Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 5.5e-281 970.3 486 100.0
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 1.7e-218 762.7 493 79.9
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 1.1e-207 726.9 432 81.9
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 5.8e-206 721.1 486 74.9
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 1.1e-204 716.8 434 80.0
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 1.9e-204 716.1 480 75.8
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 2.7e-203 712.2 470 74.9
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 1.7e-202 709.5 465 75.5
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 8.6e-202 707.2 457 77.0
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 1.2e-200 703.4 491 72.9
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 1.6e-200 703.0 450 76.2
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 2.1e-200 702.6 490 74.5
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 3.6e-200 701.8 435 78.2
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.8e-199 699.5 488 70.9
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 5.2e-199 698.0 479 73.5
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 8.9e-199 697.2 446 76.2
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 8.9e-199 697.2 479 73.5
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.2e-198 696.8 457 76.6
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 5.8e-198 694.5 421 80.0
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.3e-197 693.3 482 72.0
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.2e-197 692.6 421 79.8
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 2.9e-197 692.2 431 77.7
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 2.9e-197 692.2 485 72.0
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 6.4e-197 691.0 421 79.6
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 8.4e-197 690.6 423 78.7
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 1.9e-196 689.5 424 79.0
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.2e-195 686.8 421 78.6
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.2e-195 686.8 424 77.4
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 2.7e-195 685.6 446 75.1
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 4.6e-195 684.9 463 73.2
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 1.0e-194 683.7 456 73.5
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.7e-194 682.9 421 78.4
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 1.1e-193 680.2 451 73.8
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 5.6e-193 677.9 524 66.6
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 9.6e-193 677.2 424 76.9
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 2.1e-192 676.0 446 73.5
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 2.1e-192 676.0 440 75.0
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 2.8e-192 675.6 473 69.8
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 6.2e-192 674.5 464 71.8
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 6.2e-192 674.5 454 72.7
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 1.1e-191 673.7 457 71.6
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.4e-191 673.3 424 75.2
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.4e-191 673.3 507 67.9
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 1.4e-191 673.3 474 70.7
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 3.1e-191 672.2 457 71.6
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 8.9e-191 670.6 463 70.8
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 8.9e-191 670.6 457 71.3
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 8.9e-191 670.6 506 69.0
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 8.9e-191 670.6 466 70.8
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 1.2e-190 670.2 422 77.0
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 1.5e-190 669.8 441 74.1
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 4.4e-190 668.3 422 75.8
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 7.6e-190 667.5 421 76.0
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 6.4e-189 664.5 472 71.2
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 6.4e-189 664.5 482 70.3
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 6.4e-189 664.5 461 70.9
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 6.4e-189 664.5 420 75.7
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 3.5e-187 658.7 420 76.4
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 6.0e-187 657.9 421 75.1
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 1.7e-186 656.4 464 69.8
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 5.1e-186 654.8 428 73.4
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 8.7e-186 654.1 462 69.5
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 1.6e-179 633.3 444 70.7
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 7.9e-179 630.9 489 66.7
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 1.0e-178 630.6 479 67.4
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 4.3e-177 625.2 571 58.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 3.1e-175 619.0 379 79.2
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 5.3e-175 618.2 386 77.5
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 6.9e-175 617.8 438 70.5
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 3.4e-174 615.5 384 77.1
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 4.5e-174 615.1 384 77.1
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 8.4e-173 610.9 477 65.2
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 4.2e-172 608.6 381 76.6
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 6.0e-171 604.7 435 71.3
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 2.3e-170 602.8 379 75.5
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 2.3e-170 602.8 385 75.6
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 2.5e-164 582.8 485 62.9
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 2.3e-162 576.2 421 68.9
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 4.8e-160 568.5 336 81.8
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 1.2e-158 563.9 425 65.6
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 1.3e-157 560.5 399 68.4
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 3.8e-157 558.9 427 66.5
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 4.2e-156 555.4 420 65.2
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 7.9e-155 551.2 403 67.2
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 2.5e-153 546.2 421 62.9
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 9.7e-153 544.3 419 62.1
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 1.1e-151 540.8 354 74.6
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 6.9e-151 538.1 459 61.0
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.8e-143 513.5 356 70.2
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 1.8e-143 513.5 439 61.7
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 1.3e-141 507.3 316 78.2
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 3.0e-122 443.0 448 53.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 5.5e-116 422.2 465 49.2
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 2.0e-110 403.7 306 65.4
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 2.0e-102 377.1 246 73.2
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 4.0e-98 362.8 438 45.4
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.7e-88 330.9 305 58.0
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.4e-88 328.9 305 58.0
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 8.3e-88 328.6 284 57.0
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 2.3e-85 320.5 203 74.4
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 3.5e-78 296.6 226 67.7
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 3.3e-68 263.5 212 64.2
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 3.4e-65 253.4 181 68.0
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 3.3e-60 236.9 437 38.7
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 5.3e-58 229.6 307 48.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 2.4e-50 204.1 161 60.2
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 1.1e-36 158.7 105 66.7
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 2.2e-35 154.5 93 78.5
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 1.0e-32 145.6 85 85.9
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 3.3e-28 130.6 89 70.8
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.0e-17 94.7 54 79.6
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 1.4e-10 72.0 42 81.0
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.8e-08 63.9 39 71.8


User provided reference genes

Program Settings