Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00459 Erythranthe guttata HOM05D001568 ORTHO05D004404 1.1e-25 119.4 67 100.0
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.8e-20 102.1 67 88.1
TWI59G0092 Tripterygium wilfordii HOM05D001568 ORTHO05D004404 1.1e-19 99.4 65 83.1
CSS0000365 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 3.3e-19 97.8 65 81.5
Aqoxy6G02530 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 6.2e-18 93.6 63 84.1
CSS0019733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 6.2e-18 93.6 65 80.0
PSO017G7292 Papaver somniferum HOM05D001568 ORTHO05D004404 6.2e-18 93.6 65 78.5
PSO170G4708 Papaver somniferum HOM05D001568 ORTHO05D004404 6.2e-18 93.6 65 78.5
CAN.G606.68 Capsicum annuum HOM05D001568 ORTHO05D004404 1.8e-17 92.0 65 80.0
TAR625G0364 Trochodendron aralioides HOM05D001568 ORTHO05D004404 3.1e-17 91.3 65 80.0
Nitab4.5_0001099g0080 Nicotiana tabacum HOM05D001568 ORTHO05D004404 6.9e-17 90.1 65 78.5
Potri.001G290200 Populus trichocarpa HOM05D001568 ORTHO05D004404 6.9e-17 90.1 63 79.4
Oeu037288.1 Olea europaea HOM05D001568 ORTHO05D004404 9.0e-17 89.7 65 76.9
Prupe.8G149100 Prunus persica HOM05D001568 ORTHO05D004404 9.0e-17 89.7 67 73.1
PGSC0003DMG400025934 Solanum tuberosum HOM05D001568 ORTHO05D004404 1.2e-16 89.4 65 78.5
Manes.10G086400 Manihot esculenta HOM05D001568 ORTHO05D004404 1.5e-16 89.0 65 76.9
Oeu021354.1 Olea europaea HOM05D001568 ORTHO05D004404 2.0e-16 88.6 65 76.9
Potri.009G085800 Populus trichocarpa HOM05D001568 ORTHO05D004404 2.0e-16 88.6 65 73.8
Thecc.02G119400 Theobroma cacao HOM05D001568 ORTHO05D004404 2.0e-16 88.6 65 75.4
TAR376G0823 Trochodendron aralioides HOM05D001568 ORTHO05D004404 2.0e-16 88.6 65 76.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 4.5e-16 87.4 65 75.4
CiPaw.05G020400 Carya illinoinensis HOM05D001568 ORTHO05D004404 5.8e-16 87.0 65 75.4
Cc00_g17980 Coffea canephora HOM05D001568 ORTHO05D004404 7.6e-16 86.7 65 72.3
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 7.6e-16 86.7 69 72.5
RhsimUnG0183600 Rhododendron simsii HOM05D001568 ORTHO05D004404 7.6e-16 86.7 69 72.5
Solyc01g106890.2 Solanum lycopersicum HOM05D001568 ORTHO05D004404 7.6e-16 86.7 65 75.4
Sopen01g049170 Solanum pennellii HOM05D001568 ORTHO05D004404 7.6e-16 86.7 65 75.4
TAR628G0963 Trochodendron aralioides HOM05D001568 ORTHO05D004404 7.6e-16 86.7 62 79.0
COL.COLO4_32490 Corchorus olitorius HOM05D001568 ORTHO05D004404 9.9e-16 86.3 66 72.7
Haze_10310 Corylus avellana HOM05D001568 ORTHO05D004404 1.3e-15 85.9 65 73.8
MD10G1109000 Malus domestica HOM05D001568 ORTHO05D004404 1.3e-15 85.9 67 70.1
