Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00385 Erythranthe guttata HOM05D004451 ORTHO05D005177 1.4e-151 539.7 290 100.0
SalBow6G6827 Salvia bowleyana HOM05D004451 ORTHO05D005177 2.5e-116 422.5 293 80.9
MSTRG.20184 Avicennia marina HOM05D004451 ORTHO05D005177 3.2e-111 405.6 290 77.6
SGA_v2.0_scaffold32G13039 Striga asiatica HOM05D004451 ORTHO05D005177 7.4e-108 394.4 290 75.2
Oeu018597.1 Olea europaea HOM05D004451 ORTHO05D005177 6.5e-104 381.3 290 74.8
MSTRG.16716 Avicennia marina HOM05D004451 ORTHO05D005177 1.9e-103 379.8 290 73.8
Oeu010397.1 Olea europaea HOM05D004451 ORTHO05D005177 3.9e-101 372.1 290 74.5
SGA_v2.0_scaffold225G43078 Striga asiatica HOM05D004451 ORTHO05D005177 9.0e-98 360.9 288 70.1
CSS0044080 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 1.2e-97 360.5 302 71.2
CSS0019678 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 7.7e-97 357.8 304 69.4
Cc02_g19230 Coffea canephora HOM05D004451 ORTHO05D005177 1.7e-96 356.7 297 70.4
Hma1.2p1_0796F.1_g219180 Hydrangea macrophylla HOM05D004451 ORTHO05D005177 1.7e-96 356.7 303 69.0
CSS0017890 Camellia sinensis var. sinensis HOM05D004451 ORTHO05D005177 6.5e-96 354.8 303 69.6
vmacro19448 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 4.2e-95 352.1 300 70.7
Actinidia00412 Actinidia chinensis HOM05D004451 ORTHO05D005177 9.4e-95 350.9 306 67.6
Actinidia17478 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.6e-94 350.1 302 69.2
Atru.chr5.2587 Acer truncatum HOM05D004451 ORTHO05D005177 4.6e-94 348.6 292 69.9
AUR62039084 Chenopodium quinoa HOM05D004451 ORTHO05D005177 6.1e-94 348.2 286 68.2
RcHm_v2.0_Chr6g0255371 Rosa chinensis HOM05D004451 ORTHO05D005177 6.1e-94 348.2 294 68.0
Thecc.02G107400 Theobroma cacao HOM05D004451 ORTHO05D005177 7.9e-94 347.8 303 67.7
Rhsim05G0088400 Rhododendron simsii HOM05D004451 ORTHO05D005177 1.4e-93 347.1 299 68.9
ECA234G3549 Erigeron canadensis HOM05D004451 ORTHO05D005177 1.8e-93 346.7 294 67.3
CANSAT25G0591 Cannabis sativa HOM05D004451 ORTHO05D005177 3.9e-93 345.5 301 68.1
Prupe.8G134600 Prunus persica HOM05D004451 ORTHO05D005177 3.9e-93 345.5 297 68.7
arahy.Tifrunner.gnm1.ann1.BMM90D Arachis hypogaea HOM05D004451 ORTHO05D005177 5.1e-93 345.1 299 68.6
AUR62010302 Chenopodium quinoa HOM05D004451 ORTHO05D005177 5.1e-93 345.1 288 68.1
CANSAT25G2876 Cannabis sativa HOM05D004451 ORTHO05D005177 8.8e-93 344.4 301 67.8
Ciclev10029016m.g Citrus clementina HOM05D004451 ORTHO05D005177 3.3e-92 342.4 294 68.0
Cpa.g.sc106.89 Carica papaya HOM05D004451 ORTHO05D005177 4.4e-92 342.0 294 69.7
arahy.Tifrunner.gnm1.ann1.S5NBXN Arachis hypogaea HOM05D004451 ORTHO05D005177 1.7e-91 340.1 299 67.6
Nitab4.5_0002815g0090 Nicotiana tabacum HOM05D004451 ORTHO05D005177 2.2e-91 339.7 294 67.7
ClCG02G006310 Citrullus lanatus HOM05D004451 ORTHO05D005177 2.8e-91 339.3 303 66.0
