Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.7e-105 385.6 232 100.0
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 4.3e-74 282.0 232 69.0
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 1.6e-73 280.0 232 74.1
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.2e-62 243.0 176 78.4
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 3.8e-62 242.3 238 61.3
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 3.8e-62 242.3 210 67.6
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 6.4e-62 241.5 178 75.8
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 8.4e-62 241.1 182 75.3
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.1e-61 240.7 176 79.0
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 4.1e-61 238.8 175 76.6
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 5.4e-61 238.4 177 76.3
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 5.4e-61 238.4 176 81.2
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 7.1e-61 238.0 175 75.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 7.1e-61 238.0 175 75.4
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 9.2e-61 237.7 176 75.6
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 2.7e-60 236.1 236 61.0
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.7e-60 236.1 177 76.3
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 7.8e-60 234.6 177 79.1
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 7.8e-60 234.6 239 60.3
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 7.8e-60 234.6 136 90.4
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 1.0e-59 234.2 176 76.1
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.3e-59 233.0 175 75.4
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 3.0e-59 232.6 178 71.3
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 3.0e-59 232.6 177 73.4
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.9e-59 232.3 175 73.1
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 5.1e-59 231.9 175 74.9
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 6.6e-59 231.5 176 75.6
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.6e-59 231.5 234 61.5
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 8.7e-59 231.1 174 76.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.7e-59 231.1 175 75.4
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 8.7e-59 231.1 177 75.1
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 8.7e-59 231.1 176 74.4
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 1.1e-58 230.7 177 74.6
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.1e-58 230.7 224 64.3
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.1e-58 230.7 177 72.9
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.1e-58 230.7 177 75.1
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 1.5e-58 230.3 181 71.8
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 2.5e-58 229.6 148 83.1
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.5e-58 229.6 172 76.2
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 3.3e-58 229.2 176 72.7
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 4.3e-58 228.8 232 60.3
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 5.6e-58 228.4 228 60.1
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 7.3e-58 228.0 175 73.7
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 9.6e-58 227.6 172 73.8
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 9.6e-58 227.6 177 74.6
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.2e-57 227.3 177 74.6
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.6e-57 226.9 181 73.5
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 1.6e-57 226.9 177 74.6
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.6e-57 226.9 176 76.1
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.1e-57 226.5 177 75.7
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 2.1e-57 226.5 177 71.8
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 2.8e-57 226.1 174 71.8
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 3.6e-57 225.7 177 72.9
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 3.6e-57 225.7 175 72.6
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 4.7e-57 225.3 178 70.2
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 4.7e-57 225.3 175 72.6
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 6.2e-57 224.9 184 72.8
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 6.2e-57 224.9 156 80.8
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 6.2e-57 224.9 156 80.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 6.2e-57 224.9 179 73.2
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 1.1e-56 224.2 177 74.6
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.1e-56 224.2 162 75.3
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 184 72.3
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 162 75.3
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.1e-56 224.2 140 85.0
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.4e-56 223.8 183 71.6
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 1.4e-56 223.8 176 73.9
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 1.4e-56 223.8 185 71.9
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 1.4e-56 223.8 181 68.0
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 1.4e-56 223.8 180 73.3
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 1.8e-56 223.4 145 81.4
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 1.8e-56 223.4 173 71.1
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 2.4e-56 223.0 149 82.6
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 4.0e-56 222.2 181 71.8
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 5.2e-56 221.9 177 72.3
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 1.2e-55 220.7 173 70.5
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.2e-55 220.7 174 70.1
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 1.5e-55 220.3 183 69.4
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 3.4e-55 219.2 177 70.6
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.4e-55 219.2 324 46.3
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.4e-55 219.2 165 74.5
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 4.4e-55 218.8 177 70.6
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 5.8e-55 218.4 124 91.1
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 7.6e-55 218.0 174 69.5
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 2.2e-54 216.5 184 67.4
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.8e-54 215.7 176 75.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.9e-53 213.4 176 65.3
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 7.1e-53 211.5 134 81.3
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 9.3e-53 211.1 139 77.0
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 1.6e-52 210.3 196 64.8
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 2.7e-52 209.5 163 73.6
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.3e-51 206.5 123 87.0
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 2.5e-50 203.0 179 65.9
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 5.6e-50 201.8 151 74.2
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 2.1e-49 199.9 175 66.9
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.1e-49 199.9 124 83.1
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 2.1e-49 199.9 124 83.1
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 4.8e-49 198.7 160 71.9
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 2.4e-48 196.4 122 82.8
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.4e-48 196.4 121 81.8
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 6.9e-48 194.9 151 70.9
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 9.0e-48 194.5 175 58.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 2.6e-47 193.0 124 80.6
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 1.2e-44 184.1 140 66.4
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.1e-44 183.3 144 64.6
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 7.9e-44 181.4 167 64.1
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.6e-41 173.7 157 58.6
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 3.7e-41 172.6 145 60.7
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.7e-38 163.7 149 63.1
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 6.9e-32 141.7 134 53.0
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.9e-27 125.9 113 65.5
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.3e-26 122.5 171 50.9
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 7.4e-26 121.7 91 72.5
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 1.3e-25 120.9 98 62.2
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 4.1e-24 115.9 139 45.3
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 8.5e-22 108.2 140 44.3
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 5.5e-21 105.5 65 86.2
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 1.9e-18 97.1 71 76.1
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 2.5e-18 96.7 90 60.0
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.3e-17 94.4 102 54.9
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 1.4e-11 74.3 56 64.3


User provided reference genes

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