Manes.07G057600 Manihot esculenta HOM05D001568 ORTHO05D004404 1.3e-15 85.9 65 72.3
Gohir.D02G203199 Gossypium hirsutum HOM05D001568 ORTHO05D004404 1.7e-15 85.5 66 71.2
MD05G1104700 Malus domestica HOM05D001568 ORTHO05D004404 1.7e-15 85.5 67 70.1
SalBow6G5155 Salvia bowleyana HOM05D001568 ORTHO05D004404 1.7e-15 85.5 62 79.0
Sed0001915 Sechium edule HOM05D001568 ORTHO05D004404 1.7e-15 85.5 65 73.8
Nitab4.5_0001458g0030 Nicotiana tabacum HOM05D001568 ORTHO05D004404 2.2e-15 85.1 62 75.8
Peaxi162Scf00016g03013 Petunia axillaris HOM05D001568 ORTHO05D004404 2.2e-15 85.1 62 75.8
PGSC0003DMG400012835 Solanum tuberosum HOM05D001568 ORTHO05D004404 2.2e-15 85.1 65 72.3
Ciclev10029760m.g Citrus clementina HOM05D001568 ORTHO05D004404 2.9e-15 84.7 66 74.2
Hma1.2p1_1051F.1_g252100 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 2.9e-15 84.7 65 70.8
Hma1.2p1_2793F.1_g328635 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 2.9e-15 84.7 65 70.8
Duzib052G0823 Durio zibethinus HOM05D001568 ORTHO05D004404 3.8e-15 84.3 65 72.3
FAN15G0246 Fragaria x ananassa HOM05D001568 ORTHO05D004404 3.8e-15 84.3 65 70.8
Gohir.A13G047600 Gossypium hirsutum HOM05D001568 ORTHO05D004404 3.8e-15 84.3 65 69.2
Gohir.D13G045900 Gossypium hirsutum HOM05D001568 ORTHO05D004404 3.8e-15 84.3 65 69.2
Gorai.005G230000 Gossypium raimondii HOM05D001568 ORTHO05D004404 3.8e-15 84.3 64 73.4
Hma1.2p1_0661F.1_g198120 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 4.9e-15 84.0 65 70.8
Gorai.013G051400 Gossypium raimondii HOM05D001568 ORTHO05D004404 6.4e-15 83.6 65 67.7
Nn5g30644 Nelumbo nucifera HOM05D001568 ORTHO05D004404 6.4e-15 83.6 65 69.2
Peaxi162Scf00003g02832 Petunia axillaris HOM05D001568 ORTHO05D004404 6.4e-15 83.6 63 73.0
CANSAT25G0020 Cannabis sativa HOM05D001568 ORTHO05D004404 8.4e-15 83.2 63 71.4
MELO3C018020.2 Cucumis melo HOM05D001568 ORTHO05D004404 8.4e-15 83.2 65 72.3
Nn6g34513 Nelumbo nucifera HOM05D001568 ORTHO05D004404 8.4e-15 83.2 65 70.8
QL11p029492 Quercus lobata HOM05D001568 ORTHO05D004404 8.4e-15 83.2 62 75.8
RcHm_v2.0_Chr6g0248611 Rosa chinensis HOM05D001568 ORTHO05D004404 8.4e-15 83.2 65 70.8
Sed0007286 Sechium edule HOM05D001568 ORTHO05D004404 8.4e-15 83.2 65 70.8
Gohir.A03G181200 Gossypium hirsutum HOM05D001568 ORTHO05D004404 1.1e-14 82.8 66 69.7
SHI05029 Sapria himalayana HOM05D001568 ORTHO05D004404 1.1e-14 82.8 67 70.1
Cpa.g.sc106.34 Carica papaya HOM05D001568 ORTHO05D004404 1.4e-14 82.4 65 69.2
ClCG10G010080 Citrullus lanatus HOM05D001568 ORTHO05D004404 1.4e-14 82.4 62 75.8
CsaV3_4G000120 Cucumis sativus L. HOM05D001568 ORTHO05D004404 1.4e-14 82.4 65 70.8
