Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 5.6e-104 380.9 193 100.0
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 1.4e-30 137.1 227 41.4
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 5.0e-28 128.6 215 43.7
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 4.4e-24 115.5 209 40.2
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 3.5e-21 105.9 277 35.4
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 9.5e-19 97.8 234 37.6
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 7.5e-16 88.2 226 35.8
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 1.3e-15 87.4 208 38.9
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.3e-15 87.4 234 35.0
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 1.1e-14 84.3 217 36.4
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 4.1e-14 82.4 209 35.4
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 5.4e-14 82.0 217 36.4
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 7.1e-14 81.6 209 38.3
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 7.1e-14 81.6 224 34.8
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 9.2e-14 81.3 217 35.9
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 9.2e-14 81.3 236 33.5
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.7e-13 79.7 237 34.6
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 7.8e-13 78.2 211 32.2
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 1.0e-12 77.8 194 35.6
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 2.3e-12 76.6 220 29.5
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 3.0e-12 76.3 189 35.4
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 3.0e-12 76.3 231 32.9
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 3.0e-12 76.3 193 33.7
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 3.9e-12 75.9 216 31.5
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.1e-11 74.3 218 33.5
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.9e-11 73.6 222 33.3
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.9e-11 73.6 226 32.7
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 3.3e-11 72.8 220 31.8
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 3.3e-11 72.8 225 32.0
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 3.3e-11 72.8 215 33.5
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 4.3e-11 72.4 221 30.8
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 5.6e-11 72.0 218 32.6
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 9.5e-11 71.2 208 36.5
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.2e-10 70.9 240 31.2
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.6e-10 70.5 233 31.8
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.6e-10 70.5 220 31.4
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 2.1e-10 70.1 234 30.8
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.1e-10 70.1 222 31.5
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 2.1e-10 70.1 239 32.2
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 4.7e-10 68.9 237 33.8
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 4.7e-10 68.9 195 33.8
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 6.2e-10 68.6 228 30.7
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 1.1e-09 67.8 236 31.8
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.1e-09 67.8 202 32.7
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 4.0e-09 65.9 240 26.7
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 5.2e-09 65.5 211 31.8
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 6.8e-09 65.1 232 29.3
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 8.9e-09 64.7 221 28.5
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 8.9e-09 64.7 225 30.7
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 1.5e-08 63.9 201 32.3
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 2.6e-08 63.2 247 29.1
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 5.8e-08 62.0 233 30.0
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 2.2e-07 60.1 235 28.9
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 2.9e-07 59.7 232 29.3
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 4.9e-07 58.9 105 38.1
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 1.1e-06 57.8 112 37.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.4e-06 57.4 112 37.5
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 7.1e-06 55.1 219 31.1


User provided reference genes

Program Settings