Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 0.0e+00 1771.5 874 100.0
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 0.0e+00 1567.0 891 89.5
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 1.7e-277 959.5 1012 57.2
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 1.0e-189 667.9 1131 40.8
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 6.3e-187 658.7 1078 41.3
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 2.7e-177 626.7 1143 39.5
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 1.5e-140 504.6 1175 33.4
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 3.8e-131 473.4 1176 31.5
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 3.3e-127 460.3 1006 33.7
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.3e-126 458.4 1129 32.4
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 2.8e-126 457.2 1307 30.0
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 8.1e-126 455.7 1222 30.9
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 4.0e-125 453.4 1315 29.8
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 3.8e-123 446.8 1342 29.7
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 7.9e-121 439.1 1138 31.6
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 7.9e-121 439.1 1299 29.4
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 5.3e-117 426.4 1011 34.2
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 1.5e-116 424.9 1223 29.3
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 2.2e-115 421.0 1214 30.3
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 4.2e-114 416.8 1252 29.3
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 9.7e-111 405.6 1158 29.7
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 1.3e-110 405.2 1137 28.8
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 9.0e-109 399.1 1165 30.0
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 1.3e-107 395.2 1284 28.4
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 1.9e-106 391.3 1176 28.6
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 3.2e-106 390.6 1309 28.3
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 1.4e-104 385.2 1287 28.5
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 3.9e-104 383.6 1299 27.6
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 5.1e-104 383.3 1181 28.5
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 5.1e-104 383.3 1295 28.5
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 4.3e-103 380.2 1165 28.9
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 7.4e-103 379.4 1265 28.5
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 7.4e-103 379.4 1200 27.9
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 1.7e-102 378.3 1225 28.2
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 2.2e-102 377.9 1381 27.3
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 2.2e-102 377.9 1198 29.0
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 1.5e-100 371.7 1226 28.0
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 1.0e-99 369.0 1202 28.9
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 5.0e-99 366.7 1203 27.6
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 1.9e-98 364.8 1131 27.1
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 5.5e-98 363.2 1210 28.4
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.6e-97 361.7 1265 27.8
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 2.1e-97 361.3 1249 27.2
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.3e-96 357.8 481 42.4
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 3.0e-96 357.5 1256 27.4
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 6.7e-96 356.3 1248 26.8
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 1.5e-95 355.1 439 44.0
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 3.3e-95 354.0 439 44.4
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 3.7e-94 350.5 1193 28.4
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 6.3e-94 349.7 1174 27.3
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 1.8e-93 348.2 1300 26.7
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 2.4e-93 347.8 1188 27.7
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 4.1e-93 347.1 1276 27.4
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 9.1e-93 345.9 1164 27.5
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.5e-92 343.6 1307 26.7
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 2.2e-91 341.3 1073 26.7
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 2.9e-91 340.9 1228 25.6
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 3.8e-91 340.5 1289 26.7
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 6.5e-91 339.7 1254 25.5
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 1.4e-90 338.6 1167 27.0
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 1.2e-89 335.5 1280 26.2
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 2.1e-89 334.7 1253 26.6
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 2.7e-89 334.3 1276 27.4
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 2.7e-89 334.3 1348 26.3
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 8.0e-89 332.8 1342 26.9
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 1.0e-88 332.4 539 37.5
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 5.2e-88 330.1 1222 26.4
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.1e-87 328.9 453 42.4
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 1.5e-87 328.6 1292 26.0
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 2.0e-87 328.2 1049 28.1
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.4e-87 327.0 1301 26.7
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 5.7e-87 326.6 1389 25.5
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 8.2e-86 322.8 1205 26.6
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 1.8e-85 321.6 1272 25.7
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 5.9e-84 316.6 1281 25.4
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 5.9e-84 316.6 1281 25.4
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 7.7e-84 316.2 445 40.2
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.3e-83 315.5 1140 28.8
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 2.2e-83 314.7 1344 25.4
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 6.5e-83 313.2 951 29.4
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 1.5e-82 312.0 1191 26.4
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.5e-82 312.0 1297 26.4
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.6e-81 308.5 415 41.7
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 3.0e-80 304.3 913 27.7
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 4.0e-80 303.9 368 44.0
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 7.0e-77 293.1 338 46.2
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 9.1e-77 292.7 526 34.8
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 8.5e-75 286.2 414 37.9
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 5.5e-74 283.5 1104 25.7
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.6e-73 282.0 522 35.8
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 2.0e-71 275.0 233 55.4
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 4.4e-71 273.9 258 51.6
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 1.7e-70 271.9 397 37.5
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 3.7e-70 270.8 1170 24.6
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.2e-65 255.8 424 37.7
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 1.2e-63 249.2 468 33.8
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 2.0e-63 248.4 243 47.7
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 6.6e-59 233.4 980 26.3
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 4.1e-53 214.2 1160 23.4
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.1e-50 206.1 208 47.1
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 1.1e-50 206.1 208 47.1
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 1.9e-42 178.7 392 29.1
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 8.9e-40 169.9 459 32.0
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 1.1e-37 162.9 623 27.6
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 1.2e-36 159.5 605 30.2
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 3.5e-36 157.9 122 63.9
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.7e-35 155.6 199 49.2
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.9e-35 154.5 198 49.0
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 5.1e-35 154.1 311 33.4
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 3.3e-34 151.4 153 51.6
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 1.7e-30 139.0 266 39.5
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 2.5e-26 125.2 1040 21.8
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 3.3e-26 124.8 167 43.7
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 4.0e-24 117.9 184 39.1
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.5e-23 115.9 129 49.6
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.0e-23 115.5 128 47.7
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 6.9e-16 90.5 147 35.4
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.4e-13 82.8 66 57.6
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.2e-13 81.3 94 52.1
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.8e-11 75.9 65 53.8
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 5.1e-11 74.3 65 52.3
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 6.7e-11 73.9 169 32.0
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.9e-10 72.4 90 44.4
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 7.4e-10 70.5 78 47.4
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.4e-08 65.5 92 46.7


User provided reference genes

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