Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 0.0e+00 1528.5 1103 100.0
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 7.6e-254 881.3 1101 70.5
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 1.9e-217 760.4 1134 59.1
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 7.2e-204 715.3 1108 58.4
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 2.5e-180 637.1 1132 54.7
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 4.6e-166 589.7 1091 53.8
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 2.5e-156 557.4 1115 55.4
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 4.0e-154 550.1 1043 59.8
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 3.5e-150 537.0 1117 55.0
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 6.0e-150 536.2 1113 56.1
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.3e-149 535.0 1138 48.0
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 2.1e-147 527.7 1107 55.5
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 1.7e-144 518.1 1156 52.9
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 3.8e-144 516.9 1062 56.7
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 3.2e-143 513.8 1063 55.3
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 1.2e-142 511.9 1120 53.0
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 6.6e-141 506.1 1155 51.2
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 1.5e-140 505.0 1116 55.6
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 2.1e-139 501.1 1104 54.3
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 9.0e-138 495.7 1125 55.9
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 1.5e-137 495.0 1183 46.7
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 1.7e-136 491.5 1165 43.9
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 1.2e-134 485.3 1100 56.9
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 3.5e-134 483.8 1117 48.0
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 1.7e-133 481.5 1112 53.5
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 2.3e-133 481.1 1135 53.7
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 1.1e-132 478.8 1115 49.0
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 4.3e-132 476.9 1124 47.7
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.6e-131 474.9 1191 46.7
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 2.8e-131 474.2 1137 51.6
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 4.0e-130 470.3 1122 54.5
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 9.0e-130 469.2 1116 53.4
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 2.6e-129 467.6 1120 50.7
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 2.6e-129 467.6 719 70.4
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 7.6e-129 466.1 1071 54.5
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 7.6e-129 466.1 1104 54.9
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 2.9e-128 464.2 719 68.7
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.9e-128 464.2 1114 56.0
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 6.4e-128 463.0 1113 55.8
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 6.4e-128 463.0 1177 54.3
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 2.1e-126 458.0 1114 56.6
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 1.3e-125 455.3 835 56.0
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 2.3e-125 454.5 1081 53.7
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 3.0e-125 454.1 1087 52.7
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 7.4e-124 449.5 1076 55.8
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 7.4e-124 449.5 1116 54.2
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 7.4e-124 449.5 1114 53.3
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 3.7e-123 447.2 1134 51.9
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 6.2e-123 446.4 1151 53.8
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 2.4e-122 444.5 1087 56.8
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 4.0e-122 443.7 1115 54.7
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 4.0e-122 443.7 1208 52.2
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 6.9e-122 443.0 1133 50.6
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 2.6e-121 441.0 712 73.7
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 1.3e-120 438.7 1052 55.7
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 8.4e-120 436.0 1126 50.3
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 1.4e-119 435.3 1141 52.6
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 1.6e-118 431.8 1136 54.0
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 6.0e-118 429.9 1144 52.8
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 6.0e-118 429.9 1159 53.0
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 1.3e-117 428.7 710 65.6
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 1.8e-117 428.3 1120 54.6
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 3.0e-117 427.6 1108 49.3
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 3.3e-116 424.1 1107 51.3
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 5.6e-116 423.3 709 71.1
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 9.6e-116 422.5 1111 50.9
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 1.3e-115 422.2 1157 49.3
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 1.6e-115 421.8 1102 51.5
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 1.6e-115 421.8 689 74.3
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 6.2e-115 419.9 1158 49.1
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 2.4e-114 417.9 1102 54.4
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 3.1e-114 417.5 709 70.9
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 5.8e-113 413.3 974 53.0
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 5.5e-111 406.8 1026 55.5
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 6.7e-109 399.8 1019 47.2
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 5.7e-108 396.7 1111 52.3
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 8.2e-107 392.9 886 61.6
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 1.1e-106 392.5 1109 49.0
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 1.8e-106 391.7 734 67.0
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 4.5e-105 387.1 1039 45.4
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 1.4e-103 382.1 1131 46.4
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 1.2e-102 379.0 1119 51.3
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 6.1e-102 376.7 901 44.2
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 1.0e-101 375.9 604 67.7
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 8.8e-101 372.9 833 61.8
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 1.7e-99 368.6 1160 49.2
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 2.8e-99 367.9 1147 49.4
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 3.7e-99 367.5 1126 50.9
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 1.1e-98 365.9 1153 49.6
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 3.1e-98 364.4 1153 49.3
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 4.5e-97 360.5 1166 49.1
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 7.2e-95 353.2 720 58.3
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 2.7e-94 351.3 772 57.3
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 2.1e-86 325.1 715 57.2
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 3.5e-81 307.8 988 54.5
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.2e-70 272.7 705 47.5
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 5.7e-68 263.8 259 49.8
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 1.7e-59 235.7 161 70.8
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 1.2e-49 203.0 694 51.3
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 2.0e-49 202.2 744 42.5
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.2e-44 186.4 123 75.6
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 7.3e-39 167.2 656 43.6
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 1.6e-38 166.0 663 61.7
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 4.7e-38 164.5 238 86.6
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 8.1e-38 163.7 272 38.2
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.0e-36 159.1 282 36.5
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 4.9e-35 154.5 705 46.8
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 1.1e-34 153.3 283 41.7
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 4.1e-34 151.4 299 68.6
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 5.1e-32 144.4 305 59.7
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 3.3e-31 141.7 258 73.6
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 9.5e-31 140.2 113 57.5
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 6.8e-29 134.0 657 60.0
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 4.4e-28 131.3 882 49.3
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 9.9e-28 130.2 288 32.3
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.4e-26 125.6 661 53.6
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 3.2e-26 125.2 123 52.0
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 3.9e-24 118.2 109 56.9
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.1e-23 116.7 99 57.6
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 4.4e-20 104.8 105 45.7
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 2.9e-19 102.1 96 50.0
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 9.9e-12 77.0 244 29.5
CDE09G0717 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 2.7e-09 68.9 78 74.4


User provided reference genes

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