Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00215 Erythranthe guttata HOM05D000697 ORTHO05D010185 5.0e-16 86.7 44 100.0
CAN.G1544.1 Capsicum annuum HOM05D000697 ORTHO05D010185 1.1e-10 68.9 35 91.4
Manes.04G074110 Manihot esculenta HOM05D000697 ORTHO05D010185 9.1e-10 65.9 35 85.7
Carub.0007s0570 Capsella rubella HOM05D000697 ORTHO05D010185 1.2e-09 65.5 39 79.5
Manes.11G084900 Manihot esculenta HOM05D000697 ORTHO05D010185 1.6e-09 65.1 35 82.9
FAN19G2851 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.9e-09 63.2 36 77.8
FAN26G2107 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.9e-09 63.2 36 77.8
FAN28G2503 Fragaria x ananassa HOM05D000697 ORTHO05D000169 5.9e-09 63.2 36 77.8
Gohir.A12G062300 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.0e-08 62.4 35 80.0
Thecc.01G028200 Theobroma cacao HOM05D000697 ORTHO05D010185 1.0e-08 62.4 35 80.0
Thecc.02G081000 Theobroma cacao HOM05D000697 ORTHO05D010185 1.0e-08 62.4 35 82.9
Manes.02G097800 Manihot esculenta HOM05D000697 ORTHO05D010185 1.7e-08 61.6 35 80.0
CiPaw.08G138600 Carya illinoinensis HOM05D000697 ORTHO05D010185 2.2e-08 61.2 35 77.1
Prupe.7G160500 Prunus persica HOM05D000697 ORTHO05D010185 2.9e-08 60.8 35 80.0
Potri.009G119650 Populus trichocarpa HOM05D000697 ORTHO05D010185 3.8e-08 60.5 35 77.1
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 5.0e-08 60.1 36 75.0
Lj4g0025152 Lotus japonicus HOM05D000697 ORTHO05D000169 5.0e-08 60.1 43 65.1
CiPaw.07G050800 Carya illinoinensis HOM05D000697 ORTHO05D010185 6.5e-08 59.7 35 74.3
FAN15G1563 Fragaria x ananassa HOM05D000697 ORTHO05D000169 6.5e-08 59.7 40 72.5
Gohir.A04G124500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 8.5e-08 59.3 33 81.8
Gohir.A11G181800 Gossypium hirsutum HOM05D000697 ORTHO05D000169 8.5e-08 59.3 35 77.1
Gohir.D04G166600 Gossypium hirsutum HOM05D000697 ORTHO05D000169 8.5e-08 59.3 33 81.8
Gorai.012G155000 Gossypium raimondii HOM05D000697 ORTHO05D000169 8.5e-08 59.3 33 81.8
Potri.004G158150 Populus trichocarpa HOM05D000697 ORTHO05D010185 8.5e-08 59.3 35 74.3
Gohir.D11G188600 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.1e-07 58.9 35 74.3
Gorai.007G200600 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.1e-07 58.9 35 74.3
Potri.005G231250 Populus trichocarpa HOM05D000697 ORTHO05D010185 1.1e-07 58.9 35 71.4
arahy.Tifrunner.gnm1.ann1.T95EUW Arachis hypogaea HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
CiPaw.07G157300 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
CiPaw.08G060300 Carya illinoinensis HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Migut.C00767 Erythranthe guttata HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Migut.N00473 Erythranthe guttata HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
FAN20G0406 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.5e-07 58.5 37 75.7
FAN24G3114 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.5e-07 58.5 37 75.7
FAN27G3145 Fragaria x ananassa HOM05D000697 ORTHO05D000169 1.5e-07 58.5 37 75.7
Glyma.14G071500 Glycine max HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Glyma.17G253132 Glycine max HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Lalb_Chr14g0369491 Lupinus albus HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Manes.05G155332 Manihot esculenta HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Manes.18G021001 Manihot esculenta HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Phvul.001G011900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 1.5e-07 58.5 35 74.3
Aa31LG8G15820 Aethionema arabicum HOM05D000697 ORTHO05D010185 1.9e-07 58.2 39 71.8
