOM05D003497 ORTHO05D003964 5.5e-20 103.2 381 24.4
Duzib132G0146 Durio zibethinus HOM05D003497 ORTHO05D003964 5.5e-20 103.2 398 25.4
HanXRQChr16g0502181 Helianthus annuus HOM05D003497 ORTHO05D003964 5.5e-20 103.2 384 25.8
Sc18g0007350 Simmondsia chinensis HOM05D003497 ORTHO05D003964 5.5e-20 103.2 455 25.3
ECA234G0007 Erigeron canadensis HOM05D003497 ORTHO05D003964 7.2e-20 102.8 139 44.6
Potri.005G109700 Populus trichocarpa HOM05D003497 ORTHO05D003964 7.2e-20 102.8 414 25.6
PGSC0003DMG400021329 Solanum tuberosum HOM05D003497 ORTHO05D003964 7.2e-20 102.8 429 25.4
TAR625G0452 Trochodendron aralioides HOM05D003497 ORTHO05D003964 7.2e-20 102.8 396 25.0
PGR142G0099 Punica granatum HOM05D003497 ORTHO05D003964 1.2e-19 102.1 398 25.6
CsaV3_4G000070 Cucumis sativus L. HOM05D003497 ORTHO05D003964 3.6e-19 100.5 434 24.4
Nn6g34530 Nelumbo nucifera HOM05D003497 ORTHO05D003964 1.0e-18 99.0 450 23.6
AUR62030867 Chenopodium quinoa HOM05D003497 ORTHO05D003964 3.0e-18 97.4 384 26.0
Sed0023460 Sechium edule HOM05D003497 ORTHO05D003964 1.2e-17 95.5 369 24.7
ClCG10G010030 Citrullus lanatus HOM05D003497 ORTHO05D003964 1.5e-17 95.1 467 22.3
Nn3g19312 Nelumbo nucifera HOM05D003497 ORTHO05D003964 2.0e-17 94.7 450 23.3
Dinv09537 Davidia involucrata HOM05D006380 ORTHO05D008400 3.4e-17 94.0 142 42.3
RcHm_v2.0_Chr6g0248431 Rosa chinensis HOM05D003497 ORTHO05D003964 4.4e-17 93.6 384 24.0
Sabra05G0090000 Salix brachista HOM05D003497 ORTHO05D003964 7.5e-17 92.8 450 25.1
FvH4_2g03310 Fragaria vesca HOM05D003497 ORTHO05D003964 9.8e-17 92.4 481 21.8
Atru.chr5.2290 Acer truncatum HOM05D003497 ORTHO05D003964 1.3e-16 92.0 386 27.2
FAN27G0942 Fragaria x ananassa HOM05D003497 ORTHO05D003964 2.8e-16 90.9 447 22.1
FAN20G1538 Fragaria x ananassa HOM05D003497 ORTHO05D003964 6.3e-16 89.7 481 21.8
FAN20G2306 Fragaria x ananassa HOM05D003497 ORTHO05D003964 6.3e-16 89.7 481 21.8
CANSAT25G1915 Cannabis sativa HOM05D003497 ORTHO05D003964 1.1e-15 89.0 445 22.5
TAR381G0023 Trochodendron aralioides HOM05D003497 ORTHO05D003964 1.1e-15 89.0 375 24.5
EL10Ac9g22176 Beta vulgaris HOM05D003497 ORTHO05D003964 2.4e-15 87.8 381 22.8
SEGI_36088 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 2.4e-15 87.8 423 23.2
HanXRQChr10g0290301 Helianthus annuus HOM05D003497 ORTHO05D003964 1.6e-14 85.1 124 40.3
Eucgr.H03378 Eucalyptus grandis HOM05D003497 ORTHO05D003964 2.0e-14 84.7 391 26.1
THA.LOC104824678 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 5.9e-14 83.2 168 33.9
Gohir.A13G047900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 7.7e-14 82.8 376 23.9
