Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00353 Erythranthe guttata HOM05D011234 ORTHO05D003195 1.1e-139 500.0 251 100.0
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 7.2e-51 204.9 248 48.8
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 8.5e-44 181.4 254 44.9
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 6.1e-42 175.3 252 45.6
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 5.7e-32 142.1 232 43.5
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 1.9e-27 127.1 189 39.7
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 5.7e-24 115.5 248 35.5
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 8.3e-23 111.7 257 37.7
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 4.5e-21 105.9 240 35.8
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 5.9e-21 105.5 251 34.7
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 2.3e-20 103.6 246 35.4
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 5.6e-19 99.0 251 35.1
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.6e-18 97.4 248 31.0
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 2.1e-18 97.1 225 34.7
MSTRG.5362 Avicennia marina HOM05D011234 ORTHO05D003195 1.0e-17 94.7 218 35.3
PGSC0003DMG401025788 Solanum tuberosum HOM05D011234 ORTHO05D003195 4.4e-16 89.4 234 32.9
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 7.5e-16 88.6 244 31.6
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 1.7e-15 87.4 274 30.7
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.7e-15 87.4 260 33.8
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 3.2e-14 83.2 257 31.1
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 4.1e-14 82.8 259 30.5
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 7.0e-14 82.0 226 31.0
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 9.2e-14 81.6 239 31.8
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 9.2e-14 81.6 239 33.9
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.6e-13 80.9 248 32.7
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 2.0e-13 80.5 258 31.4
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.5e-13 79.7 250 32.0
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 4.6e-13 79.3 245 31.8
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 5.9e-13 79.0 218 33.9
Sopen10g021380 Solanum pennellii HOM05D011234 ORTHO05D003195 5.9e-13 79.0 221 34.4
Solyc10g050220.2 Solanum lycopersicum HOM05D011234 ORTHO05D003195 1.3e-12 77.8 240 32.9
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 1.7e-12 77.4 199 31.7
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 5.0e-12 75.9 196 32.1
Lsat_1_v5_gn_9_109780 Lactuca sativa HOM05D003465 ORTHO05D004034 6.6e-12 75.5 123 40.7
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 8.6e-12 75.1 243 30.5
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 1.1e-11 74.7 201 29.9
Atru.chr5.2692 Acer truncatum HOM05D003792 ORTHO05D003195 2.5e-11 73.6 233 29.2
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 5.6e-11 72.4 255 29.4
Nitab4.5_0002543g0100 Nicotiana tabacum HOM05D011234 ORTHO05D003195 5.6e-11 72.4 214 33.6
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 9.5e-11 71.6 198 30.8
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 9.5e-11 71.6 200 31.0
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 1.2e-10 71.2 210 31.9
FAN20G1193 Fragaria x ananassa HOM05D025254 ORTHO05D003195 1.6e-10 70.9 253 28.9
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 1.6e-10 70.9 226 32.7
Nitab4.5_0007480g0060 Nicotiana tabacum HOM05D011234 ORTHO05D003195 2.1e-10 70.5 264 30.7
THA.LOC104814167 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 2.1e-10 70.5 231 30.3
unitig_21.g20741 Utricularia gibba HOM05D046614 ORTHO05D051510 2.1e-10 70.5 192 30.7
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 2.8e-10 70.1 242 30.6
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 4.7e-10 69.3 125 33.6
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 4.7e-10 69.3 196 31.1
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 4.7e-10 69.3 205 31.7
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 4.7e-10 69.3 241 29.5
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 8.0e-10 68.6 247 30.4
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 1.4e-09 67.8 215 28.8
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 1.8e-09 67.4 211 31.3
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 2.3e-09 67.0 246 28.9
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 4.0e-09 66.2 243 31.7
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 4.0e-09 66.2 200 29.0
ClCG02G005970 Citrullus lanatus HOM05D003792 ORTHO05D003195 8.9e-09 65.1 244 29.5
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.2e-08 64.7 250 31.2
