Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 1.3e-221 773.9 870 100.0
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 2.9e-139 500.4 873 82.5
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 6.2e-134 482.6 865 79.1
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 8.1e-110 402.5 873 78.1
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 3.2e-90 337.4 878 72.1
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 9.4e-90 335.9 886 75.3
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 1.5e-84 318.5 875 74.7
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 1.8e-77 295.0 875 61.1
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 5.3e-77 293.5 868 69.7
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 9.1e-77 292.7 868 72.7
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 4.5e-76 290.4 873 70.6
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 1.2e-73 282.3 863 74.2
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 6.1e-73 280.0 380 73.4
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 3.9e-72 277.3 866 71.4
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.3e-70 272.3 865 69.2
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 2.8e-70 271.2 876 68.0
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.4e-69 268.9 873 71.6
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 7.7e-68 263.1 834 74.8
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 1.3e-67 262.3 375 72.8
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 5.0e-67 260.4 870 65.1
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 5.0e-67 260.4 885 69.0
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 6.5e-67 260.0 374 74.1
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 8.5e-67 259.6 378 70.6
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 1.5e-66 258.8 877 70.7
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 1.5e-66 258.8 377 71.1
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 1.9e-66 258.5 377 73.2
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 1.9e-66 258.5 874 68.8
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 9.4e-66 256.1 377 72.1
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 1.6e-65 255.4 377 70.6
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 6.1e-65 253.4 834 74.3
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 1.4e-64 252.3 375 70.9
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 3.0e-64 251.1 360 73.9
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 5.2e-64 250.4 377 71.9
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 1.2e-63 249.2 877 67.0
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 2.6e-63 248.1 374 69.8
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 9.7e-63 246.1 374 73.0
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 1.3e-62 245.7 877 67.0
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 1.7e-62 245.4 877 67.2
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 3.7e-62 244.2 865 70.1
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 1.1e-61 242.7 374 69.0
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 1.1e-61 242.7 360 73.3
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 1.8e-61 241.9 877 63.7
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 1.6e-60 238.8 843 70.0
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 3.5e-60 237.7 867 70.7
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 5.9e-60 236.9 378 66.9
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 3.8e-59 234.2 378 66.7
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 3.8e-59 234.2 875 68.6
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 6.5e-59 233.4 867 70.6
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 1.1e-58 232.6 382 67.8
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 9.4e-58 229.6 867 70.2
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 1.6e-57 228.8 440 58.2
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 4.7e-57 227.3 378 66.4
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 1.8e-56 225.3 378 65.6
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 5.2e-56 223.8 378 66.1
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 5.2e-56 223.8 378 66.1
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 5.2e-56 223.8 378 66.1
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 2.6e-55 221.5 361 68.4
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 7.5e-55 219.9 378 66.9
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 1.3e-54 219.2 872 70.1
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 4.8e-54 217.2 377 67.4
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 6.3e-54 216.9 377 65.8
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 1.4e-53 215.7 371 66.3
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 4.1e-53 214.2 197 54.8
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 3.5e-52 211.1 866 66.9
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 3.5e-52 211.1 877 61.3
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 3.5e-52 211.1 888 55.6
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 3.8e-51 207.6 378 65.3
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 5.0e-51 207.2 871 60.3
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 8.6e-51 206.5 377 67.1
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 8.6e-51 206.5 368 66.0
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 5.5e-50 203.8 855 64.2
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 2.1e-49 201.8 368 64.9
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 3.6e-49 201.1 368 65.2
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 1.8e-48 198.7 349 67.6
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 6.8e-48 196.8 368 65.5
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 8.9e-48 196.4 872 60.1
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 8.9e-48 196.4 872 60.1
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 4.4e-47 194.1 852 66.5
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 7.0e-45 186.8 373 64.6
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 9.2e-45 186.4 185 48.1
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 2.0e-44 185.3 799 71.1
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 4.5e-44 184.1 360 66.1
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 7.8e-44 183.3 378 64.6
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 7.8e-44 183.3 839 57.6
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 5.0e-43 180.6 178 47.8
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 2.3e-40 171.8 378 61.6
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.2e-39 169.5 385 62.6
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 5.8e-39 167.2 286 78.0
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 8.3e-38 163.3 382 62.0
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 1.1e-32 146.4 178 44.4
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 2.3e-32 145.2 188 44.1
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 4.0e-32 144.4 376 59.6
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 1.2e-31 142.9 362 61.6
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 2.9e-30 138.3 833 62.8
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 1.4e-29 136.0 396 45.2
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 1.9e-29 135.6 369 58.3
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 8.6e-27 126.7 193 36.3
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 1.9e-26 125.6 374 58.3
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 3.1e-24 118.2 389 55.3
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 2.2e-22 112.1 149 40.3
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 3.3e-18 98.2 190 34.2
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 3.6e-17 94.7 59 74.6
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 1.8e-16 92.4 108 50.0
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 3.1e-16 91.7 141 36.9
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 4.2e-13 81.3 100 44.0
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 3.5e-12 78.2 121 43.0
SEGI_20674 Sequoiadendron giganteum HOM05D007101 ORTHO05D008632 2.0e-07 62.4 53 58.5


User provided reference genes

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