Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00337 Erythranthe guttata HOM05D005412 ORTHO05D006096 3.1e-47 191.4 96 100.0
Potri.009G102900 Populus trichocarpa HOM05D005412 ORTHO05D006096 4.4e-09 64.7 69 50.7
Sabra09G0078800 Salix brachista HOM05D005412 ORTHO05D006096 2.2e-08 62.4 69 49.3
BcaB06g25975 Brassica carinata HOM05D005412 ORTHO05D006096 1.1e-07 60.1 70 45.7
CiPaw.05G051900 Carya illinoinensis HOM05D005412 ORTHO05D006096 1.4e-07 59.7 69 46.4
FAN15G2385 Fragaria x ananassa HOM05D005412 ORTHO05D006096 1.4e-07 59.7 70 47.1
unitig_21.g20750 Utricularia gibba HOM05D005412 ORTHO05D006096 1.4e-07 59.7 68 48.5
BcaNung06981 Brassica carinata HOM05D005412 ORTHO05D006096 1.9e-07 59.3 83 43.4
A05p30450 Brassica napus HOM05D005412 ORTHO05D006096 1.9e-07 59.3 83 43.4
C05p46050 Brassica napus HOM05D005412 ORTHO05D006096 1.9e-07 59.3 83 43.4
BolC5t33332H Brassica oleracea HOM05D005412 ORTHO05D006096 1.9e-07 59.3 83 43.4
BraA05t21884Z Brassica rapa HOM05D005412 ORTHO05D006096 1.9e-07 59.3 83 43.4
Duzib052G1101 Durio zibethinus HOM05D005412 ORTHO05D006096 1.9e-07 59.3 70 45.7
Migut.B00339 Erythranthe guttata HOM05D005412 ORTHO05D006096 1.9e-07 59.3 74 47.3
RcHm_v2.0_Chr6g0256971 Rosa chinensis HOM05D005412 ORTHO05D006096 1.9e-07 59.3 70 47.1
PGSC0003DMG400025793 Solanum tuberosum HOM05D005412 ORTHO05D006096 2.4e-07 58.9 69 47.8
Cpa.g.sc62.21 Carica papaya HOM05D005412 ORTHO05D006096 3.2e-07 58.5 70 44.3
CiPaw.06G143300 Carya illinoinensis HOM05D005412 ORTHO05D006096 3.2e-07 58.5 69 46.4
Solyc01g108160.3 Solanum lycopersicum HOM05D005412 ORTHO05D006096 4.2e-07 58.2 77 44.2
AT3G19190 Arabidopsis thaliana HOM05D005412 ORTHO05D006096 5.4e-07 57.8 66 47.0
Ciclev10027665m.g Citrus clementina HOM05D005412 ORTHO05D006096 5.4e-07 57.8 66 45.5
FvH4_2g06220 Fragaria vesca HOM05D005412 ORTHO05D006096 5.4e-07 57.8 70 45.7
FAN20G2783 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.4e-07 57.8 70 45.7
FAN24G2004 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.4e-07 57.8 70 45.7
FAN27G2299 Fragaria x ananassa HOM05D005412 ORTHO05D006096 5.4e-07 57.8 70 45.7
Sabra04G0093700 Salix brachista HOM05D005412 ORTHO05D006096 7.1e-07 57.4 70 45.7
AL3G32570 Arabidopsis lyrata HOM05D005412 ORTHO05D006096 9.3e-07 57.0 80 43.8
Carub.0003s1902 Capsella rubella HOM05D005412 ORTHO05D006096 9.3e-07 57.0 82 42.7
COL.COLO4_32667 Corchorus olitorius HOM05D005412 ORTHO05D006096 9.3e-07 57.0 69 46.4
Gorai.005G238500 Gossypium raimondii HOM05D005412 ORTHO05D006096 9.3e-07 57.0 70 45.7
Medtr4g086370 Medicago truncatula HOM05D005412 ORTHO05D006096 9.3e-07 57.0 78 42.3
Nitab4.5_0003080g0090 Nicotiana tabacum HOM05D005412 ORTHO05D006096 9.3e-07 57.0 70 47.1
Peaxi162Scf00016g01825 Petunia axillaris HOM05D005412 ORTHO05D006096 9.3e-07 57.0 78 43.6