MD10G1110600 Malus domestica HOM05D003497 ORTHO05D003964 7.7e-14 82.8 129 40.3
Gorai.013G052000 Gossypium raimondii HOM05D003497 ORTHO05D003964 1.0e-13 82.4 122 39.3
ATR0739G052 Amborella trichopoda HOM05D003497 ORTHO05D003964 1.3e-13 82.0 407 23.6
Manes.07G056700 Manihot esculenta HOM05D003497 ORTHO05D003964 1.3e-13 82.0 394 23.1
Gohir.D13G046300 Gossypium hirsutum HOM05D003497 ORTHO05D003964 1.7e-13 81.6 122 39.3
HanXRQChr10g0290271 Helianthus annuus HOM05D003497 ORTHO05D003964 2.2e-13 81.3 124 39.5
BcaB03g14136 Brassica carinata HOM05D003497 ORTHO05D003964 3.8e-13 80.5 129 38.0
PSO017G1612 Papaver somniferum HOM05D003497 ORTHO05D003964 6.5e-13 79.7 400 23.5
THA.LOC104822142 Tarenaya hassleriana HOM05D003497 ORTHO05D003964 6.5e-13 79.7 135 33.3
MD05G1106300 Malus domestica HOM05D003497 ORTHO05D003964 8.5e-13 79.3 121 40.5
CARHR024190 Cardamine hirsuta HOM05D003497 ORTHO05D003964 1.5e-12 78.6 150 35.3
Aqoxy5G00815 Aquilegia oxysepala HOM05D003497 ORTHO05D003964 1.9e-12 78.2 126 36.5
CDE04G1396 Ceratophyllum demersum HOM05D003497 ORTHO05D003964 1.9e-12 78.2 82 50.0
MD10G1110700 Malus domestica HOM05D003497 ORTHO05D003964 3.2e-12 77.4 133 38.3
Ca_11026_v3 Cicer arietinum L. HOM05D003497 ORTHO05D003964 4.2e-12 77.0 165 33.9
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 4.2e-12 77.0 82 50.0
Glyma.20G135900 Glycine max HOM05D003497 ORTHO05D003964 5.5e-12 76.6 94 45.7
HanXRQChr10g0290281 Helianthus annuus HOM05D003497 ORTHO05D003964 5.5e-12 76.6 101 40.6
Sp7g01980 Schrenkiella parvula HOM05D003497 ORTHO05D003964 7.2e-12 76.3 133 34.6
BcaC06g35052 Brassica carinata HOM05D003497 ORTHO05D003964 1.2e-11 75.5 130 36.2
BolC7t42548H Brassica oleracea HOM05D003497 ORTHO05D003964 1.2e-11 75.5 130 36.2
Psat6g213160 Pisum sativum HOM05D003497 ORTHO05D003964 1.2e-11 75.5 105 43.8
Aa31LG7G7660 Aethionema arabicum HOM05D003497 ORTHO05D003964 1.6e-11 75.1 131 35.9
Haze_10290 Corylus avellana HOM05D003497 ORTHO05D003964 1.6e-11 75.1 123 39.0
Glyma.10G255600 Glycine max HOM05D003497 ORTHO05D003964 1.6e-11 75.1 94 46.8
VMungo0720G1031 Vigna mungo HOM05D003497 ORTHO05D003964 1.6e-11 75.1 136 39.0
C07p20260 Brassica napus HOM05D003497 ORTHO05D003964 2.1e-11 74.7 130 36.2
BraA07t29128Z Brassica rapa HOM05D003497 ORTHO05D003964 2.7e-11 74.3 125 37.6
Thhalv10009461m.g Eutrema salsugineum HOM05D003497 ORTHO05D003964 2.7e-11 74.3 111 37.8
PSO170G5054 Papaver somniferum HOM05D003497 ORTHO05D003964 3.6e-11 73.9 398 22.6
A07p13790 Brassica napus HOM05D003497 ORTHO05D003964 4.7e-11 73.6 124 37.1
Lalb_Chr06g0164971 Lupinus albus HOM05D003497 ORTHO05D003964 6.1e-11 73.2 82 48.8