Duzib132G0295 Durio zibethinus HOM05D001568 ORTHO05D004404 1.4e-14 82.4 65 72.3
FvH4_2g03450 Fragaria vesca HOM05D001568 ORTHO05D004404 1.9e-14 82.0 63 71.4
FAN24G1537 Fragaria x ananassa HOM05D001568 ORTHO05D004404 1.9e-14 82.0 63 71.4
THA.LOC104803443 Tarenaya hassleriana HOM05D001568 ORTHO05D004404 4.2e-14 80.9 68 69.1
Psat0s6663g0040 Pisum sativum HOM05D001568 ORTHO05D004404 7.1e-14 80.1 66 72.7
Actinidia27997 Actinidia chinensis HOM05D001568 ORTHO05D004404 9.3e-14 79.7 66 69.7
Lj1g0010962 Lotus japonicus HOM05D001568 ORTHO05D004404 1.2e-13 79.3 64 71.9
PGR142G4268 Punica granatum HOM05D001568 ORTHO05D004404 1.6e-13 79.0 63 71.4
AUR62027022 Chenopodium quinoa HOM05D001568 ORTHO05D004404 2.1e-13 78.6 66 69.7
BcaB06g26036 Brassica carinata HOM05D001568 ORTHO05D004404 2.7e-13 78.2 65 61.5
Lsat_1_v5_gn_9_113420 Lactuca sativa HOM05D001568 ORTHO05D004404 2.7e-13 78.2 63 66.7
Atru.chr5.2306 Acer truncatum HOM05D001568 ORTHO05D004404 4.6e-13 77.4 61 67.2
Glyma.01G241700 Glycine max HOM05D001568 ORTHO05D004404 6.0e-13 77.0 56 76.8
Actinidia34354 Actinidia chinensis HOM05D001568 ORTHO05D004404 7.9e-13 76.6 61 75.4
TPR.G8320 Trifolium pratense HOM05D001568 ORTHO05D004404 7.9e-13 76.6 59 78.0
Aa31LG8G6440 Aethionema arabicum HOM05D001568 ORTHO05D004404 1.8e-12 75.5 63 65.1
AL3G33100 Arabidopsis lyrata HOM05D001568 ORTHO05D004404 2.3e-12 75.1 65 63.1
Phvul.002G051000 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 2.3e-12 75.1 52 80.8
Carub.0003s1953 Capsella rubella HOM05D001568 ORTHO05D004404 3.0e-12 74.7 65 63.1
A05p29940 Brassica napus HOM05D001568 ORTHO05D004404 3.9e-12 74.3 65 63.1
BraA05t21839Z Brassica rapa HOM05D001568 ORTHO05D004404 3.9e-12 74.3 65 63.1
DCAR_021945 Daucus carota HOM05D001568 ORTHO05D004404 3.9e-12 74.3 58 72.4
BcaC05g28437 Brassica carinata HOM05D001568 ORTHO05D004404 5.1e-12 73.9 65 63.1
C05p45170 Brassica napus HOM05D001568 ORTHO05D004404 5.1e-12 73.9 65 63.1
BolC5t33243H Brassica oleracea HOM05D001568 ORTHO05D004404 5.1e-12 73.9 65 63.1
Medtr5g005330 Medicago truncatula HOM05D001568 ORTHO05D004404 6.7e-12 73.6 59 74.6
A01p35050 Brassica napus HOM05D001568 ORTHO05D004404 1.1e-11 72.8 65 58.5
BraA01t03586Z Brassica rapa HOM05D001568 ORTHO05D004404 1.1e-11 72.8 65 58.5
AT3G19660 Arabidopsis thaliana HOM05D001568 ORTHO05D004404 1.9e-11 72.0 65 61.5
Sc08g0004350 Simmondsia chinensis HOM05D001568 ORTHO05D004404 1.9e-11 72.0 68 64.7
AUR62030863 Chenopodium quinoa HOM05D001568 ORTHO05D004404 2.5e-11 71.6 67 65.7
Aqoxy1G00264 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 7.4e-11 70.1 61 60.7
Aqoxy335s003 Aquilegia oxysepala HOM05D001568 ORTHO05D004404 7.4e-11 70.1 61 60.7