TAR628G0195 Trochodendron aralioides HOM05D004451 ORTHO05D005177 6.3e-91 338.2 296 66.9
Manes.07G069100 Manihot esculenta HOM05D004451 ORTHO05D005177 8.2e-91 337.8 303 65.7
GSVIVG01003161001 Vitis vinifera HOM05D004451 ORTHO05D005177 8.2e-91 337.8 298 70.1
PGSC0003DMG400025865 Solanum tuberosum HOM05D004451 ORTHO05D005177 1.1e-90 337.4 291 66.7
THA.LOC104819557 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.1e-90 337.4 302 66.2
QL11p033916 Quercus lobata HOM05D004451 ORTHO05D005177 1.8e-90 336.7 300 67.7
COL.COLO4_32599 Corchorus olitorius HOM05D004451 ORTHO05D005177 2.4e-90 336.3 298 66.1
Gohir.A13G043700 Gossypium hirsutum HOM05D004451 ORTHO05D005177 4.1e-90 335.5 293 66.9
Gorai.005G235200 Gossypium raimondii HOM05D004451 ORTHO05D005177 4.1e-90 335.5 294 66.0
CsaV3_7G008120 Cucumis sativus L. HOM05D004451 ORTHO05D005177 9.1e-90 334.3 295 66.1
Glyma.10G261800 Glycine max HOM05D004451 ORTHO05D005177 1.2e-89 334.0 292 65.8
Gohir.D13G042200 Gossypium hirsutum HOM05D004451 ORTHO05D005177 1.2e-89 334.0 293 66.6
Actinidia05493 Actinidia chinensis HOM05D004451 ORTHO05D005177 1.5e-89 333.6 293 65.5
Gorai.013G047100 Gossypium raimondii HOM05D004451 ORTHO05D005177 2.0e-89 333.2 297 65.7
Nn1g04705 Nelumbo nucifera HOM05D004451 ORTHO05D005177 2.0e-89 333.2 295 67.1
MD05G1088600 Malus domestica HOM05D004451 ORTHO05D005177 2.6e-89 332.8 297 66.7
Gohir.A03G186500 Gossypium hirsutum HOM05D004451 ORTHO05D005177 7.7e-89 331.3 296 65.9
Lj5g0008999 Lotus japonicus HOM05D004451 ORTHO05D005177 7.7e-89 331.3 298 64.8
TAR381G0562 Trochodendron aralioides HOM05D004451 ORTHO05D005177 7.7e-89 331.3 298 66.4
VMungo0720G2723 Vigna mungo HOM05D004451 ORTHO05D005177 7.7e-89 331.3 291 67.0
Duzib248G1610 Durio zibethinus HOM05D004451 ORTHO05D005177 1.7e-88 330.1 301 65.8
Glyma.20G129100 Glycine max HOM05D004451 ORTHO05D005177 1.7e-88 330.1 292 66.4
Phvul.007G040300 Phaseolus vulgaris HOM05D004451 ORTHO05D005177 1.7e-88 330.1 291 66.7
PGR142G3187 Punica granatum HOM05D004451 ORTHO05D005177 1.7e-88 330.1 301 66.1
Sed0001090 Sechium edule HOM05D004451 ORTHO05D005177 1.7e-88 330.1 303 64.4
Duzib132G0413 Durio zibethinus HOM05D004451 ORTHO05D005177 2.9e-88 329.3 303 65.0
Potri.009G096300 Populus trichocarpa HOM05D004451 ORTHO05D005177 3.8e-88 328.9 301 65.1
Lsat_1_v5_gn_5_114881 Lactuca sativa HOM05D004451 ORTHO05D005177 5.0e-88 328.6 285 68.4
Nitab4.5_0005392g0030 Nicotiana tabacum HOM05D004451 ORTHO05D005177 8.5e-88 327.8 288 67.4
Solyc01g107640.3 Solanum lycopersicum HOM05D004451 ORTHO05D005177 8.5e-88 327.8 294 64.6
Sopen01g049830 Solanum pennellii HOM05D004451 ORTHO05D005177 1.1e-87 327.4 292 65.1
Haze_10166 Corylus avellana HOM05D004451 ORTHO05D005177 1.4e-87 327.0 297 67.7
