Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 0.0e+00 1141.7 575 100.0
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 1.6e-292 1008.8 576 87.8
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 1.6e-292 1008.8 575 88.3
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 7.4e-277 956.8 581 82.6
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 1.7e-273 945.7 578 81.0
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 1.7e-273 945.7 568 82.4
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.5e-272 941.8 572 81.8
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 9.4e-272 939.9 572 81.6
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 2.7e-271 938.3 578 80.1
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 4.6e-271 937.6 583 80.8
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 6.1e-271 937.2 579 81.0
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 1.5e-269 932.6 584 79.8
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 1.5e-269 932.6 544 83.3
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 4.3e-269 931.0 549 83.6
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 8.2e-268 926.8 547 81.7
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 3.1e-267 924.9 518 87.3
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 6.9e-267 923.7 547 82.6
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 9.1e-267 923.3 546 82.6
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 9.1e-267 923.3 573 80.8
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 9.1e-267 923.3 579 79.6
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 2.6e-266 921.8 581 79.2
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 1.7e-265 919.1 568 80.1
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 6.5e-265 917.1 620 75.5
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 8.5e-265 916.8 582 78.0
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 8.5e-265 916.8 545 82.4
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 1.1e-264 916.4 578 78.5
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 2.5e-264 915.2 563 81.2
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 3.2e-264 914.8 546 82.8
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 5.5e-264 914.1 546 82.1
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 5.5e-264 914.1 549 80.9
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 9.4e-264 913.3 578 79.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-263 912.9 578 79.4
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 2.1e-263 912.1 578 79.2
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 4.7e-263 911.0 547 81.0
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 1.4e-262 909.4 578 79.1
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 1.4e-262 909.4 525 84.4
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.8e-262 909.1 525 84.6
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 5.1e-262 907.5 547 80.4
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 5.1e-262 907.5 522 85.1
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 6.7e-262 907.1 522 84.9
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 1.5e-261 906.0 578 78.0
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 1.5e-261 906.0 684 70.3
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 2.0e-261 905.6 521 85.0
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 2.6e-261 905.2 546 82.1
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 4.4e-261 904.4 547 80.3
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 4.4e-261 904.4 544 81.8
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 7.4e-261 903.7 578 77.0
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 7.4e-261 903.7 555 80.7
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 9.7e-261 903.3 579 76.7
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.8e-260 901.7 578 77.5
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 2.8e-260 901.7 557 80.6
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 4.8e-260 901.0 522 84.5
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 8.2e-260 900.2 544 81.4
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 1.4e-259 899.4 546 81.3
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 1.8e-259 899.0 536 82.1
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 9.1e-259 896.7 547 79.2
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 1.5e-258 896.0 570 76.7
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 2.0e-258 895.6 572 78.0
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.6e-258 895.2 541 80.6
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 4.5e-258 894.4 579 78.4
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 5.9e-258 894.0 546 79.3
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 1.3e-257 892.9 580 77.4
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 1.3e-257 892.9 547 79.7
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 2.2e-257 892.1 561 80.4
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 2.9e-257 891.7 574 77.2
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 5.0e-257 891.0 520 84.2
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 1.1e-256 889.8 585 74.9
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 1.5e-256 889.4 566 77.6
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.2e-256 888.3 508 85.6
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 3.2e-256 888.3 541 79.9
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 7.2e-256 887.1 566 77.4
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 7.2e-256 887.1 580 77.4
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 9.4e-256 886.7 549 78.5
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 9.4e-256 886.7 546 79.5
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 6.1e-255 884.0 549 78.1
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 8.0e-255 883.6 543 77.7
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 1.0e-254 883.2 566 77.0
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 1.8e-254 882.5 586 73.5
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 2.3e-254 882.1 548 77.9
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 3.0e-254 881.7 546 78.0
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 3.9e-254 881.3 588 74.0
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 3.9e-254 881.3 518 83.2
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 6.7e-254 880.6 563 76.9
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 8.8e-254 880.2 590 73.9
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 2.0e-253 879.0 546 78.4
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 5.7e-253 877.5 591 73.1
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 2.8e-252 875.2 569 75.6
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.7e-252 874.8 565 77.9
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 5.3e-251 870.9 571 74.4
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 1.5e-248 862.8 551 77.0
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 3.4e-245 851.7 563 76.7
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 2.8e-244 848.6 583 73.1
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 4.8e-244 847.8 466 88.2
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 9.1e-243 843.6 546 76.4
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 6.8e-238 827.4 586 70.3
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 3.4e-237 825.1 541 75.0
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.3e-233 813.1 499 81.6
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 1.9e-232 809.3 540 73.1
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.0e-230 803.5 518 77.4
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 2.2e-228 795.8 468 82.9
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 8.3e-228 793.9 541 71.3
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 8.3e-228 793.9 491 80.2
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.7e-223 778.1 468 79.9
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.2e-221 773.5 439 86.1
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.9e-219 766.1 465 80.9
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 9.2e-219 763.8 540 70.9
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 2.5e-216 755.7 443 83.3
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 5.1e-201 704.9 538 65.4
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 6.6e-193 677.9 548 61.1
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 1.5e-184 650.2 462 70.8
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 3.2e-179 632.5 569 61.5
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 2.2e-172 609.8 527 59.0
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-170 604.0 565 54.2
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 3.2e-155 552.7 447 60.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 2.2e-151 540.0 517 53.4
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 2.1e-138 496.9 332 74.1
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.7e-125 453.4 281 80.4
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.7e-84 317.8 254 59.8
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 6.0e-77 292.7 158 87.3
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 1.1e-54 218.8 498 30.3
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 5.5e-38 163.3 208 48.1
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 4.1e-33 147.1 80 88.8
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.9e-30 138.3 495 26.3
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 2.1e-21 108.2 66 74.2
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 4.7e-21 107.1 122 54.9
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 1.7e-18 98.6 75 62.7
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 5.9e-08 63.5 30 96.7
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 1.0e-07 62.8 369 23.6
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 5.0e-07 60.5 297 25.3


User provided reference genes

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