Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 4.2e-127 458.0 226 100.0
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 1.2e-100 370.2 233 79.0
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 4.3e-95 351.7 227 74.4
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 2.3e-93 345.9 224 74.1
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 2.3e-93 345.9 226 71.7
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 4.0e-93 345.1 226 72.6
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 6.8e-93 344.4 224 73.2
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 1.2e-92 343.6 225 71.1
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 2.6e-92 342.4 226 73.9
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 9.9e-92 340.5 226 71.7
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 1.3e-91 340.1 226 73.5
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 1.7e-91 339.7 224 71.4
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 2.2e-91 339.3 226 71.2
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 4.9e-91 338.2 226 68.1
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 3.2e-90 335.5 226 71.2
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 5.4e-90 334.7 223 72.2
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 9.2e-90 334.0 225 70.2
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 2.1e-89 332.8 223 71.3
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 6.0e-89 331.3 225 71.6
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 6.0e-89 331.3 222 70.7
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 6.0e-89 331.3 226 69.0
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 7.8e-89 330.9 219 72.1
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 7.8e-89 330.9 222 70.7
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 1.0e-88 330.5 225 69.8
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 1.0e-88 330.5 226 72.1
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 1.3e-88 330.1 225 69.8
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 3.9e-88 328.6 232 70.3
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 8.6e-88 327.4 225 68.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 3.3e-87 325.5 225 68.9
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 2.1e-86 322.8 224 67.0
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 3.6e-86 322.0 223 67.7
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 4.7e-86 321.6 222 68.0
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 4.7e-86 321.6 234 67.9
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 4.7e-86 321.6 226 69.5
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 6.2e-86 321.2 227 68.3
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 8.1e-86 320.9 225 68.9
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 1.8e-85 319.7 226 68.1
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 2.4e-85 319.3 225 68.0
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 2.4e-85 319.3 246 63.8
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 2.4e-85 319.3 223 66.8
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 4.0e-85 318.5 225 64.4
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 5.2e-85 318.2 222 67.6
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 5.2e-85 318.2 225 68.4
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 6.8e-85 317.8 225 66.2
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 1.2e-84 317.0 225 69.3
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 1.5e-84 316.6 222 67.6
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 2.0e-84 316.2 225 67.1
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 2.6e-84 315.8 225 67.1
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 3.4e-84 315.5 225 67.6
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 3.4e-84 315.5 225 67.6
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 3.4e-84 315.5 222 68.9
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 4.4e-84 315.1 240 64.6
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 5.8e-84 314.7 221 67.0
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 5.8e-84 314.7 225 66.2
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 1.3e-83 313.5 221 67.0
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 1.3e-83 313.5 225 66.7
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 1.3e-83 313.5 224 67.9
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 2.2e-83 312.8 207 71.5
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 2.2e-83 312.8 223 65.9
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 2.9e-83 312.4 225 66.2
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.9e-83 312.4 223 66.4
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 3.8e-83 312.0 222 66.2
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 4.9e-83 311.6 226 65.0
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.1e-82 310.5 225 66.2
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 5.4e-82 308.1 225 64.4
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 7.1e-82 307.8 225 64.9
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 9.3e-82 307.4 222 65.3
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 1.6e-81 306.6 226 65.5
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 2.1e-81 306.2 226 65.0
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 2.7e-81 305.8 225 64.4
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 7.8e-81 304.3 226 64.6
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.7e-80 303.1 225 64.9
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 5.1e-80 301.6 222 64.4
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 9.6e-79 297.4 226 61.5
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 8.1e-78 294.3 226 63.3
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 6.9e-77 291.2 226 62.8
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 7.6e-76 287.7 224 63.4
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 1.7e-75 286.6 221 61.5
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.2e-75 286.2 244 59.4
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.9e-74 283.1 221 62.4
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 1.9e-74 283.1 222 64.9
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 5.4e-74 281.6 176 77.3
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 1.2e-73 280.4 244 58.2
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 4.6e-73 278.5 244 57.8
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 1.8e-69 266.5 226 59.7
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 7.6e-68 261.2 225 58.7
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 8.4e-67 257.7 235 54.9
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 7.1e-66 254.6 160 71.2
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 6.0e-65 251.5 222 55.9
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 6.7e-64 248.1 142 78.2
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 1.1e-63 247.3 160 71.2
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 4.0e-61 238.8 158 69.6
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 3.4e-60 235.7 235 54.5
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 1.3e-59 233.8 160 67.5
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 1.7e-59 233.4 172 65.7
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 2.9e-59 232.6 173 61.8
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 2.9e-59 232.6 235 54.0
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 2.1e-57 226.5 222 52.7
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 4.6e-57 225.3 227 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 2.3e-56 223.0 225 51.1
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 5.1e-56 221.9 223 51.1
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 3.3e-55 219.2 223 50.2
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 6.3e-54 214.9 171 62.0
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 9.0e-53 211.1 170 61.8
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 1.2e-52 210.7 171 59.6
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 1.5e-47 193.7 118 74.6
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 1.6e-46 190.3 118 72.0
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 4.1e-45 185.7 143 60.1
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 6.5e-43 178.3 247 42.1
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 1.8e-40 170.2 105 74.3
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 1.7e-35 153.7 127 58.3
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 6.5e-35 151.8 131 61.1
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 1.6e-33 147.1 144 55.6
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 1.0e-32 144.4 147 55.1
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 2.4e-29 133.3 226 37.2
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 3.1e-29 132.9 107 61.7
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 1.5e-15 87.4 52 78.8
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 1.5e-15 87.4 52 78.8
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 4.4e-15 85.9 86 47.7
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 4.4e-15 85.9 86 47.7
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 1.3e-14 84.3 61 60.7
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 8.5e-11 71.6 47 68.1
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 8.8e-08 61.6 187 25.7
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 3.4e-07 59.7 213 26.8
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 3.4e-07 59.7 186 29.0
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 4.4e-07 59.3 186 29.0
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 5.7e-07 58.9 192 30.2
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 9.8e-07 58.2 199 28.6
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 2.2e-06 57.0 183 27.9
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 2.2e-06 57.0 189 28.6
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 2.8e-06 56.6 186 29.0
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 3.7e-06 56.2 186 28.5
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 3.7e-06 56.2 192 29.2
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 3.7e-06 56.2 186 28.5
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 3.7e-06 56.2 192 28.1
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 4.9e-06 55.8 186 28.5
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 6.3e-06 55.5 192 28.6
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 8.3e-06 55.1 192 28.6


User provided reference genes

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