Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A01186 Erythranthe guttata HOM05D004942 ORTHO05D005687 0.0e+00 1784.2 884 100.0
Migut.A01205 Erythranthe guttata HOM05D004942 ORTHO05D005687 0.0e+00 1565.4 891 89.5
Migut.L01173 Erythranthe guttata HOM05D004942 ORTHO05D005687 3.0e-269 932.2 1021 55.4
SalBow2G1731 Salvia bowleyana HOM05D004942 ORTHO05D005687 6.4e-179 632.1 1129 39.6
SGA_v2.0_scaffold16G07813 Striga asiatica HOM05D004942 ORTHO05D005687 2.1e-177 627.1 1078 41.3
Oeu020362.1 Olea europaea HOM05D004942 ORTHO05D005687 1.9e-170 604.0 1145 39.3
Cc11_g11760 Coffea canephora HOM05D004942 ORTHO05D005687 6.3e-134 482.6 1176 32.1
HanXRQChr17g0568411 Helianthus annuus HOM05D004942 ORTHO05D005687 3.5e-124 450.3 1023 33.5
GSVIVG01012245001 Vitis vinifera HOM05D004942 ORTHO05D005687 2.2e-123 447.6 1181 31.6
Cfa008858 Carpinus fangiana HOM05D004942 ORTHO05D005687 5.5e-122 443.0 1309 29.7
Peaxi162Scf00175g00531 Petunia axillaris HOM05D004942 ORTHO05D005687 1.7e-118 431.4 1135 31.4
ECA234G0983 Erigeron canadensis HOM05D004942 ORTHO05D005687 8.2e-118 429.1 1142 31.5
Haze_11879 Corylus avellana HOM05D004942 ORTHO05D005687 1.4e-117 428.3 1314 29.7
CiPaw.06G093500 Carya illinoinensis HOM05D004942 ORTHO05D005687 3.1e-117 427.2 1223 30.8
QL03p073561 Quercus lobata HOM05D004942 ORTHO05D005687 2.1e-113 414.5 1297 29.1
Prupe.1G290000 Prunus persica HOM05D004942 ORTHO05D005687 1.0e-112 412.1 1255 28.7
unitig_26.g10284 Utricularia gibba HOM05D004942 ORTHO05D005687 5.2e-112 409.8 1018 33.8
Manes.01G026200 Manihot esculenta HOM05D004942 ORTHO05D005687 2.6e-111 407.5 1222 29.1
Rhsim09G0125700 Rhododendron simsii HOM05D004942 ORTHO05D005687 1.1e-109 402.1 1343 28.7
CANSAT64G2200 Cannabis sativa HOM05D004942 ORTHO05D005687 4.5e-108 396.7 1213 29.2
VMungo0251G2230 Vigna mungo HOM05D004942 ORTHO05D005687 5.9e-108 396.4 1140 28.8
Hma1.2p1_2519F.1_g323790 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 1.8e-104 384.8 1168 30.1
RcHm_v2.0_Chr4g0437911 Rosa chinensis HOM05D004942 ORTHO05D005687 6.8e-104 382.9 1285 28.1
TWI79G0892 Tripterygium wilfordii HOM05D004942 ORTHO05D005687 8.9e-104 382.5 1173 29.8
Potri.008G097700 Populus trichocarpa HOM05D004942 ORTHO05D005687 1.3e-102 378.6 1300 27.2
Cpa.g.sc1669.1 Carica papaya HOM05D004942 ORTHO05D005687 3.1e-101 374.0 1166 29.4
Gorai.008G175800 Gossypium raimondii HOM05D004942 ORTHO05D005687 3.1e-101 374.0 1265 29.2
Nitab4.5_0000027g0020 Nicotiana tabacum HOM05D004942 ORTHO05D005687 2.7e-100 370.9 1178 28.9
THA.LOC104822000 Tarenaya hassleriana HOM05D004942 ORTHO05D005687 4.5e-100 370.2 1182 28.5
Duzib251G0048 Durio zibethinus HOM05D004942 ORTHO05D005687 2.9e-99 367.5 1289 28.5
