Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00057 Erythranthe guttata HOM05D007970 ORTHO05D009943 8.0e-54 213.4 99 100.0
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 2.6e-20 102.1 96 46.9
Migut.N01333 Erythranthe guttata HOM05D007970 ORTHO05D009943 2.9e-19 98.6 87 56.3
SGA_v2.0_scaffold58G20343 Striga asiatica HOM05D007970 ORTHO05D009943 2.3e-16 89.0 92 53.3
Dinv41914 Davidia involucrata HOM05D007970 ORTHO05D009943 3.0e-16 88.6 103 45.6
Nitab4.5_0013642g0020 Nicotiana tabacum HOM05D007970 ORTHO05D009943 3.0e-16 88.6 103 46.6
Peaxi162Scf00362g00411 Petunia axillaris HOM05D007970 ORTHO05D009943 1.1e-15 86.7 97 48.5
TWI31G1200 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 1.1e-15 86.7 94 50.0
SGA_v2.0_scaffold195G40813 Striga asiatica HOM05D007970 ORTHO05D009943 4.3e-15 84.7 81 50.6
Hma1.2p1_0032F.1_g019140 Hydrangea macrophylla HOM05D007970 ORTHO05D009943 7.3e-15 84.0 103 43.7
Actinidia14361 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.2e-14 83.2 100 44.0
Actinidia21480 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.2e-14 83.2 100 44.0
TWI75G1150 Tripterygium wilfordii HOM05D007970 ORTHO05D009943 2.8e-14 82.0 90 48.9
Sopen01g053860 Solanum pennellii HOM05D007970 ORTHO05D009943 3.6e-14 81.6 99 43.4
Rhsim11G0193700 Rhododendron simsii HOM05D007970 ORTHO05D009943 4.7e-14 81.3 93 46.2
Solyc01g111820.2 Solanum lycopersicum HOM05D007970 ORTHO05D009943 4.7e-14 81.3 102 43.1
CAN.G588.103 Capsicum annuum HOM05D007970 ORTHO05D009943 6.2e-14 80.9 102 44.1
Oeu045100.1 Olea europaea HOM05D007970 ORTHO05D009943 8.1e-14 80.5 85 50.6
PGSC0003DMG400018628 Solanum tuberosum HOM05D007970 ORTHO05D009943 8.1e-14 80.5 85 48.2
Oeu028958.1 Olea europaea HOM05D007970 ORTHO05D009943 4.0e-13 78.2 87 47.1
Actinidia18037 Actinidia chinensis HOM05D007970 ORTHO05D009943 1.2e-12 76.6 86 44.2
Oeu015553.1 Olea europaea HOM05D007970 ORTHO05D009943 1.2e-12 76.6 93 41.9
SGA_v2.0_scaffold32G13308 Striga asiatica HOM05D007970 ORTHO05D009943 1.2e-12 76.6 84 47.6
CSS0030284 Camellia sinensis var. sinensis HOM05D007970 ORTHO05D009943 1.5e-12 76.3 91 46.2
Rhsim05G0052900 Rhododendron simsii HOM05D007970 ORTHO05D009943 2.6e-12 75.5 91 46.2
Thecc.02G055100 Theobroma cacao HOM05D007970 ORTHO05D009943 3.4e-12 75.1 99 41.4
vmacro17329 Vaccinium macrocarpon HOM05D007970 ORTHO05D009943 3.4e-12 75.1 92 46.7
TAR376G1232 Trochodendron aralioides HOM05D007970 ORTHO05D009943 4.4e-12 74.7 93 46.2
COL.COLO4_36729 Corchorus olitorius HOM05D007970 ORTHO05D009943 9.9e-12 73.6 102 40.2
Duzib248G1052 Durio zibethinus HOM05D007970 ORTHO05D009943 4.9e-11 71.2 99 41.4
Lsat_1_v5_gn_4_72040 Lactuca sativa HOM05D007970 ORTHO05D009943 4.9e-11 71.2 81 45.7
Dinv14128 Davidia involucrata HOM05D007970 ORTHO05D009943 1.1e-10 70.1 87 41.4
