Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00432 Erythranthe guttata HOM05D000732 ORTHO05D001037 4.2e-56 221.1 110 100.0
Migut.B00445 Erythranthe guttata HOM05D000732 ORTHO05D001037 2.4e-51 205.3 111 94.6
Peaxi162Scf00016g02837 Petunia axillaris HOM05D000732 ORTHO05D001037 1.7e-20 102.8 110 53.6
SalBow6G5380 Salvia bowleyana HOM05D000732 ORTHO05D001037 1.9e-19 99.4 105 49.5
PGSC0003DMG400025748 Solanum tuberosum HOM05D000732 ORTHO05D001037 3.2e-19 98.6 104 52.9
Oeu010442.1 Olea europaea HOM05D000732 ORTHO05D001037 4.1e-19 98.2 113 51.3
Nitab4.5_0007616g0010 Nicotiana tabacum HOM05D000732 ORTHO05D001037 7.1e-19 97.4 105 55.2
SGA_v2.0_scaffold225G43037 Striga asiatica HOM05D000732 ORTHO05D001037 9.2e-19 97.1 107 56.1
Nitab4.5_0001058g0050 Nicotiana tabacum HOM05D000732 ORTHO05D001037 2.7e-18 95.5 107 53.3
Sopen01g049380 Solanum pennellii HOM05D000732 ORTHO05D001037 2.7e-18 95.5 104 52.9
Nitab4.5_0001105g0050 Nicotiana tabacum HOM05D000732 ORTHO05D001037 4.6e-18 94.7 110 50.0
Peaxi162Scf00003g02736 Petunia axillaris HOM05D000732 ORTHO05D001037 1.0e-17 93.6 106 53.8
PGSC0003DMG400003237 Solanum tuberosum HOM05D000732 ORTHO05D001037 1.0e-17 93.6 106 50.9
Nitab4.5_0008075g0030 Nicotiana tabacum HOM05D000732 ORTHO05D001037 1.3e-17 93.2 110 50.0
RhsimUnG0124600 Rhododendron simsii HOM05D000732 ORTHO05D001037 1.3e-17 93.2 104 49.0
CAN.G606.55 Capsicum annuum HOM05D000732 ORTHO05D001037 1.7e-17 92.8 106 50.0
Actinidia00375 Actinidia chinensis HOM05D000732 ORTHO05D001037 2.3e-17 92.4 112 45.5
Rhsim11G0153400 Rhododendron simsii HOM05D000732 ORTHO05D001037 2.3e-17 92.4 104 49.0
Solyc10g049790.1 Solanum lycopersicum HOM05D000732 ORTHO05D001037 2.3e-17 92.4 102 50.0
Sopen10g020600 Solanum pennellii HOM05D000732 ORTHO05D001037 2.3e-17 92.4 102 50.0
Solyc01g107120.3 Solanum lycopersicum HOM05D000732 ORTHO05D001037 3.9e-17 91.7 104 50.0
CAN.G196.2 Capsicum annuum HOM05D000732 ORTHO05D001037 5.1e-17 91.3 101 52.5
Lj9A327T36 Lonicera japonica HOM05D000732 ORTHO05D001037 1.5e-16 89.7 104 52.9
Cc02_g19800 Coffea canephora HOM05D000732 ORTHO05D001037 3.3e-16 88.6 114 50.9
QL11p030810 Quercus lobata HOM05D000732 ORTHO05D001037 4.3e-16 88.2 101 49.5
Dinv42235 Davidia involucrata HOM05D000732 ORTHO05D001037 9.6e-16 87.0 107 46.7
CSS0009971 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 4.7e-15 84.7 112 44.6
Hma1.2p1_1773F.1_g301770 Hydrangea macrophylla HOM05D000732 ORTHO05D001037 4.7e-15 84.7 104 42.3
CSS0042950 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D001037 8.1e-15 84.0 112 44.6
unitig_21.g20719 Utricularia gibba HOM05D000732 ORTHO05D001037 1.4e-14 83.2 111 49.5
MSTRG.16681 Avicennia marina HOM05D000732 ORTHO05D001037 3.1e-14 82.0 106 49.1
Haze_10228 Corylus avellana HOM05D000732 ORTHO05D001037 1.2e-13 80.1 110 46.4
TAR376G0576 Trochodendron aralioides HOM05D000732 ORTHO05D001037 2.0e-13 79.3 104 43.3
Thecc.02G116200 Theobroma cacao HOM05D000732 ORTHO05D001037 7.6e-13 77.4 102 45.1
Cfa004632 Carpinus fangiana HOM05D000732 ORTHO05D001037 9.9e-13 77.0 110 45.5
Prupe.8G143800 Prunus persica HOM05D000732 ORTHO05D001037 2.2e-12 75.9 102 42.2
PSO541G2550 Papaver somniferum HOM05D000732 ORTHO05D001037 3.8e-12 75.1 100 43.0
Cpa.g.sc106.55 Carica papaya HOM05D000732 ORTHO05D001037 6.4e-12 74.3 104 40.4
CiPaw.05G017200 Carya illinoinensis HOM05D000732 ORTHO05D001037 6.4e-12 74.3 104 41.3
Os07g0588300 Oryza sativa ssp. japonica HOM05D000732 ORTHO05D001037 4.2e-11 71.6 113 40.7
