Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 1.6e-32 142.1 69 100.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.3e-15 85.9 52 75.0
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 2.3e-15 85.1 56 67.9
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 3.0e-15 84.7 52 75.0
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 5.1e-15 84.0 52 73.1
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 6.6e-15 83.6 52 75.0
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 6.6e-15 83.6 52 75.0
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 6.6e-15 83.6 52 75.0
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.5e-14 82.4 52 73.1
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 1.5e-14 82.4 52 73.1
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.5e-14 82.4 52 75.0
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 4.3e-14 80.9 52 73.1
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 4.3e-14 80.9 52 73.1
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 4.3e-14 80.9 52 71.2
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 5.6e-14 80.5 52 71.2
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 7.3e-14 80.1 52 73.1
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 7.3e-14 80.1 47 78.7
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 7.3e-14 80.1 52 73.1
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 9.6e-14 79.7 56 69.6
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 9.6e-14 79.7 53 73.6
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 9.6e-14 79.7 52 71.2
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 9.6e-14 79.7 47 76.6
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.3e-13 79.3 56 69.6
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-13 79.3 52 71.2
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 1.3e-13 79.3 52 71.2
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.3e-13 79.3 52 71.2
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 1.3e-13 79.3 52 65.4
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 1.6e-13 79.0 52 71.2
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.8e-13 78.2 45 80.0
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 2.8e-13 78.2 45 80.0
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.8e-13 78.2 52 69.2
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.8e-13 78.2 52 69.2
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 2.8e-13 78.2 52 69.2
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 3.6e-13 77.8 52 71.2
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 3.6e-13 77.8 52 69.2
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 4.8e-13 77.4 56 67.9
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 4.8e-13 77.4 56 67.9
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 4.8e-13 77.4 56 67.9
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 4.8e-13 77.4 51 68.6
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 4.8e-13 77.4 52 67.3
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 6.2e-13 77.0 56 64.3
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 6.2e-13 77.0 56 67.9
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 6.2e-13 77.0 52 67.3
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 6.2e-13 77.0 52 67.3
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 6.2e-13 77.0 52 71.2
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 6.2e-13 77.0 52 65.4
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 6.2e-13 77.0 52 65.4
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 6.2e-13 77.0 45 75.6
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 8.1e-13 76.6 52 67.3
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 8.1e-13 76.6 52 67.3
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 8.1e-13 76.6 45 77.8
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 1.1e-12 76.3 52 65.4
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.1e-12 76.3 52 65.4
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 1.1e-12 76.3 52 65.4
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 1.1e-12 76.3 52 67.3
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.1e-12 76.3 52 65.4
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 1.4e-12 75.9 52 67.3
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.4e-12 75.9 52 67.3
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 2.4e-12 75.1 56 62.5
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 2.4e-12 75.1 45 75.6
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 2.4e-12 75.1 43 76.7
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 2.4e-12 75.1 45 77.8
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.1e-12 74.7 47 72.3
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 3.1e-12 74.7 56 64.3
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 4.0e-12 74.3 52 65.4
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 5.3e-12 73.9 67 59.7
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 5.3e-12 73.9 48 70.8
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 5.3e-12 73.9 45 77.8
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.3e-12 73.9 52 67.3
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 5.3e-12 73.9 52 67.3
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 1.2e-11 72.8 56 60.7
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.5e-11 72.4 48 70.8
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.5e-11 72.4 45 73.3
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.5e-11 72.4 56 60.7
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 3.4e-11 71.2 47 68.1
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 3.4e-11 71.2 52 69.2
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 3.4e-11 71.2 51 70.6
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 3.4e-11 71.2 51 70.6
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 4.5e-11 70.9 45 71.1
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 9.9e-11 69.7 52 57.7
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 2.9e-10 68.2 42 73.8
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 3.8e-10 67.8 52 57.7
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 3.8e-10 67.8 52 59.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 3.8e-10 67.8 52 57.7
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 8.4e-10 66.6 52 59.6
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 2.4e-09 65.1 51 54.9
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 7.1e-09 63.5 52 53.8
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 7.1e-09 63.5 52 53.8
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 7.1e-09 63.5 52 53.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 1.2e-08 62.8 47 57.4
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.6e-08 62.4 32 84.4
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.1e-08 62.0 52 55.8
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 2.1e-08 62.0 52 53.8
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.6e-08 60.8 52 51.9
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 1.0e-07 59.7 32 78.1
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 1.3e-07 59.3 52 57.7
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 8.7e-07 56.6 31 80.6
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 8.7e-07 56.6 31 80.6
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 2.5e-06 55.1 45 64.4
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 5.6e-06 53.9 36 66.7


User provided reference genes

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