MD16G1059100 Malus domestica HOM05D004942 ORTHO05D005687 5.0e-99 366.7 1383 26.7
Sc04g0007460 Simmondsia chinensis HOM05D004942 ORTHO05D005687 1.1e-98 365.5 1309 27.5
MELO3C012244.2 Cucumis melo HOM05D004942 ORTHO05D005687 2.5e-98 364.4 1221 27.8
Thecc.02G326800 Theobroma cacao HOM05D004942 ORTHO05D005687 2.5e-98 364.4 1298 28.1
Nitab4.5_0003545g0010 Nicotiana tabacum HOM05D004942 ORTHO05D005687 9.5e-98 362.5 1203 29.2
Thhalv10006590m.g Eutrema salsugineum HOM05D004942 ORTHO05D005687 6.1e-97 359.8 1206 27.9
Psat4g122040 Pisum sativum HOM05D004942 ORTHO05D005687 6.1e-97 359.8 1122 27.2
Phvul.003G282800 Phaseolus vulgaris HOM05D004942 ORTHO05D005687 8.0e-97 359.4 1203 27.0
Sed0022979 Sechium edule HOM05D004942 ORTHO05D005687 3.0e-96 357.5 1249 26.9
EL10Ac6g15023 Beta vulgaris HOM05D004942 ORTHO05D005687 2.9e-94 350.9 1256 27.5
FAN22G2425 Fragaria x ananassa HOM05D004942 ORTHO05D005687 4.9e-94 350.1 1268 27.6
AT1G26330 Arabidopsis thaliana HOM05D004942 ORTHO05D005687 8.3e-94 349.4 1200 28.2
FvH4_4g29660 Fragaria vesca HOM05D004942 ORTHO05D005687 8.3e-94 349.4 1250 27.3
Hund25161 Selenicereus undatus HOM05D004942 ORTHO05D005687 2.4e-93 347.8 1227 27.9
Lalb_Chr09g0334721 Lupinus albus HOM05D004942 ORTHO05D005687 1.6e-92 345.1 1279 26.3
vmacro10440 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 2.7e-92 344.4 475 41.9
Glyma.16G091700 Glycine max HOM05D004942 ORTHO05D005687 3.5e-92 344.0 1178 27.1
FAN07G2875 Fragaria x ananassa HOM05D004942 ORTHO05D005687 5.0e-91 340.1 1302 26.7
Medtr8g066290 Medicago truncatula HOM05D004942 ORTHO05D005687 1.5e-90 338.6 1229 26.5
Sopen05g006850 Solanum pennellii HOM05D004942 ORTHO05D005687 3.3e-90 337.4 526 39.0
AL1G39420 Arabidopsis lyrata HOM05D004942 ORTHO05D005687 4.3e-90 337.0 1205 27.6
ClCG05G022730 Citrullus lanatus HOM05D004942 ORTHO05D005687 4.3e-90 337.0 1256 26.2
Solyc05g012060.4 Solanum lycopersicum HOM05D004942 ORTHO05D005687 7.3e-90 336.3 455 42.6
CARHR025590 Cardamine hirsuta HOM05D004942 ORTHO05D005687 9.5e-90 335.9 1194 27.6
Psat1g014920 Pisum sativum HOM05D004942 ORTHO05D005687 2.1e-89 334.7 1074 27.7
FAN12G1725 Fragaria x ananassa HOM05D004942 ORTHO05D005687 8.0e-89 332.8 1291 26.6
MBI16_g37883_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.1e-88 332.4 427 42.9
Lj4g0014066 Lotus japonicus HOM05D004942 ORTHO05D005687 2.0e-87 328.2 1166 27.4
Aqoxy4G01534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 4.4e-87 327.0 1308 25.8
Ciclev10033741m.g Citrus clementina HOM05D004942 ORTHO05D005687 7.5e-87 326.2 1189 27.5
Ah.03g138750 Amaranthus hybridus HOM05D004942 ORTHO05D005687 9.8e-87 325.9 1250 25.8
Nn3g17507 Nelumbo nucifera HOM05D004942 ORTHO05D005687 4.9e-86 323.6 531 36.9
PGR031G3471 Punica granatum HOM05D004942 ORTHO05D005687 5.4e-85 320.1 1222 26.4