MELO3C018494.2 Cucumis melo HOM05D004451 ORTHO05D005177 1.4e-87 327.0 303 63.7
Cfa004574 Carpinus fangiana HOM05D004451 ORTHO05D005177 1.9e-87 326.6 306 65.0
Manes.10G076300 Manihot esculenta HOM05D004451 ORTHO05D005177 1.9e-87 326.6 303 64.0
Medtr1g107450 Medicago truncatula HOM05D004451 ORTHO05D005177 1.9e-87 326.6 291 65.6
HanXRQChr16g0514851 Helianthus annuus HOM05D004451 ORTHO05D005177 2.5e-87 326.2 296 64.2
Potri.001G300500 Populus trichocarpa HOM05D004451 ORTHO05D005177 3.2e-87 325.9 297 65.0
Gohir.D02G207300 Gossypium hirsutum HOM05D004451 ORTHO05D005177 7.2e-87 324.7 307 64.2
Lj9C321G12 Lonicera japonica HOM05D004451 ORTHO05D005177 9.4e-87 324.3 220 78.6
FvH4_2g05240 Fragaria vesca HOM05D004451 ORTHO05D005177 1.2e-86 323.9 295 65.4
Hund00148 Selenicereus undatus HOM05D004451 ORTHO05D005177 1.2e-86 323.9 302 63.2
EL10Ac9g22281 Beta vulgaris HOM05D004451 ORTHO05D005177 1.6e-86 323.6 287 65.9
FAN20G1574 Fragaria x ananassa HOM05D004451 ORTHO05D005177 1.6e-86 323.6 300 62.3
FAN27G3473 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.1e-86 323.2 295 64.1
Sed0013348 Sechium edule HOM05D004451 ORTHO05D005177 2.1e-86 323.2 297 64.6
Ah.01g018220 Amaranthus hybridus HOM05D004451 ORTHO05D005177 2.7e-86 322.8 304 62.2
MD10G1096700 Malus domestica HOM05D004451 ORTHO05D005177 2.7e-86 322.8 294 64.6
Hund06320 Selenicereus undatus HOM05D004451 ORTHO05D005177 4.7e-86 322.0 303 64.4
PSO210G2671 Papaver somniferum HOM05D004451 ORTHO05D005177 6.1e-86 321.6 245 74.3
TWI31G0226 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 1.0e-85 320.9 303 63.4
TWI79G0876 Tripterygium wilfordii HOM05D004451 ORTHO05D005177 3.0e-85 319.3 301 64.1
Aqoxy5G01146 Aquilegia oxysepala HOM05D004451 ORTHO05D005177 3.9e-85 318.9 276 67.0
FAN24G2858 Fragaria x ananassa HOM05D004451 ORTHO05D005177 6.7e-85 318.2 291 64.9
Lalb_Chr02g0145321 Lupinus albus HOM05D004451 ORTHO05D005177 6.7e-85 318.2 216 79.2
Psat6g219200 Pisum sativum HOM05D004451 ORTHO05D005177 6.7e-85 318.2 293 64.2
PSO170G0588 Papaver somniferum HOM05D004451 ORTHO05D005177 8.8e-85 317.8 294 65.6
CiPaw.05G011200 Carya illinoinensis HOM05D004451 ORTHO05D005177 2.0e-84 316.6 291 64.3
FAN15G2242 Fragaria x ananassa HOM05D004451 ORTHO05D005177 2.6e-84 316.2 307 62.2
C07p08470 Brassica napus HOM05D004451 ORTHO05D005177 5.7e-84 315.1 215 79.1
BolC7t41261H Brassica oleracea HOM05D004451 ORTHO05D005177 5.7e-84 315.1 215 79.1
Aa31LG8G13140 Aethionema arabicum HOM05D004451 ORTHO05D005177 7.4e-84 314.7 248 71.8
Dinv15761 Davidia involucrata HOM05D004451 ORTHO05D005177 7.4e-84 314.7 272 67.3
BcaB03g16278 Brassica carinata HOM05D004451 ORTHO05D005177 1.7e-83 313.5 215 78.6
BcaC06g36051 Brassica carinata HOM05D004451 ORTHO05D005177 1.7e-83 313.5 215 78.6
HanXRQChr10g0292341 Helianthus annuus HOM05D004451 ORTHO05D005177 1.7e-83 313.5 282 66.3