Glyma.05G157100 Glycine max HOM05D000697 ORTHO05D010185 1.9e-07 58.2 39 66.7
Glyma.08G115251 Glycine max HOM05D000697 ORTHO05D010185 1.9e-07 58.2 39 66.7
Phvul.002G237700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 1.9e-07 58.2 39 66.7
Gohir.D02G217700 Gossypium hirsutum HOM05D000697 ORTHO05D010185 2.5e-07 57.8 35 77.1
Gohir.A06G007100 Gossypium hirsutum HOM05D000697 ORTHO05D010185 3.2e-07 57.4 35 71.4
Gohir.D05G194400 Gossypium hirsutum HOM05D000697 ORTHO05D010185 3.2e-07 57.4 35 71.4
MBI10_g00750_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 3.2e-07 57.4 38 73.7
Phvul.011G042700 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 3.2e-07 57.4 35 77.1
Potri.002G032000 Populus trichocarpa HOM05D000697 ORTHO05D010185 3.2e-07 57.4 35 71.4
Thecc.08G033000 Theobroma cacao HOM05D000697 ORTHO05D010185 3.2e-07 57.4 35 71.4
FAN27G0060 Fragaria x ananassa HOM05D000697 ORTHO05D010185 4.2e-07 57.0 35 74.3
Prupe.1G374500 Prunus persica HOM05D000697 ORTHO05D010185 4.2e-07 57.0 35 74.3
CiPaw.05G068000 Carya illinoinensis HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
Eucgr.I02397 Eucalyptus grandis HOM05D000697 ORTHO05D010185 5.5e-07 56.6 39 69.2
Glyma.04G010400 Glycine max HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
Glyma.11G114900 Glycine max HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
Glyma.12G040700 Glycine max HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
Phvul.009G005900 Phaseolus vulgaris HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
Potri.007G020000 Populus trichocarpa HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 74.3
vmacro04298 Vaccinium macrocarpon HOM05D000697 ORTHO05D010185 5.5e-07 56.6 35 71.4
CAN.G358.36 Capsicum annuum HOM05D000697 ORTHO05D010185 7.2e-07 56.2 35 71.4
CiPaw.06G133300 Carya illinoinensis HOM05D000697 ORTHO05D010185 7.2e-07 56.2 35 77.1
MD05G1062200 Malus domestica HOM05D000697 ORTHO05D000169 7.2e-07 56.2 37 70.3
BolC3t18161H Brassica oleracea HOM05D000697 ORTHO05D010185 9.4e-07 55.8 36 72.2
BraA06t26266Z Brassica rapa HOM05D000697 ORTHO05D010185 9.4e-07 55.8 36 72.2
Carub.0003s3231 Capsella rubella HOM05D000697 ORTHO05D010185 9.4e-07 55.8 36 72.2
CAN.G1373.26 Capsicum annuum HOM05D000697 ORTHO05D010185 9.4e-07 55.8 34 73.5
ClCG01G019930 Citrullus lanatus HOM05D000697 ORTHO05D010185 9.4e-07 55.8 29 86.2
Gohir.D01G102800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 1.2e-06 55.5 35 68.6
Cc10_g02470 Coffea canephora HOM05D000697 ORTHO05D010185 1.6e-06 55.1 35 68.6
FAN15G1852 Fragaria x ananassa HOM05D000697 ORTHO05D000169 2.1e-06 54.7 35 71.4
FAN26G2173 Fragaria x ananassa HOM05D000697 ORTHO05D010185 2.1e-06 54.7 35 71.4
Gohir.D12G062100 Gossypium hirsutum HOM05D000697 ORTHO05D000169 2.1e-06 54.7 32 78.1
Gorai.008G065300 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.1e-06 54.7 32 78.1
Potri.005G119400 Populus trichocarpa HOM05D000697 ORTHO05D010185 2.1e-06 54.7 36 75.0
Sed0018930 Sechium edule HOM05D000697 ORTHO05D000169 2.1e-06 54.7 35 68.6
BolC9t54271H Brassica oleracea HOM05D000697 ORTHO05D010185 3.6e-06 53.9 36 72.2
BraA07t28050Z Brassica rapa HOM05D000697 ORTHO05D010185 3.6e-06 53.9 36 72.2
BraA09t36820Z Brassica rapa HOM05D000697 ORTHO05D010185 3.6e-06 53.9 36 72.2
ClCG05G018700 Citrullus lanatus HOM05D000697 ORTHO05D010185 6.1e-06 53.1 35 65.7
Gohir.D02G095800 Gossypium hirsutum HOM05D000697 ORTHO05D010185 6.1e-06 53.1 35 65.7
Glyma.06G010300 Glycine max HOM05D000697 ORTHO05D010185 8.0e-06 52.8 41 70.7


User provided reference genes

Program Settings