Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 5.3e-215 750.7 378 100.0
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 1.5e-68 264.2 436 41.7
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 3.0e-61 240.0 439 39.2
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 2.7e-57 226.9 448 37.9
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 5.2e-45 186.0 453 36.0
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 2.0e-44 184.1 443 35.0
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 6.6e-40 169.1 476 33.2
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 1.1e-34 151.8 392 33.2
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 2.0e-33 147.5 438 31.7
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 2.0e-33 147.5 447 33.1
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 4.6e-33 146.4 410 32.4
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 4.6e-33 146.4 447 32.4
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 4.6e-33 146.4 394 33.0
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 6.0e-33 146.0 423 32.2
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 3.0e-32 143.7 449 30.7
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 1.5e-31 141.4 395 33.4
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 2.5e-31 140.6 448 31.7
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 5.6e-31 139.4 392 32.9
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 7.3e-31 139.0 439 30.3
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 9.5e-31 138.7 476 31.3
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 2.1e-30 137.5 404 33.2
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 3.6e-30 136.7 437 30.9
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 1.4e-29 134.8 438 32.2
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 1.8e-29 134.4 465 30.3
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 1.8e-29 134.4 381 31.0
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 8.9e-29 132.1 336 33.6
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 1.5e-28 131.3 394 31.7
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 6.4e-27 125.9 417 30.2
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 8.3e-27 125.6 435 31.0
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 8.3e-27 125.6 403 31.8
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 3.2e-26 123.6 441 30.4
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 4.1e-26 123.2 420 30.0
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 4.1e-26 123.2 448 29.0
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 5.4e-26 122.9 417 30.9
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 2.1e-25 120.9 408 28.4
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 2.1e-25 120.9 408 28.4
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 4.6e-25 119.8 409 30.8
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 4.6e-25 119.8 397 30.7
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 4.6e-25 119.8 394 29.7
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 6.0e-25 119.4 410 30.2
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 1.3e-24 118.2 387 30.0
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 1.3e-24 118.2 458 27.7
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 1.7e-24 117.9 412 30.3
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 3.0e-24 117.1 390 32.3
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 5.1e-24 116.3 442 29.6
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 5.1e-24 116.3 424 30.2
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 6.6e-24 115.9 383 30.5
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 6.6e-24 115.9 395 30.1
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 6.6e-24 115.9 406 30.0
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 8.6e-24 115.5 424 31.1
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 1.1e-23 115.2 393 30.8
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 1.5e-23 114.8 382 30.6
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 2.5e-23 114.0 390 29.0
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 4.3e-23 113.2 380 28.7
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 5.6e-23 112.8 435 29.2
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 7.3e-23 112.5 446 26.9
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 9.5e-23 112.1 394 28.4
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.2e-22 111.7 429 29.4
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 2.1e-22 110.9 405 29.1
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 6.2e-22 109.4 393 30.8
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 8.1e-22 109.0 430 29.8
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 1.1e-21 108.6 424 28.3
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.4e-21 108.2 434 30.2
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 2.4e-21 107.5 412 27.9
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 3.1e-21 107.1 314 32.5
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 4.0e-21 106.7 402 29.4
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 5.2e-21 106.3 378 28.6
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 6.8e-21 105.9 183 38.8
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 1.2e-20 105.1 432 28.9
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 3.4e-20 103.6 503 27.4
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 7.6e-20 102.4 405 27.9
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.2e-19 100.9 422 28.4
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 4.9e-19 99.8 386 28.8
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 4.9e-19 99.8 137 42.3
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 8.4e-19 99.0 361 30.2
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 5.4e-18 96.3 365 29.6
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 1.6e-17 94.7 508 26.8
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 2.7e-17 94.0 444 27.7
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 3.5e-17 93.6 400 27.8
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 4.6e-17 93.2 284 29.2
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 7.8e-17 92.4 407 29.0
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 7.8e-17 92.4 435 29.2
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 1.0e-16 92.0 448 27.9
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 2.3e-16 90.9 371 28.6
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 8.7e-16 89.0 403 28.3
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.5e-15 88.2 294 29.6
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 1.2e-14 85.1 313 27.2
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 1.6e-14 84.7 442 26.7
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 2.8e-14 84.0 277 28.9
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 4.7e-14 83.2 298 28.9
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 5.2e-13 79.7 303 28.1
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 5.2e-13 79.7 414 25.6
Cpa.g.sc89.13 Carica papaya HOM05D007047 ORTHO05D009177 2.6e-12 77.4 124 41.9
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 2.9e-11 73.9 117 35.9
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 2.9e-11 73.9 129 42.6
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 3.8e-11 73.6 402 26.1
Sc07g0009150 Simmondsia chinensis HOM05D007047 ORTHO05D009177 1.9e-10 71.2 160 37.5
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 3.5e-09 67.0 275 28.0
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 4.6e-09 66.6 57 49.1
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 3.0e-08 63.9 123 31.7
Os11g0249300 Oryza sativa ssp. japonica HOM05D007047 ORTHO05D009177 3.9e-08 63.5 421 23.3
Thhalv10027163m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 8.7e-08 62.4 56 50.0
Psat2g156960 Pisum sativum HOM05D007047 ORTHO05D009177 7.3e-07 59.3 130 36.9
Cpa.g.sc1463.1 Carica papaya HOM05D007047 ORTHO05D009177 2.8e-06 57.4 108 38.0


User provided reference genes

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