BcaC05g26421 Brassica carinata HOM05D004942 ORTHO05D005687 2.7e-84 317.8 1268 27.1
BcaC05g26635 Brassica carinata HOM05D004942 ORTHO05D005687 7.8e-84 316.2 1264 27.1
AUR62003077 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.0e-83 314.3 450 39.8
C05p24600 Brassica napus HOM05D004942 ORTHO05D005687 1.1e-82 312.4 1273 26.9
BolC5t31196H Brassica oleracea HOM05D004942 ORTHO05D005687 1.1e-82 312.4 1273 26.9
AUR62007894 Chenopodium quinoa HOM05D004942 ORTHO05D005687 3.3e-82 310.8 478 38.7
Carub.0001s2467 Capsella rubella HOM05D004942 ORTHO05D005687 9.5e-82 309.3 1165 27.5
Hma1.2p1_0566F.1_g179990 Hydrangea macrophylla HOM05D004942 ORTHO05D005687 3.6e-81 307.4 1144 28.3
PSO017G2640 Papaver somniferum HOM05D004942 ORTHO05D005687 3.6e-81 307.4 1343 25.8
Sp1g22360 Schrenkiella parvula HOM05D004942 ORTHO05D005687 3.6e-81 307.4 1210 26.6
PSO478G0521 Papaver somniferum HOM05D004942 ORTHO05D005687 4.7e-81 307.0 1345 26.1
Aqoxy3G00534 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 6.2e-81 306.6 1302 26.0
Gohir.A12G159900 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.2e-81 306.6 446 40.6
Sabra08G0073900 Salix brachista HOM05D004942 ORTHO05D005687 1.1e-80 305.8 1346 25.3
BraA09t39480Z Brassica rapa HOM05D004942 ORTHO05D005687 3.1e-80 304.3 421 40.4
A09p39800 Brassica napus HOM05D004942 ORTHO05D005687 1.2e-79 302.4 421 40.1
COL.COLO4_27850 Corchorus olitorius HOM05D004942 ORTHO05D005687 1.2e-79 302.4 1041 28.4
Lsat_1_v5_gn_4_11720 Lactuca sativa HOM05D004942 ORTHO05D005687 3.7e-78 297.4 957 29.4
Ca_22664_v3 Cicer arietinum L. HOM05D004942 ORTHO05D005687 8.3e-78 296.2 915 27.3
MBI16_g47660_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 1.9e-77 295.0 338 46.2
Lj3A1029T37 Lonicera japonica HOM05D004942 ORTHO05D005687 1.2e-76 292.4 1298 25.8
DCAR_023750 Daucus carota HOM05D004942 ORTHO05D005687 1.6e-76 292.0 1190 26.5
TPR.G3371 Trifolium pratense HOM05D004942 ORTHO05D005687 3.0e-75 287.7 523 33.7
CAN.G707.24 Capsicum annuum HOM05D004942 ORTHO05D005687 6.6e-75 286.6 384 41.7
ATR0827G101 Amborella trichopoda HOM05D004942 ORTHO05D005687 6.2e-73 280.0 415 37.3
Gohir.D12G163200 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.2e-73 280.0 373 42.1
Os09g0101800 Oryza sativa ssp. japonica HOM05D004942 ORTHO05D005687 1.4e-72 278.9 1104 26.4
TAR629G1003 Trochodendron aralioides HOM05D004942 ORTHO05D005687 5.4e-69 266.9 259 50.6
Dinv34045 Davidia involucrata HOM05D004942 ORTHO05D005687 2.7e-68 264.6 236 53.4
HPP92_000888 Vanilla planifolia HOM05D004942 ORTHO05D005687 6.6e-67 260.0 445 34.4
Zm00001eb095700 Zea mays HOM05D004942 ORTHO05D005687 3.3e-66 257.7 1177 25.1