PSO675G7134 Papaver somniferum HOM05D000732 ORTHO05D001037 4.2e-11 71.6 99 40.4
Ciclev10029833m.g Citrus clementina HOM05D000732 ORTHO05D001037 9.3e-11 70.5 103 46.6
Potri.001G294600 Populus trichocarpa HOM05D000732 ORTHO05D001037 1.6e-10 69.7 96 45.8
Sabra16G0184100 Salix brachista HOM05D000732 ORTHO05D001037 3.5e-10 68.6 96 45.8
AL3G33040 Arabidopsis lyrata HOM05D000732 ORTHO05D001037 4.6e-10 68.2 109 37.6
Gohir.A04G118500 Gossypium hirsutum HOM05D000732 ORTHO05D001037 1.0e-09 67.0 106 41.5
BraA03t13286Z Brassica rapa HOM05D000732 ORTHO05D001037 1.3e-09 66.6 103 40.8
vmacro01965 Vaccinium macrocarpon HOM05D000732 ORTHO05D001037 1.7e-09 66.2 92 40.2
A03p41320 Brassica napus HOM05D000732 ORTHO05D001037 2.3e-09 65.9 103 40.8
AT3G19610 Arabidopsis thaliana HOM05D000732 ORTHO05D001037 3.0e-09 65.5 100 43.0
Gohir.D04G160200 Gossypium hirsutum HOM05D000732 ORTHO05D001037 3.9e-09 65.1 106 40.6
Gorai.012G147600 Gossypium raimondii HOM05D000732 ORTHO05D001037 3.9e-09 65.1 106 41.5
BcaC01g03615 Brassica carinata HOM05D000732 ORTHO05D001037 5.1e-09 64.7 104 40.4
C03p50480 Brassica napus HOM05D000732 ORTHO05D001037 5.1e-09 64.7 104 40.4
RcHm_v2.0_Chr6g0253661 Rosa chinensis HOM05D000732 ORTHO05D001037 5.1e-09 64.7 102 38.2
THA.LOC104825386 Tarenaya hassleriana HOM05D000732 ORTHO05D001037 5.1e-09 64.7 101 38.6
BcaB04g19053 Brassica carinata HOM05D000732 ORTHO05D001037 6.6e-09 64.3 100 42.0
FAN27G0552 Fragaria x ananassa HOM05D000732 ORTHO05D001037 6.6e-09 64.3 104 35.6
HPP92_006067 Vanilla planifolia HOM05D000732 ORTHO05D001037 6.6e-09 64.3 109 41.3
BolC3t17338H Brassica oleracea HOM05D000732 ORTHO05D001037 8.7e-09 63.9 104 40.4
CARHR095060 Cardamine hirsuta HOM05D000732 ORTHO05D001037 8.7e-09 63.9 111 36.9
FAN20G2686 Fragaria x ananassa HOM05D000732 ORTHO05D001037 1.1e-08 63.5 108 36.1
FAN24G1245 Fragaria x ananassa HOM05D000732 ORTHO05D001037 1.1e-08 63.5 108 35.2
DCAR_001689 Daucus carota HOM05D000732 ORTHO05D001037 1.5e-08 63.2 103 35.0
PGR120G0006 Punica granatum HOM05D000732 ORTHO05D001037 1.5e-08 63.2 99 39.4
PGR142G0446 Punica granatum HOM05D000732 ORTHO05D001037 1.5e-08 63.2 99 39.4
Thhalv10022420m.g Eutrema salsugineum HOM05D000732 ORTHO05D001037 1.9e-08 62.8 101 41.6
Zm00001eb108180 Zea mays HOM05D000732 ORTHO05D001037 1.9e-08 62.8 113 38.1
Carub.0003s1947 Capsella rubella HOM05D000732 ORTHO05D001037 2.5e-08 62.4 105 38.1
Duzib132G0123 Durio zibethinus HOM05D000732 ORTHO05D001037 2.5e-08 62.4 99 38.4
FvH4_2g04240 Fragaria vesca HOM05D000732 ORTHO05D001037 2.5e-08 62.4 108 36.1
COL.COLO4_32522 Corchorus olitorius HOM05D000732 ORTHO05D001037 3.3e-08 62.0 97 39.2
Aqoxy6G02671 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 4.3e-08 61.6 102 35.3
Aqoxy6G02987 Aquilegia oxysepala HOM05D000732 ORTHO05D001037 4.3e-08 61.6 102 35.3
CDE04G1079 Ceratophyllum demersum HOM05D000732 ORTHO05D001037 7.3e-08 60.8 107 39.3
Sc08g0004530 Simmondsia chinensis HOM05D000732 ORTHO05D001037 9.6e-08 60.5 119 35.3
Sp3g17650 Schrenkiella parvula HOM05D000732 ORTHO05D001037 3.6e-07 58.5 104 38.5
Thhalv10006887m.g Eutrema salsugineum HOM05D000732 ORTHO05D001037 1.8e-06 56.2 104 32.7
CiPaw.02G051800 Carya illinoinensis HOM05D000732 ORTHO05D001037 4.0e-06 55.1 100 38.0
Lj3C50T6 Lonicera japonica HOM05D000732 ORTHO05D001037 6.9e-06 54.3 103 36.9


User provided reference genes

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