THA.LOC104800351 Tarenaya hassleriana HOM05D005412 ORTHO05D006096 9.3e-07 57.0 83 43.4
TWI79G0096 Tripterygium wilfordii HOM05D005412 ORTHO05D006096 9.3e-07 57.0 70 42.9
Nitab4.5_0003503g0010 Nicotiana tabacum HOM05D005412 ORTHO05D006096 1.2e-06 56.6 78 43.6
Potri.004G141700 Populus trichocarpa HOM05D005412 ORTHO05D006096 1.2e-06 56.6 69 46.4
Sopen01g050390 Solanum pennellii HOM05D005412 ORTHO05D006096 1.2e-06 56.6 77 42.9
Thecc.02G099500 Theobroma cacao HOM05D005412 ORTHO05D006096 1.2e-06 56.6 69 46.4
CAN.G1041.23 Capsicum annuum HOM05D005412 ORTHO05D006096 1.6e-06 56.2 78 42.3
CDE02G1280 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 1.6e-06 56.2 73 41.1
HPP92_028322 Vanilla planifolia HOM05D005412 ORTHO05D006096 1.6e-06 56.2 74 45.9
VMungo0251G1021 Vigna mungo HOM05D005412 ORTHO05D006096 1.6e-06 56.2 78 39.7
CARHR094600 Cardamine hirsuta HOM05D005412 ORTHO05D006096 2.1e-06 55.8 83 41.0
Dinv23614 Davidia involucrata HOM05D005412 ORTHO05D006096 2.1e-06 55.8 73 43.8
Thhalv10019879m.g Eutrema salsugineum HOM05D005412 ORTHO05D006096 2.1e-06 55.8 83 41.0
Prupe.8G123400 Prunus persica HOM05D005412 ORTHO05D006096 2.1e-06 55.8 69 44.9
Sp3g17260 Schrenkiella parvula HOM05D005412 ORTHO05D006096 2.1e-06 55.8 83 41.0
SGA_v2.0_scaffold90G27665 Striga asiatica HOM05D005412 ORTHO05D006096 2.1e-06 55.8 70 44.3
CDE09G1352 Ceratophyllum demersum HOM05D005412 ORTHO05D006096 4.6e-06 54.7 70 41.4
Glyma.02G133400 Glycine max HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 43.5
Glyma.07G211600 Glycine max HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 43.5
Lj4g0027932 Lotus japonicus HOM05D005412 ORTHO05D006096 4.6e-06 54.7 78 41.0
Lalb_Chr09g0328271 Lupinus albus HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 44.9
MD10G1093800 Malus domestica HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 43.5
Manes.10G065500 Manihot esculenta HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 42.0
Phvul.003G295800 Phaseolus vulgaris HOM05D005412 ORTHO05D006096 4.6e-06 54.7 69 43.5
Atru.chr5.2730 Acer truncatum HOM05D005412 ORTHO05D006096 6.0e-06 54.3 69 42.0
Ca_18676_v3 Cicer arietinum L. HOM05D005412 ORTHO05D006096 6.0e-06 54.3 78 41.0
Dinv42150 Davidia involucrata HOM05D005412 ORTHO05D006096 6.0e-06 54.3 69 44.9
ClCG05G010030 Citrullus lanatus HOM05D005412 ORTHO05D006096 7.8e-06 53.9 66 43.9
MELO3C019513.2 Cucumis melo HOM05D005412 ORTHO05D006096 7.8e-06 53.9 66 43.9
Dinv23615 Davidia involucrata HOM05D005412 ORTHO05D006096 7.8e-06 53.9 69 43.5
Dinv23622 Davidia involucrata HOM05D005412 ORTHO05D006096 7.8e-06 53.9 71 43.7
Dinv23623 Davidia involucrata HOM05D005412 ORTHO05D006096 7.8e-06 53.9 71 43.7
QL11p036050 Quercus lobata HOM05D005412 ORTHO05D006096 7.8e-06 53.9 70 42.9


User provided reference genes

Program Settings