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 1.5e-08 64.3 206 29.1
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 1.5e-08 64.3 206 29.1
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.5e-08 64.3 198 30.8
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 1.5e-08 64.3 211 29.9
FAN27G2730 Fragaria x ananassa HOM05D025254 ORTHO05D003195 2.0e-08 63.9 257 29.2
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 2.0e-08 63.9 232 25.9
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 2.6e-08 63.5 224 29.0
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.4e-08 63.2 259 29.7
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 3.4e-08 63.2 196 31.1
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 5.8e-08 62.4 233 30.5
FAN15G2062 Fragaria x ananassa HOM05D025254 ORTHO05D003195 5.8e-08 62.4 254 28.0
Peaxi162Scf00003g02336 Petunia axillaris HOM05D011234 ORTHO05D003195 5.8e-08 62.4 172 32.6
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 7.5e-08 62.0 188 30.3
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 7.5e-08 62.0 244 27.9
FvH4_2g05920 Fragaria vesca HOM05D025254 ORTHO05D003195 7.5e-08 62.0 256 28.1
Lalb_Chr05g0219211 Lupinus albus HOM05D003792 ORTHO05D003195 7.5e-08 62.0 262 29.8
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 9.8e-08 61.6 234 27.4
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 9.8e-08 61.6 260 30.8
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.7e-07 60.8 273 28.6
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 2.2e-07 60.5 208 29.8
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.2e-07 60.5 210 28.1
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 2.9e-07 60.1 234 30.3
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 2.9e-07 60.1 234 30.3
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 2.9e-07 60.1 208 28.8
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 2.9e-07 60.1 152 30.3
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 2.9e-07 60.1 123 37.4
Ciclev10029147m.g Citrus clementina HOM05D003792 ORTHO05D003195 3.7e-07 59.7 243 28.8
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 3.7e-07 59.7 238 30.7
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 3.7e-07 59.7 235 28.9
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.7e-07 59.7 122 36.1
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 4.9e-07 59.3 235 27.2
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 4.9e-07 59.3 211 29.9
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 6.4e-07 58.9 204 27.5
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 6.4e-07 58.9 211 30.3
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 6.4e-07 58.9 251 28.3
Lalb_Chr09g0328351 Lupinus albus HOM05D003792 ORTHO05D003195 6.4e-07 58.9 221 29.9
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 6.4e-07 58.9 221 27.6
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 8.3e-07 58.5 208 29.3
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 1.1e-06 58.2 209 30.6
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 1.1e-06 58.2 247 27.9
Gohir.A01G007200 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.4e-06 57.8 243 28.0
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.9e-06 57.4 240 26.7
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.9e-06 57.4 208 28.8
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 1.9e-06 57.4 189 31.7
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 1.9e-06 57.4 240 28.8
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 1.9e-06 57.4 240 28.8
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 2.4e-06 57.0 210 26.7
Potri.009G101400 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.4e-06 57.0 237 32.5
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 2.4e-06 57.0 235 25.5
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 3.2e-06 56.6 216 29.2
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 3.2e-06 56.6 210 26.7
CARHR181240 Cardamine hirsuta HOM05D003792 ORTHO05D003195 3.2e-06 56.6 192 30.2
unitig_26.g10237 Utricularia gibba HOM05D055086 ORTHO05D051519 3.2e-06 56.6 56 55.4
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 4.1e-06 56.2 125 32.8
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.1e-06 56.2 208 28.8
Carub.0007s0642 Capsella rubella HOM05D009953 ORTHO05D003195 7.0e-06 55.5 215 28.8
MELO3C018454.2 Cucumis melo HOM05D003792 ORTHO05D003195 9.2e-06 55.1 240 26.7
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 9.2e-06 55.1 197 26.4
Lj5C209G18 Lonicera japonica HOM05D003792 ORTHO05D003195 9.2e-06 55.1 162 32.1
Sed0006191 Sechium edule HOM05D003792 ORTHO05D003195 9.2e-06 55.1 241 27.4


User provided reference genes

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