Peaxi162Scf00016g02324 Petunia axillaris HOM05D004451 ORTHO05D005177 2.8e-83 312.8 293 64.2
A07p05320 Brassica napus HOM05D004451 ORTHO05D005177 3.7e-83 312.4 248 71.8
BraA07t28325Z Brassica rapa HOM05D004451 ORTHO05D005177 3.7e-83 312.4 248 71.8
Lalb_Chr06g0165471 Lupinus albus HOM05D004451 ORTHO05D005177 3.7e-83 312.4 288 63.9
BcaB08g34587 Brassica carinata HOM05D004451 ORTHO05D005177 4.8e-83 312.0 304 62.8
Sp3g28570 Schrenkiella parvula HOM05D004451 ORTHO05D005177 6.3e-83 311.6 216 78.2
Thhalv10022775m.g Eutrema salsugineum HOM05D004451 ORTHO05D005177 1.8e-82 310.1 215 77.7
THA.LOC104807244 Tarenaya hassleriana HOM05D004451 ORTHO05D005177 1.8e-82 310.1 281 64.1
Carub.0003s2912 Capsella rubella HOM05D004451 ORTHO05D005177 5.3e-82 308.5 215 77.7
A09p10690 Brassica napus HOM05D004451 ORTHO05D005177 9.1e-82 307.8 254 68.5
Ca_11078_v3 Cicer arietinum L. HOM05D004451 ORTHO05D005177 9.1e-82 307.8 294 63.9
BcaB07g31794 Brassica carinata HOM05D004451 ORTHO05D005177 1.2e-81 307.4 303 62.4
AT2G15290 Arabidopsis thaliana HOM05D004451 ORTHO05D005177 1.6e-81 307.0 301 63.1
BolC9t54158H Brassica oleracea HOM05D004451 ORTHO05D005177 1.6e-81 307.0 268 67.2
Nn5g30419 Nelumbo nucifera HOM05D004451 ORTHO05D005177 2.0e-81 306.6 294 62.9
CARHR105660 Cardamine hirsuta HOM05D004451 ORTHO05D005177 2.6e-81 306.2 297 63.3
AL3G47010 Arabidopsis lyrata HOM05D004451 ORTHO05D005177 4.5e-81 305.4 300 62.0
DCAR_001641 Daucus carota HOM05D004451 ORTHO05D005177 5.9e-81 305.1 196 80.6
C09p12690 Brassica napus HOM05D004451 ORTHO05D005177 1.7e-80 303.5 268 67.2
CiPaw.06G169600 Carya illinoinensis HOM05D004451 ORTHO05D005177 2.9e-80 302.8 299 61.5
CDE04G0259 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 2.9e-80 302.8 201 79.6
Rhsim11G0160300 Rhododendron simsii HOM05D004451 ORTHO05D005177 2.1e-78 296.6 193 81.3
Eucgr.E02954 Eucalyptus grandis HOM05D004451 ORTHO05D005177 2.7e-78 296.2 268 63.4
Sabra09G0074000 Salix brachista HOM05D004451 ORTHO05D005177 2.7e-78 296.2 351 54.1
unitig_22.g5194 Utricularia gibba HOM05D004451 ORTHO05D005177 2.7e-78 296.2 293 58.7
vmacro19524 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 2.3e-77 293.1 322 58.4
BcaC06g31580 Brassica carinata HOM05D004451 ORTHO05D005177 2.0e-76 290.0 194 79.9
Sabra16G0188700 Salix brachista HOM05D004451 ORTHO05D005177 7.5e-76 288.1 362 52.8
ECA240G4367 Erigeron canadensis HOM05D004451 ORTHO05D005177 5.3e-74 282.0 278 61.9
Sc17g0003020 Simmondsia chinensis HOM05D004451 ORTHO05D005177 2.7e-73 279.6 263 64.6
HPP92_004770 Vanilla planifolia HOM05D004451 ORTHO05D005177 7.7e-73 278.1 215 69.8
SEGI_03021 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 2.5e-71 273.1 224 67.4
Os06g0638100 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.2e-70 270.8 200 72.5