Actinidia28654 Actinidia chinensis HOM05D004942 ORTHO05D005687 1.9e-61 241.9 695 29.8
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 2.3e-59 235.0 426 33.6
Atru.chr11.1596 Acer truncatum HOM05D004942 ORTHO05D005687 6.6e-59 233.4 243 46.5
CsaV3_5G034290 Cucumis sativus L. HOM05D004942 ORTHO05D005687 9.6e-58 229.6 981 25.4
CSS0007829 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.9e-46 191.4 221 43.9
CSS0011617 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.9e-46 191.4 221 43.9
Aa31LG7G8720 Aethionema arabicum HOM05D004942 ORTHO05D005687 1.1e-45 189.5 1163 23.8
CDE11G1026 Ceratophyllum demersum HOM05D004942 ORTHO05D005687 1.0e-38 166.4 393 28.0
SHI10798 Sapria himalayana HOM05D004942 ORTHO05D005687 1.3e-38 166.0 641 27.0
Actinidia27212 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.5e-36 157.9 191 49.2
MSTRG.7735 Avicennia marina HOM05D004942 ORTHO05D005687 3.5e-36 157.9 122 63.9
Atru.chr11.1595 Acer truncatum HOM05D004942 ORTHO05D005687 1.8e-35 155.6 454 31.5
Actinidia28653 Actinidia chinensis HOM05D004942 ORTHO05D005687 3.9e-35 154.5 199 49.2
TPR.G31934 Trifolium pratense HOM05D004942 ORTHO05D005687 2.5e-34 151.8 317 33.4
TAR629G1720 Trochodendron aralioides HOM05D004942 ORTHO05D005687 3.3e-34 151.4 153 51.6
Gohir.A12G159850 Gossypium hirsutum HOM05D004942 ORTHO05D005687 6.3e-33 147.1 165 50.3
vmacro10441 Vaccinium macrocarpon HOM05D004942 ORTHO05D005687 6.3e-33 147.1 233 41.2
SEGI_21482 Sequoiadendron giganteum HOM05D004942 ORTHO05D005687 2.5e-26 125.2 167 43.7
SMO269G0037 Selaginella moellendorffii HOM05D004942 ORTHO05D005687 3.1e-24 118.2 1002 22.1
Gorai.012G127400 Gossypium raimondii HOM05D004942 ORTHO05D005687 1.5e-23 115.9 129 49.6
Gohir.D12G163150 Gossypium hirsutum HOM05D004942 ORTHO05D005687 2.0e-23 115.5 128 47.7
Mapoly0001s0391 Marchantia polymorpha HOM05D004942 ORTHO05D005687 2.6e-23 115.2 184 38.0
GSVIVG01026037001 Vitis vinifera HOM05D004942 ORTHO05D005687 7.0e-16 90.5 154 35.1
GSVIVG01015130001 Vitis vinifera HOM05D004942 ORTHO05D005687 8.5e-14 83.6 66 57.6
CSS0006420 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.2e-13 81.3 94 52.1
GSVIVG01037061001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.4e-11 76.3 65 53.8
GSVIVG01026043001 Vitis vinifera HOM05D004942 ORTHO05D005687 1.8e-11 75.9 65 53.8
MBI16_g47661_MAGBIO Magnolia biondii HOM05D004942 ORTHO05D005687 2.0e-10 72.4 90 44.4
Aqoxy4G01498 Aquilegia oxysepala HOM05D004942 ORTHO05D005687 2.2e-09 68.9 78 46.2
CSS0004641 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 4.8e-09 67.8 169 29.6
CSS0033973 Camellia sinensis var. sinensis HOM05D004942 ORTHO05D005687 2.4e-08 65.5 92 46.7


User provided reference genes

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