Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 2.8e-172 608.6 322 100.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 6.7e-118 427.9 335 65.1
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 2.0e-109 399.8 339 68.1
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 8.2e-108 394.4 317 62.8
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 3.1e-107 392.5 323 63.2
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 7.2e-104 381.3 317 69.4
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 1.0e-102 377.5 319 57.4
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 3.9e-102 375.6 321 57.0
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 8.8e-102 374.4 319 62.4
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 1.7e-100 370.2 318 59.7
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 2.8e-100 369.4 313 62.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 2.8e-100 369.4 319 64.3
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 2.6e-98 362.8 321 64.5
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 7.7e-98 361.3 324 55.2
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.7e-97 360.1 322 56.2
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.9e-96 356.7 317 62.1
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 2.5e-96 356.3 320 60.3
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 3.2e-96 355.9 325 60.9
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 3.2e-96 355.9 340 56.5
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 7.2e-96 354.8 328 62.5
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 9.4e-96 354.4 327 59.0
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 2.3e-94 349.7 317 62.8
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 5.2e-94 348.6 333 60.1
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 7.5e-93 344.7 317 63.7
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 7.5e-93 344.7 322 61.2
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 9.7e-93 344.4 323 55.4
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 6.3e-92 341.7 336 52.1
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 1.1e-91 340.9 337 59.1
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.4e-91 339.7 318 58.5
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 4.1e-91 339.0 317 54.9
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 5.3e-91 338.6 319 57.7
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 5.3e-91 338.6 316 62.0
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 7.0e-91 338.2 326 61.7
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 9.1e-91 337.8 313 61.0
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 9.1e-91 337.8 332 59.6
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.2e-90 337.4 345 55.7
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.2e-90 337.4 339 57.8
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.7e-90 334.7 345 50.7
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.3e-89 334.0 300 60.3
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.7e-89 333.6 354 56.2
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.9e-89 332.8 351 55.6
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 3.8e-89 332.4 340 57.6
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 3.8e-89 332.4 336 53.9
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 6.5e-89 331.6 318 56.9
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 1.1e-88 330.9 351 56.1
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 1.9e-88 330.1 353 55.5
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 2.5e-88 329.7 317 57.4
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.2e-88 328.9 327 54.4
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 7.2e-88 328.2 323 53.9
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 7.2e-88 328.2 323 53.9
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 2.1e-87 326.6 353 52.1
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 2.1e-87 326.6 319 58.6
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 2.1e-87 326.6 338 56.5
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 2.7e-87 326.2 310 54.5
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.7e-87 326.2 378 48.7
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.2e-85 320.9 325 50.8
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 2.6e-85 319.7 269 60.6
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 3.4e-85 319.3 318 58.2
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 1.3e-84 317.4 317 58.0
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 1.7e-84 317.0 334 51.2
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 2.2e-84 316.6 327 58.4
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 2.2e-84 316.6 331 54.4
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 3.7e-84 315.8 316 55.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 8.3e-84 314.7 324 59.6
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.0e-82 310.1 326 55.5
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 4.5e-82 308.9 333 50.8
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 7.7e-82 308.1 315 50.5
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 1.3e-81 307.4 328 57.0
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.9e-81 306.2 326 52.5
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.1e-80 304.3 326 54.9
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 1.9e-80 303.5 333 53.5
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 2.5e-80 303.1 313 51.4
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.2e-79 300.8 333 48.3
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 6.1e-79 298.5 342 55.0
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 5.2e-78 295.4 331 51.4
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 2.0e-77 293.5 334 54.2
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 2.0e-77 293.5 351 52.4
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 3.4e-77 292.7 339 45.7
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 1.3e-76 290.8 336 53.3
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.1e-75 287.7 331 53.2
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-75 287.3 341 50.7
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-75 287.3 331 53.2
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 1.8e-75 287.0 339 50.7
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 2.4e-75 286.6 357 50.4
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 2.4e-75 286.6 331 48.3
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 5.4e-75 285.4 318 50.9
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 9.2e-75 284.6 341 49.3
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.0e-74 283.5 320 46.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 2.7e-74 283.1 341 48.7
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 2.7e-74 283.1 341 49.0
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 2.7e-74 283.1 341 48.7
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 2.7e-74 283.1 341 48.7
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 3.5e-74 282.7 326 53.7
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.5e-74 282.7 320 45.9
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 5.9e-74 282.0 326 47.2
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.7e-74 281.6 320 46.2
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 1.5e-72 277.3 356 48.6
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 1.6e-71 273.9 371 47.2
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 4.7e-71 272.3 377 48.0
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 3.0e-70 269.6 329 51.4
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 4.0e-70 269.2 342 52.3
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.6e-69 266.5 306 52.0
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 2.9e-68 263.1 330 50.0
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.4e-68 261.9 320 45.9
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 3.0e-65 253.1 320 44.1
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 2.2e-60 236.9 214 59.8
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 3.7e-60 236.1 326 42.6
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.9e-59 233.8 257 56.8
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.9e-56 223.8 308 40.9
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.1e-54 218.0 330 45.5
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.2e-47 194.5 235 44.7
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.7e-47 192.6 318 38.7
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.8e-46 190.7 352 39.5
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 8.9e-46 188.3 319 42.3
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.3e-44 184.5 390 38.7
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 3.5e-42 176.4 130 60.0
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 5.6e-40 169.1 129 61.2
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 7.6e-37 158.7 151 50.3
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.1e-34 150.6 167 47.3
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 5.8e-29 132.5 303 35.0
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.9e-27 127.5 317 29.7
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.8e-25 120.9 300 29.3
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.1e-24 118.2 106 51.9
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.8e-22 110.9 143 43.4
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.8e-20 103.2 316 25.6
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 2.7e-18 97.1 322 26.7
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.0e-18 95.9 209 42.1
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 7.6e-13 79.0 66 57.6
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 1.3e-12 78.2 114 42.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 4.8e-07 59.7 93 36.6


User provided reference genes

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