Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 7.6e-109 397.1 194 100.0
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 1.0e-76 290.4 196 74.5
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 4.2e-67 258.5 198 70.7
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 2.3e-65 252.7 190 66.8
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 1.3e-63 246.9 193 67.4
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 7.7e-61 237.7 163 71.2
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.7e-60 236.5 201 61.2
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.1e-59 233.8 200 62.0
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 3.2e-59 232.3 192 63.5
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 2.7e-58 229.2 180 64.4
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 8.0e-58 227.6 193 60.6
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 8.0e-58 227.6 198 61.6
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 2.3e-57 226.1 208 59.6
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 5.2e-57 224.9 211 59.7
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 4.4e-56 221.9 207 58.0
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 7.5e-56 221.1 200 60.5
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 3.7e-55 218.8 195 58.5
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.1e-54 215.7 204 61.3
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 3.1e-54 215.7 199 58.3
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 5.9e-53 211.5 203 56.7
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 3.8e-52 208.8 178 64.6
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 5.0e-52 208.4 174 62.1
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 6.6e-52 208.0 200 55.0
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 1.1e-51 207.2 178 61.8
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.1e-51 207.2 235 50.2
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 1.1e-51 207.2 204 56.4
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.5e-51 206.8 184 60.9
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 4.3e-51 205.3 198 57.6
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 4.3e-51 205.3 141 69.5
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 4.3e-51 205.3 141 69.5
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 5.6e-51 204.9 187 59.4
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.1e-50 203.0 195 56.4
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 2.8e-50 202.6 171 62.0
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 3.6e-50 202.2 178 58.4
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 1.0e-49 200.7 207 55.6
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 4.0e-49 198.7 196 57.7
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 4.0e-49 198.7 196 57.7
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 8.9e-49 197.6 202 55.9
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 1.2e-48 197.2 196 57.1
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 1.2e-48 197.2 200 55.5
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 1.5e-48 196.8 197 57.4
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.6e-48 196.1 176 56.8
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 3.4e-48 195.7 186 55.9
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 3.4e-48 195.7 184 56.5
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 4.4e-48 195.3 196 56.6
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 7.5e-48 194.5 206 53.9
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.3e-47 193.7 193 53.9
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 2.2e-47 193.0 188 56.9
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 4.9e-47 191.8 198 53.5
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 6.4e-47 191.4 186 55.9
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 8.3e-47 191.0 195 53.3
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.8e-46 189.9 136 65.4
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 4.1e-46 188.7 186 54.8
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 5.4e-46 188.3 198 53.0
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 7.0e-46 188.0 186 54.8
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 1.2e-45 187.2 197 53.3
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.2e-45 187.2 195 54.4
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 2.0e-45 186.4 202 50.0
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 2.7e-45 186.0 172 59.3
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 7.8e-45 184.5 197 55.8
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 1.0e-44 184.1 209 50.7
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 1.0e-44 184.1 193 55.4
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 3.0e-44 182.6 206 50.5
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 6.6e-44 181.4 195 53.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 6.6e-44 181.4 182 56.0
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 8.6e-44 181.0 200 53.5
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 1.1e-43 180.6 208 51.0
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 1.1e-43 180.6 190 51.1
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 1.9e-43 179.9 202 52.0
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.3e-43 179.1 124 64.5
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 7.3e-43 177.9 204 50.0
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 9.5e-43 177.6 192 53.6
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 2.8e-42 176.0 91 83.5
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 6.2e-42 174.9 199 49.7
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 1.0e-41 174.1 100 75.0
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.3e-41 172.9 183 53.6
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 5.2e-41 171.8 174 54.0
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 6.8e-41 171.4 182 53.3
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 1.2e-40 170.6 180 51.7
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 3.4e-40 169.1 122 64.8
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 4.4e-40 168.7 178 52.2
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 4.4e-40 168.7 139 55.4
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 5.8e-40 168.3 182 52.7
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 9.8e-40 167.5 169 53.8
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.3e-39 167.2 170 54.7
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.7e-39 166.8 169 55.0
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 2.2e-39 166.4 179 49.2
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 3.7e-39 165.6 171 51.5
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.4e-38 163.7 178 50.0
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 7.0e-38 161.4 131 61.1
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 1.7e-36 156.8 175 50.3
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 5.0e-36 155.2 197 43.7
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 3.3e-35 152.5 188 48.9
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.3e-33 146.4 75 84.0
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 2.9e-31 139.4 138 53.6
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 1.1e-30 137.5 111 59.5
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.1e-30 135.6 154 51.3
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.2e-29 134.0 158 51.3
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 2.7e-29 132.9 93 65.6
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 7.8e-29 131.3 196 39.8
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 3.6e-26 122.5 105 49.5
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 8.1e-26 121.3 209 42.6
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 1.4e-25 120.6 100 54.0
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 3.4e-24 115.9 92 55.4
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 6.4e-23 111.7 138 43.5
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 5.4e-22 108.6 198 38.4
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 3.5e-21 105.9 125 47.2
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 3.0e-20 102.8 143 44.8
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 3.9e-20 102.4 139 48.2
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.4e-17 94.0 133 46.6
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 2.6e-16 89.7 68 64.7
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.2e-15 86.7 67 56.7
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 2.1e-13 80.1 133 41.4
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 6.2e-10 68.6 137 38.0
Cre07.g339200 Chlamydomonas reinhardtii HOM05D007022 ORTHO05D008868 1.3e-07 60.8 62 38.7


User provided reference genes

Program Settings