Phvul.007G047200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 6.1e-11 73.2 118 40.7
AL1G37530 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 8.0e-11 72.8 130 32.3
Ciclev10028907m.g Citrus clementina HOM05D003497 ORTHO05D003964 1.0e-10 72.4 106 40.6
FAN18G2835 Fragaria x ananassa HOM05D003497 ORTHO05D003964 1.4e-10 72.0 101 35.6
AT1G23780 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 1.8e-10 71.6 130 31.5
BcaB03g11953 Brassica carinata HOM05D003497 ORTHO05D003964 1.8e-10 71.6 88 45.5
C04p49930 Brassica napus HOM05D003497 ORTHO05D003964 1.8e-10 71.6 128 33.6
BolC4t26586H Brassica oleracea HOM05D003497 ORTHO05D003964 1.8e-10 71.6 128 33.6
Lj5g0015963 Lotus japonicus HOM05D003497 ORTHO05D003964 1.8e-10 71.6 96 42.7
Medtr1g106020 Medicago truncatula HOM05D003497 ORTHO05D003964 1.8e-10 71.6 161 34.2
Sp1g21160 Schrenkiella parvula HOM05D003497 ORTHO05D003964 1.8e-10 71.6 130 33.8
TPR.G21155 Trifolium pratense HOM05D003497 ORTHO05D003964 2.3e-10 71.2 83 48.2
COL.COLO4_32482 Corchorus olitorius HOM05D003497 ORTHO05D003964 3.0e-10 70.9 98 41.8
Medtr4g019560 Medicago truncatula HOM05D003497 ORTHO05D003964 3.0e-10 70.9 115 39.1
FvH4_5g20811 Fragaria vesca HOM05D003497 ORTHO05D003964 4.0e-10 70.5 101 35.6
Gohir.D02G203142 Gossypium hirsutum HOM05D003497 ORTHO05D004787 4.0e-10 70.5 97 41.2
Gorai.005G229700 Gossypium raimondii HOM05D003497 ORTHO05D003964 4.0e-10 70.5 97 41.2
RcHm_v2.0_Chr4g0407381 Rosa chinensis HOM05D003497 ORTHO05D003964 4.0e-10 70.5 146 33.6
MD10G1110300 Malus domestica HOM05D003497 ORTHO05D003964 5.2e-10 70.1 114 35.1
BraA04t17199Z Brassica rapa HOM05D003497 ORTHO05D003964 6.8e-10 69.7 128 32.8
Carub.0001s2329 Capsella rubella HOM05D003497 ORTHO05D003964 6.8e-10 69.7 130 32.3
FAN04G2985 Fragaria x ananassa HOM05D003497 ORTHO05D003964 6.8e-10 69.7 101 34.7
TWI14G0922 Tripterygium wilfordii HOM05D003497 ORTHO05D003964 6.8e-10 69.7 94 45.7
arahy.Tifrunner.gnm1.ann1.6MCD86 Arachis hypogaea HOM05D003497 ORTHO05D003964 8.8e-10 69.3 162 32.1
Cpa.g.c35687 Carica papaya HOM05D003497 ORTHO05D003964 8.8e-10 69.3 111 37.8
RcHm_v2.0_Chr4g0407391 Rosa chinensis HOM05D003497 ORTHO05D003964 8.8e-10 69.3 101 36.6
Potri.015G020600 Populus trichocarpa HOM05D003497 ORTHO05D003964 1.2e-09 68.9 86 40.7
BcaB06g27743 Brassica carinata HOM05D003497 ORTHO05D003964 1.5e-09 68.6 81 44.4
BcaC02g08840 Brassica carinata HOM05D003497 ORTHO05D003964 2.0e-09 68.2 98 40.8
Gohir.A03G180900 Gossypium hirsutum HOM05D003497 ORTHO05D003964 2.0e-09 68.2 97 40.2
PGR102G1733 Punica granatum HOM05D003497 ORTHO05D003964 2.0e-09 68.2 120 35.0
