Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 2.3e-123 445.7 241 100.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.3e-99 365.9 241 77.2
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.3e-99 365.9 240 81.2
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.3e-99 365.9 240 76.2
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 2.9e-97 359.0 239 73.6
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.4e-97 357.8 243 74.1
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 5.4e-96 354.8 238 74.8
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 2.0e-95 352.8 241 73.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.7e-95 352.4 241 73.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 7.8e-95 350.9 239 74.5
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.3e-94 350.1 241 73.0
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 3.0e-94 349.0 241 73.4
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 5.0e-94 348.2 303 64.4
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 8.6e-94 347.4 238 72.3
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.1e-93 347.1 239 73.6
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.3e-93 345.5 238 73.1
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 5.6e-93 344.7 241 71.8
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 5.6e-93 344.7 241 72.6
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.2e-92 343.6 238 72.7
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.2e-92 343.6 243 72.0
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 6.2e-92 341.3 240 70.8
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 8.1e-92 340.9 239 73.2
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 8.1e-92 340.9 239 73.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.1e-91 340.5 236 72.9
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.1e-91 340.5 242 72.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.4e-91 340.1 240 70.8
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.8e-91 339.7 239 73.2
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.1e-91 339.0 238 71.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 5.2e-91 338.2 240 70.0
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.8e-91 337.8 241 71.0
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 8.9e-91 337.4 240 70.4
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.0e-90 336.3 240 72.1
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.4e-90 335.5 239 72.0
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 7.5e-90 334.3 242 70.7
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 1.3e-89 333.6 237 70.0
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 2.2e-89 332.8 237 69.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.9e-89 332.4 240 69.2
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 3.7e-89 332.0 236 71.6
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 8.3e-89 330.9 236 69.9
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 1.9e-88 329.7 233 72.1
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 3.2e-88 328.9 240 70.4
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.1e-88 328.6 238 68.9
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 5.4e-88 328.2 306 58.8
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 9.2e-88 327.4 241 69.3
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.2e-87 327.0 241 69.3
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.1e-87 326.2 238 70.6
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 3.5e-87 325.5 239 68.2
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 6.0e-87 324.7 178 84.8
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 7.8e-87 324.3 232 69.8
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.8e-87 324.3 238 68.9
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.0e-86 323.9 241 68.9
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.0e-86 323.9 240 66.7
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.3e-86 323.6 237 67.9
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.3e-86 323.6 240 68.3
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.7e-86 323.2 240 67.9
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.7e-86 323.2 284 60.9
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.5e-85 320.1 241 71.4
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.3e-85 318.5 242 67.4
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.2e-84 317.0 239 68.6
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 3.1e-83 312.4 237 67.5
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 8.9e-83 310.8 236 66.5
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 8.9e-83 310.8 236 66.5
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.6e-82 309.3 236 66.5
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.6e-82 309.3 249 65.1
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 2.6e-82 309.3 240 65.0
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 2.6e-82 309.3 184 78.8
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 3.4e-82 308.9 242 72.3
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 4.4e-82 308.5 276 59.4
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 5.8e-82 308.1 236 66.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 5.8e-82 308.1 236 66.1
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 7.6e-82 307.8 249 65.5
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 7.6e-82 307.8 236 66.9
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 9.9e-82 307.4 238 65.1
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 9.9e-82 307.4 186 77.4
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.3e-81 307.0 236 66.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 2.2e-81 306.2 241 67.2
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 4.9e-81 305.1 236 65.3
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 6.4e-81 304.7 236 66.5
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.4e-81 304.7 236 66.9
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 6.4e-81 304.7 234 65.0
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.1e-80 303.9 235 66.8
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.2e-80 302.4 267 60.7
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 2.7e-79 299.3 215 70.2
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 6.0e-79 298.1 241 66.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 8.6e-78 294.3 238 63.0
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.5e-77 293.5 240 71.2
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.8e-76 289.3 236 61.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.2e-73 279.6 239 60.7
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 9.3e-72 274.2 239 60.7
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 5.1e-70 268.5 253 56.9
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.1e-69 267.3 210 65.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 5.6e-69 265.0 238 57.1
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.6e-68 263.5 163 76.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.1e-67 259.2 182 64.8
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 1.2e-66 257.3 179 67.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 2.6e-66 256.1 180 67.2
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.1e-64 250.8 394 40.9
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.4e-64 248.4 200 64.5
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 1.2e-63 247.3 240 56.7
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 2.7e-63 246.1 167 77.8
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.9e-61 240.0 193 66.3
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.1e-56 224.2 183 58.5
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.3e-46 189.9 182 48.9
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.3e-44 184.1 183 62.3
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.9e-41 172.9 162 60.5
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.3e-38 164.1 164 55.5
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.2e-36 156.8 133 61.7
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.2e-36 156.8 133 61.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.2e-36 156.8 141 61.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 9.0e-35 151.4 181 41.4
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 5.9e-34 148.7 165 47.9
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 2.8e-28 129.8 149 50.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 6.9e-27 125.2 149 49.0
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.8e-22 110.5 82 68.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.0e-21 107.1 139 43.9
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 2.0e-21 107.1 110 56.4
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 2.4e-19 100.1 54 81.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 5.3e-19 99.0 107 56.1
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.6e-18 97.4 111 51.4
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.8e-14 84.0 109 48.6
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 3.1e-11 73.2 52 59.6
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 5.3e-11 72.4 48 64.6


User provided reference genes

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