Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 2.1e-230 802.0 401 100.0
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 1.0e-195 686.8 400 84.8
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 2.5e-191 672.2 403 83.4
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 7.4e-191 670.6 402 83.1
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 4.8e-190 667.9 402 83.1
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 7.6e-188 660.6 399 83.5
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 2.3e-184 649.0 387 82.4
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 6.7e-184 647.5 396 81.1
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 7.4e-183 644.0 436 75.9
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 6.3e-182 641.0 402 80.1
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 1.8e-181 639.4 404 80.0
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 1.8e-181 639.4 404 79.7
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 1.8e-181 639.4 404 80.2
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 5.3e-181 637.9 403 80.1
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 2.9e-179 632.1 385 81.0
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 6.7e-176 620.9 408 77.7
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 2.2e-174 615.9 406 77.8
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 1.4e-173 613.2 387 79.3
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 2.4e-173 612.5 412 75.5
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 2.4e-173 612.5 406 76.6
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 3.1e-173 612.1 401 77.1
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 4.1e-173 611.7 383 79.1
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 3.4e-172 608.6 396 77.3
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 1.0e-171 607.1 403 76.9
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 6.5e-171 604.4 375 79.5
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 1.1e-170 603.6 401 75.6
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 1.9e-170 602.8 409 75.3
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 4.2e-170 601.7 406 74.6
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 4.2e-170 601.7 404 76.7
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 3.6e-169 598.6 401 74.8
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 4.7e-169 598.2 407 73.7
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 3.3e-167 592.0 380 76.8
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 5.7e-167 591.3 404 75.2
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 7.4e-167 590.9 404 73.5
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.7e-166 589.7 364 79.4
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 4.8e-166 588.2 405 73.3
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 8.2e-166 587.4 401 72.8
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 1.4e-165 586.6 357 81.8
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.8e-165 586.3 401 73.1
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 3.1e-165 585.5 406 72.4
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 5.3e-165 584.7 401 73.1
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 7.0e-165 584.3 343 83.1
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.2e-164 583.6 401 72.8
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 2.0e-164 582.8 405 72.8
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 3.5e-164 582.0 398 73.1
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 1.7e-163 579.7 400 72.8
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 6.5e-163 577.8 358 79.9
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 2.5e-162 575.9 373 76.4
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 4.2e-162 575.1 352 81.0
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 4.2e-162 575.1 346 81.8
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 7.2e-162 574.3 404 71.3
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 7.2e-162 574.3 397 74.1
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 7.2e-162 574.3 352 80.7
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.2e-161 573.5 402 72.9
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 1.6e-161 573.2 415 72.0
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 2.1e-161 572.8 405 72.8
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 2.7e-161 572.4 427 68.9
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 3.6e-161 572.0 395 73.2
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 3.6e-161 572.0 395 73.2
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 8.0e-161 570.9 403 72.7
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 8.0e-161 570.9 381 75.3
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 8.0e-161 570.9 405 70.6
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 3.0e-160 568.9 399 70.9
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 4.0e-160 568.5 403 72.5
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 4.0e-160 568.5 403 71.5
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 4.0e-160 568.5 369 76.2
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 6.7e-160 567.8 405 71.4
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 1.1e-159 567.0 397 72.8
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 2.0e-159 566.2 405 71.6
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 2.6e-159 565.8 395 72.4
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 3.3e-159 565.5 382 73.6
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 5.7e-159 564.7 399 70.9
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 7.5e-159 564.3 403 71.5
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 7.5e-159 564.3 373 74.8
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 9.7e-159 563.9 342 80.4
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 2.2e-158 562.8 403 72.2
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 2.8e-158 562.4 399 70.7
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 3.7e-158 562.0 376 74.7
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 3.7e-158 562.0 385 71.9
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 4.8e-158 561.6 403 73.4
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 6.3e-158 561.2 399 69.9
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 1.1e-157 560.5 369 74.5
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 7.0e-157 557.8 327 82.9
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 7.0e-157 557.8 388 72.4
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 9.1e-157 557.4 345 79.4
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 3.5e-156 555.4 372 74.2
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 4.5e-156 555.1 343 78.1
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 7.7e-156 554.3 343 78.7
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 1.0e-155 553.9 387 72.1
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 1.3e-155 553.5 416 69.5
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 1.7e-155 553.1 402 71.6
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.7e-155 553.1 372 74.7
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 2.2e-155 552.7 343 76.7
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 2.2e-155 552.7 343 78.1
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 2.2e-155 552.7 371 73.0
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 2.1e-153 546.2 330 80.3
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 3.6e-153 545.4 388 70.9
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 1.4e-152 543.5 371 73.6
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 1.5e-151 540.0 373 71.3
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 2.6e-151 539.3 314 82.8
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 3.4e-151 538.9 364 71.4
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 2.2e-150 536.2 365 72.6
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 8.3e-150 534.3 363 73.3
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 1.4e-149 533.5 362 74.0
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.6e-148 530.0 371 71.4
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 7.2e-146 521.2 403 69.2
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 1.2e-145 520.4 466 61.2
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 1.5e-143 513.5 383 68.9
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 5.4e-141 505.0 405 64.9
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 7.7e-140 501.1 314 79.6
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 3.3e-138 495.7 573 49.7
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 5.6e-138 495.0 343 69.4
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 7.3e-138 494.6 292 83.2
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 2.8e-137 492.7 352 72.4
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 8.0e-137 491.1 352 72.4
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 1.2e-132 477.2 378 64.0
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 5.8e-127 458.4 350 64.9
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 2.7e-116 422.9 287 73.2
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 5.8e-111 405.2 360 63.1
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 1.0e-83 314.7 194 82.5
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 3.1e-72 276.6 373 44.8
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 2.2e-65 253.8 147 78.9
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 1.4e-64 251.1 302 52.0
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 7.7e-63 245.4 205 61.0
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 3.2e-53 213.4 186 64.0
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 4.4e-50 203.0 112 89.3
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 4.1e-48 196.4 128 72.7
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 4.0e-43 179.9 112 78.6
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 9.8e-34 148.7 341 31.7
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 7.0e-32 142.5 81 80.2
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 1.0e-27 128.6 80 75.0
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 2.0e-23 114.4 66 75.8
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 1.9e-13 81.3 53 73.6
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 1.2e-12 78.6 97 46.4
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 2.9e-09 67.4 45 66.7
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 3.5e-07 60.5 70 47.1


User provided reference genes

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