Ciclev10028208m.g Citrus clementina HOM05D003497 ORTHO05D003964 2.6e-09 67.8 96 38.5
Medtr7g057330 Medicago truncatula HOM05D003497 ORTHO05D003964 3.4e-09 67.4 115 38.3
Pp3c15_1340 Physcomitrium patens HOM05D003497 ORTHO05D003964 3.4e-09 67.4 99 40.4
A04p15640 Brassica napus HOM05D003497 ORTHO05D003964 4.4e-09 67.0 128 32.8
MD10G1110400 Malus domestica HOM05D003497 ORTHO05D003964 4.4e-09 67.0 81 42.0
Phvul.005G037100 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 4.4e-09 67.0 90 42.2
RcHm_v2.0_Chr4g0407371 Rosa chinensis HOM05D003497 ORTHO05D003964 9.8e-09 65.9 104 37.5
AL1G37520 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 1.3e-08 65.5 100 40.0
PGR102G1148 Punica granatum HOM05D003497 ORTHO05D003964 1.3e-08 65.5 115 35.7
Phvul.005G029000 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 2.2e-08 64.7 107 37.4
HPP92_007713 Vanilla planifolia HOM05D003497 ORTHO05D003964 2.2e-08 64.7 136 34.6
MBI16_g32073_MAGBIO Magnolia biondii HOM05D003497 ORTHO05D003964 2.8e-08 64.3 121 33.1
PGR119G2181 Punica granatum HOM05D003497 ORTHO05D003964 3.7e-08 63.9 100 35.0
CARHR164040 Cardamine hirsuta HOM05D003497 ORTHO05D003964 6.3e-08 63.2 132 31.8
Phvul.005G029200 Phaseolus vulgaris HOM05D003497 ORTHO05D003964 6.3e-08 63.2 101 38.6
AagrBONN_evm.TU.Sc2ySwM_344.3993 Anthoceros agrestis HOM05D003497 ORTHO05D003964 8.3e-08 62.8 80 43.8
Carub.0001s2328 Capsella rubella HOM05D003497 ORTHO05D003964 8.3e-08 62.8 131 28.2
Sed0000294 Sechium edule HOM05D003497 ORTHO05D003964 1.8e-07 61.6 101 35.6
AT1G23770 Arabidopsis thaliana HOM05D003497 ORTHO05D003964 2.4e-07 61.2 109 33.0
PSO017G7033 Papaver somniferum HOM05D003497 ORTHO05D003964 2.4e-07 61.2 89 39.3
PSO170G0850 Papaver somniferum HOM05D003497 ORTHO05D003964 2.4e-07 61.2 89 39.3
AL5G35170 Arabidopsis lyrata HOM05D003497 ORTHO05D003964 3.1e-07 60.8 77 39.0
Mapoly0001s0353 Marchantia polymorpha HOM05D003497 ORTHO05D003964 3.1e-07 60.8 99 33.3
COL.COLO4_32483 Corchorus olitorius HOM05D003497 ORTHO05D003964 5.4e-07 60.1 116 32.8
CARHR164020 Cardamine hirsuta HOM05D003497 ORTHO05D003964 7.0e-07 59.7 113 33.6
Actinidia02442 Actinidia chinensis HOM05D003497 ORTHO05D003964 9.1e-07 59.3 70 44.3
BcaC02g08839 Brassica carinata HOM05D003497 ORTHO05D003964 9.1e-07 59.3 107 30.8
RcHm_v2.0_Chr4g0395411 Rosa chinensis HOM05D003497 ORTHO05D003964 1.2e-06 58.9 96 37.5
SEGI_41103 Sequoiadendron giganteum HOM05D003497 ORTHO05D003964 3.5e-06 57.4 128 35.9
Haze_10296 Corylus avellana HOM05D003497 ORTHO05D003964 4.5e-06 57.0 66 48.5


User provided reference genes

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