BraA09t36712Z Brassica rapa HOM05D004451 ORTHO05D005177 3.6e-70 269.2 318 53.5
Os02g0187600 Oryza sativa ssp. japonica HOM05D004451 ORTHO05D005177 1.0e-69 267.7 274 58.8
Zm00001eb206410 Zea mays HOM05D004451 ORTHO05D005177 3.0e-69 266.2 185 73.0
DCAR_021989 Daucus carota HOM05D004451 ORTHO05D005177 2.6e-68 263.1 254 60.2
Pp3c27_4260 Physcomitrium patens HOM05D004451 ORTHO05D005177 1.3e-67 260.8 208 67.3
Pp3c10_9500 Physcomitrium patens HOM05D004451 ORTHO05D005177 2.8e-67 259.6 209 66.0
unitig_8.g3679 Utricularia gibba HOM05D004451 ORTHO05D005177 1.8e-66 256.9 313 52.1
Pp3c1_21740 Physcomitrium patens HOM05D004451 ORTHO05D005177 5.4e-66 255.4 246 60.6
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.2e-65 254.2 229 66.4
ATR0691G207 Amborella trichopoda HOM05D004451 ORTHO05D005177 3.5e-65 252.7 259 57.1
Zm00001eb387350 Zea mays HOM05D004451 ORTHO05D005177 3.5e-65 252.7 277 54.9
Mapoly0049s0087 Marchantia polymorpha HOM05D004451 ORTHO05D005177 1.3e-64 250.8 215 64.7
AagrBONN_evm.TU.Sc2ySwM_344.1281 Anthoceros agrestis HOM05D004451 ORTHO05D005177 5.5e-63 245.4 252 55.6
SMO118G0560 Selaginella moellendorffii HOM05D004451 ORTHO05D005177 3.0e-53 213.0 181 61.9
CBR_g39267 Chara braunii HOM05D004451 ORTHO05D005177 4.0e-53 212.6 210 58.1
CDE06G1648 Ceratophyllum demersum HOM05D004451 ORTHO05D005177 1.3e-48 197.6 137 74.5
vmacro02006 Vaccinium macrocarpon HOM05D004451 ORTHO05D005177 3.3e-47 193.0 195 60.5
SHI05289 Sapria himalayana HOM05D004451 ORTHO05D005177 1.4e-45 187.6 183 57.4
TAR381G0937 Trochodendron aralioides HOM05D004451 ORTHO05D005177 1.6e-38 164.1 108 84.3
MCO10G127 Micromonas commoda HOM05D004451 ORTHO05D005177 3.4e-36 156.4 204 46.6
Zm00001eb234680 Zea mays HOM05D004451 ORTHO05D005177 2.1e-33 147.1 290 37.9
CAN.G1231.10 Capsicum annuum HOM05D004451 ORTHO05D005177 3.3e-31 139.8 89 79.8
SEGI_11302 Sequoiadendron giganteum HOM05D004451 ORTHO05D005177 4.7e-30 136.0 117 62.4
Cre10.g454734 Chlamydomonas reinhardtii HOM05D000133 ORTHO05D005177 1.2e-28 131.3 203 39.9
PRCOL_00004645 Prasinoderma coloniale HOM05D004451 ORTHO05D005177 1.0e-24 118.2 206 39.8
CAN.G3385.1 Capsicum annuum HOM05D004451 ORTHO05D005177 3.3e-23 113.2 79 81.0
HPP92_008279 Vanilla planifolia HOM05D004451 ORTHO05D005177 4.7e-22 109.4 100 59.0
HanXRQChr01g0018911 Helianthus annuus HOM05D004451 ORTHO05D005177 4.4e-20 102.8 136 47.1
HanXRQChr17g0567381 Helianthus annuus HOM05D004451 ORTHO05D005177 1.3e-19 101.3 136 46.3
CBR_g28861 Chara braunii HOM05D004451 ORTHO05D009492 3.8e-19 99.8 87 58.6
Cre11.g467759 Chlamydomonas reinhardtii HOM05D027551 ORTHO05D005177 3.1e-13 80.1 159 35.2
HanXRQChr05g0151971 Helianthus annuus HOM05D002664 ORTHO05D002974 1.8e-08 64.3 103 46.6


User provided reference genes

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