Lalb_Chr02g0144911 Lupinus albus HOM05D001568 ORTHO05D004404 7.4e-11 70.1 57 64.9
CARHR095120 Cardamine hirsuta HOM05D001568 ORTHO05D004404 1.3e-10 69.3 65 60.0
Nitab4.5_0010145g0040 Nicotiana tabacum HOM05D001568 ORTHO05D004404 1.1e-09 66.2 46 82.6
EL10Ac9g22181 Beta vulgaris HOM05D001568 ORTHO05D004404 1.8e-09 65.5 62 62.9
VMungo1215G2526 Vigna mungo HOM05D001946 ORTHO05D002111 4.0e-09 64.3 65 61.5
Prupe.3G242600 Prunus persica HOM05D001568 ORTHO05D004404 4.5e-08 60.8 63 57.1
Manes.02G064800 Manihot esculenta HOM05D001568 ORTHO05D004404 1.0e-07 59.7 59 59.3
TAR622G0735 Trochodendron aralioides HOM05D000764 ORTHO05D002006 1.3e-07 59.3 59 61.0
QL02p053549 Quercus lobata HOM05D001568 ORTHO05D004404 1.7e-07 58.9 61 55.7
Phvul.008G021300 Phaseolus vulgaris HOM05D001568 ORTHO05D004404 2.9e-07 58.2 56 62.5
Medtr6g016890 Medicago truncatula HOM05D001568 ORTHO05D004404 4.9e-07 57.4 61 57.4
Nn3g17638 Nelumbo nucifera HOM05D001568 ORTHO05D004404 4.9e-07 57.4 56 58.9
Sabra17G0091900 Salix brachista HOM05D001568 ORTHO05D004404 4.9e-07 57.4 63 55.6
TAR371G0241 Trochodendron aralioides HOM05D001568 ORTHO05D004404 4.9e-07 57.4 56 60.7
Glyma.18G279700 Glycine max HOM05D001568 ORTHO05D004404 6.5e-07 57.0 59 59.3
Hma1.2p1_0588F.1_g184400 Hydrangea macrophylla HOM05D001568 ORTHO05D004404 6.5e-07 57.0 59 57.6
Manes.01G107200 Manihot esculenta HOM05D001568 ORTHO05D004404 6.5e-07 57.0 63 55.6
Potri.017G109900 Populus trichocarpa HOM05D001568 ORTHO05D004404 6.5e-07 57.0 63 54.0
SalBow6G2712 Salvia bowleyana HOM05D008947 ORTHO05D010748 6.5e-07 57.0 38 81.6
CiPaw.04G004300 Carya illinoinensis HOM05D001568 ORTHO05D004404 1.9e-06 55.5 54 59.3
TAR629G2968 Trochodendron aralioides HOM05D001568 ORTHO05D004404 2.5e-06 55.1 56 58.9
Medtr7g019160 Medicago truncatula HOM05D001568 ORTHO05D004404 3.2e-06 54.7 59 55.9
CSS0005518 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 4.2e-06 54.3 58 55.2
CSS0039733 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D004404 4.2e-06 54.3 58 55.2
Eucgr.I02108 Eucalyptus grandis HOM05D001568 ORTHO05D004404 4.2e-06 54.3 61 54.1
TPR.G3300 Trifolium pratense HOM05D001568 ORTHO05D004404 5.5e-06 53.9 56 55.4
Lj1g0007549 Lotus japonicus HOM05D001568 ORTHO05D004404 7.1e-06 53.5 59 54.2
EL10Ac9g22180 Beta vulgaris HOM05D001568 ORTHO05D004404 9.3e-06 53.1 76 46.1
COL.COLO4_08509 Corchorus olitorius HOM05D001568 ORTHO05D004404 9.3e-06 53.1 56 55.4
Lalb_Chr10g0092401 Lupinus albus HOM05D001568 ORTHO05D004404 9.3e-06 53.1 59 57.6


User provided reference genes

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