Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.5e-164 582.8 300 100.0
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 1.5e-164 582.8 300 100.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 3.5e-161 571.6 300 98.0
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 8.1e-126 454.1 300 74.7
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.8e-125 453.0 300 75.7
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 2.4e-125 452.6 300 75.3
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 6.9e-125 451.1 299 75.6
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 9.0e-125 450.7 300 75.0
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.2e-124 450.3 300 76.3
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 1.2e-124 450.3 300 74.0
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 4.5e-124 448.4 300 75.7
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 2.2e-123 446.0 300 73.3
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 4.9e-123 444.9 300 73.7
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 1.2e-121 440.3 300 73.3
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 1.6e-121 439.9 302 73.2
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 2.7e-121 439.1 300 72.0
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 3.9e-120 435.3 300 74.0
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 6.7e-120 434.5 300 71.7
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 8.7e-120 434.1 300 72.0
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 1.5e-119 433.3 303 73.3
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.9e-119 433.0 301 72.8
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 1.9e-119 433.0 300 73.0
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 1.9e-119 433.0 289 76.8
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 1.9e-119 433.0 289 76.8
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 2.5e-119 432.6 300 74.0
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 9.6e-119 430.6 300 72.0
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 1.3e-118 430.3 300 71.7
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 1.6e-118 429.9 292 75.0
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-118 429.9 308 70.8
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 3.7e-118 428.7 297 71.7
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 3.7e-118 428.7 313 70.0
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 8.1e-118 427.6 289 75.4
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 1.4e-117 426.8 300 71.0
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 1.8e-117 426.4 300 70.3
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.8e-117 426.4 297 70.4
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 1.8e-117 426.4 300 70.0
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 2.4e-117 426.0 300 70.3
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 2.4e-117 426.0 300 70.3
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 2.4e-117 426.0 299 71.9
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 2.4e-117 426.0 300 72.3
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 3.1e-117 425.6 300 70.3
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.2e-116 423.7 297 70.0
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 1.2e-116 423.7 304 71.1
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 1.2e-116 423.7 304 71.1
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 2.0e-116 422.9 300 72.0
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 2.0e-116 422.9 300 72.3
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 2.6e-116 422.5 305 71.5
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 3.4e-116 422.2 300 69.3
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 7.6e-116 421.0 303 70.6
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.3e-115 420.2 297 69.7
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.7e-115 419.9 283 74.9
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 2.9e-115 419.1 300 70.0
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 8.4e-115 417.5 300 69.3
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 2.5e-114 416.0 297 69.0
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 1.2e-113 413.7 303 68.3
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 5.1e-112 408.3 289 72.7
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 5.1e-112 408.3 301 69.8
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 6.7e-112 407.9 216 98.1
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.1e-111 407.1 280 72.1
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 4.3e-111 405.2 374 58.3
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 4.8e-110 401.7 301 68.1
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 9.0e-109 397.5 300 66.3
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 1.2e-108 397.1 357 59.4
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 2.6e-108 396.0 299 67.2
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 5.5e-106 388.3 271 72.0
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 1.0e-104 384.0 297 66.3
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 1.0e-104 384.0 258 76.7
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.9e-104 382.1 269 74.0
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 3.9e-104 382.1 278 71.6
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 8.7e-104 380.9 302 68.2
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 2.5e-103 379.4 310 64.8
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 6.3e-102 374.8 285 68.8
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 4.1e-101 372.1 303 63.7
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 2.0e-100 369.8 313 61.3
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 4.5e-100 368.6 313 61.3
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 1.0e-99 367.5 297 63.6
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 3.2e-98 362.5 261 72.8
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.0e-96 357.5 328 58.2
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.4e-96 357.1 269 69.5
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 8.8e-96 354.4 191 94.8
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 4.3e-95 352.1 294 63.6
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 9.7e-95 350.9 299 60.2
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.8e-94 348.6 289 65.1
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 1.4e-93 347.1 331 57.4
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 3.1e-93 345.9 293 60.8
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.1e-93 345.9 271 67.9
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 5.3e-93 345.1 206 86.9
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.5e-92 343.6 285 65.6
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.7e-91 340.1 313 58.1
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 6.5e-91 338.2 300 60.7
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 1.1e-90 337.4 313 57.8
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 2.7e-89 332.8 300 57.3
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 7.9e-89 331.3 300 59.3
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 1.8e-88 330.1 228 75.9
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.8e-88 330.1 301 56.5
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 1.1e-87 327.4 214 78.5
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 2.2e-86 323.2 281 60.9
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 1.8e-85 320.1 283 60.8
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 4.1e-85 318.9 240 70.0
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 1.5e-82 310.5 301 57.1
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 4.7e-81 305.4 345 51.0
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 2.6e-79 299.7 301 54.2
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 2.2e-78 296.6 277 60.3
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 3.7e-78 295.8 189 78.3
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 7.0e-77 291.6 204 75.5
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 7.7e-76 288.1 198 72.2
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 1.8e-72 276.9 290 51.7
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 1.2e-71 274.2 230 62.2
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 2.8e-70 269.6 220 67.3
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 1.4e-69 267.3 290 50.3
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 1.4e-69 267.3 291 49.1
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 7.0e-69 265.0 151 87.4
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 7.7e-68 261.5 194 72.7
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 1.9e-66 256.9 188 70.7
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 1.2e-60 237.7 423 39.0
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 1.5e-58 230.7 286 45.5
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 3.2e-53 213.0 162 64.8
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 7.8e-52 208.4 150 72.0
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 5.8e-47 192.2 291 43.0
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.3e-43 181.0 143 63.6
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 4.4e-39 166.0 161 58.4
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 7.1e-37 158.7 96 86.5
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 4.6e-36 156.0 287 35.5
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.2e-31 141.4 153 48.4
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.2e-31 141.4 153 48.4
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 3.8e-30 136.3 76 85.5
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 1.2e-28 131.3 77 80.5
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.6e-28 131.0 80 78.8
Lj3g0020155 Lotus japonicus HOM05D004498 ORTHO05D005300 3.9e-27 126.3 98 69.4
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 1.5e-26 124.4 74 79.7
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.8e-24 117.5 112 53.6
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 1.8e-24 117.5 97 57.7
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 2.4e-24 117.1 97 54.6
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 1.1e-21 108.2 205 34.1
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 4.2e-21 106.3 261 31.0
SalBow8G0163 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.2e-20 104.8 63 88.9
SalBow8G4260 Salvia bowleyana HOM05D004498 ORTHO05D005300 1.2e-20 104.8 63 88.9
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.7e-19 100.9 67 76.1
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 7.3e-18 95.5 78 52.6
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 1.3e-17 94.7 56 83.9
PGR142G0681 Punica granatum HOM05D004498 ORTHO05D005300 7.6e-15 85.5 80 60.0
Rhsim07G0010100 Rhododendron simsii HOM05D004498 ORTHO05D005300 3.8e-14 83.2 69 69.6
CSS0021260 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 1.4e-13 81.3 50 80.0


User provided reference genes

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