Actinidia20529 Actinidia chinensis HOM05D007970 ORTHO05D009943 9.2e-10 67.0 58 53.4
Haze_02097 Corylus avellana HOM05D007970 ORTHO05D009943 9.2e-10 67.0 98 40.8
Cfa005290 Carpinus fangiana HOM05D007970 ORTHO05D009943 1.2e-09 66.6 113 37.2
Manes.11G099100 Manihot esculenta HOM05D007970 ORTHO05D009943 2.1e-09 65.9 99 34.3
Nn5g30844 Nelumbo nucifera HOM05D007970 ORTHO05D006261 2.1e-09 65.9 101 37.6
Gohir.A03G206000 Gossypium hirsutum HOM05D007970 ORTHO05D009943 2.7e-09 65.5 117 35.0
Gorai.005G255300 Gossypium raimondii HOM05D007970 ORTHO05D009943 2.7e-09 65.5 118 36.4
Peaxi162Scf00078g00137 Petunia axillaris HOM05D007970 ORTHO05D009943 2.7e-09 65.5 76 46.1
Manes.04G070700 Manihot esculenta HOM05D007970 ORTHO05D009943 6.0e-09 64.3 103 41.7
Potri.004G178101 Populus trichocarpa HOM05D007970 ORTHO05D009943 6.0e-09 64.3 98 35.7
Gohir.D02G227400 Gossypium hirsutum HOM05D007970 ORTHO05D009943 7.8e-09 63.9 118 35.6
FAN27G0083 Fragaria x ananassa HOM05D007970 ORTHO05D009943 1.0e-08 63.5 108 39.8
Lj9P400T40 Lonicera japonica HOM05D007970 ORTHO05D009943 1.0e-08 63.5 94 40.4
Nitab4.5_0000079g0240 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.0e-08 63.5 62 50.0
Prupe.8G169400 Prunus persica HOM05D007970 ORTHO05D009943 1.0e-08 63.5 107 39.3
MD10G1128300 Malus domestica HOM05D007970 ORTHO05D009943 1.7e-08 62.8 96 37.5
FAN15G0059 Fragaria x ananassa HOM05D007970 ORTHO05D009943 2.3e-08 62.4 108 39.8
FAN20G1196 Fragaria x ananassa HOM05D007970 ORTHO05D009943 3.0e-08 62.0 108 39.8
RcHm_v2.0_Chr6g0278991 Rosa chinensis HOM05D007970 ORTHO05D009943 3.0e-08 62.0 105 39.0
FvH4_2g15690 Fragaria vesca HOM05D007970 ORTHO05D009943 5.1e-08 61.2 106 36.8
FAN24G2575 Fragaria x ananassa HOM05D007970 ORTHO05D009943 5.1e-08 61.2 106 36.8
Gorai.012G156800 Gossypium raimondii HOM05D007970 ORTHO05D009943 5.1e-08 61.2 102 36.3
CiPaw.05G085600 Carya illinoinensis HOM05D007970 ORTHO05D009943 8.6e-08 60.5 81 44.4
Gohir.D04G168500 Gossypium hirsutum HOM05D007970 ORTHO05D009943 8.6e-08 60.5 77 41.6
Sabra04G0119900 Salix brachista HOM05D007970 ORTHO05D009943 8.6e-08 60.5 101 34.7
Gohir.A04G131900 Gossypium hirsutum HOM05D007970 ORTHO05D009943 1.1e-07 60.1 79 41.8
Nitab4.5_0004867g0050 Nicotiana tabacum HOM05D007970 ORTHO05D009943 1.1e-07 60.1 65 50.8
Gohir.D01G161700 Gossypium hirsutum HOM05D007970 ORTHO05D009943 4.3e-07 58.2 105 37.1
Gorai.002G200600 Gossypium raimondii HOM05D007970 ORTHO05D009943 4.3e-07 58.2 105 37.1
Ciclev10030163m.g Citrus clementina HOM05D007970 ORTHO05D009943 5.6e-07 57.8 89 39.3
CANSAT25G3784 Cannabis sativa HOM05D007970 ORTHO05D009943 2.8e-06 55.5 88 46.6
MD14G1036000 Malus domestica HOM05D006872 ORTHO05D006261 8.1e-06 53.9 80 36.2
QL11p052437 Quercus lobata HOM05D007970 ORTHO05D009943 8.1e-06 53.9 88 37.5


User provided reference genes

Program Settings