Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 3.9e-179 631.3 316 100.0
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 4.2e-141 505.0 319 80.6
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 2.9e-126 455.7 268 82.8
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 3.8e-126 455.3 307 74.3
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 1.0e-123 447.2 268 81.3
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 3.4e-122 442.2 269 79.2
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 3.4e-122 442.2 269 79.2
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 1.3e-121 440.3 277 76.5
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 2.8e-121 439.1 294 75.5
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 8.3e-121 437.6 276 76.4
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 1.4e-120 436.8 268 78.0
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 4.1e-120 435.3 261 80.8
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 5.4e-120 434.9 274 77.0
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 5.4e-120 434.9 298 74.5
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 7.0e-120 434.5 294 74.5
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 1.6e-119 433.3 295 71.5
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 2.0e-119 433.0 286 75.9
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 4.5e-119 431.8 259 80.3
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 4.5e-119 431.8 275 74.9
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 5.9e-119 431.4 271 78.6
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 5.0e-118 428.3 289 71.3
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 5.6e-117 424.9 289 73.0
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 9.5e-117 424.1 262 76.7
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 9.5e-117 424.1 262 76.7
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 9.5e-117 424.1 296 70.6
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 9.5e-117 424.1 264 76.1
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 1.2e-116 423.7 280 73.6
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.6e-116 423.3 271 75.6
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 2.1e-116 422.9 280 72.9
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 2.8e-116 422.5 268 75.4
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 3.6e-116 422.2 287 71.4
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 2.3e-115 419.5 292 70.2
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 6.8e-115 417.9 305 68.9
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 2.6e-114 416.0 318 67.9
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 2.6e-114 416.0 267 74.2
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 3.4e-114 415.6 270 73.0
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 4.4e-114 415.2 277 71.1
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 4.4e-114 415.2 287 70.7
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 9.8e-114 414.1 291 69.4
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.7e-113 413.3 274 73.0
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 8.3e-113 411.0 287 71.4
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.9e-112 409.8 290 69.3
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 4.1e-112 408.7 279 72.0
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 5.4e-112 408.3 280 69.6
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 7.0e-112 407.9 291 69.4
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.2e-111 407.1 279 71.7
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 1.2e-111 407.1 312 65.7
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 1.6e-111 406.8 287 67.2
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 1.6e-111 406.8 299 68.2
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 2.0e-111 406.4 288 68.8
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 2.7e-111 406.0 279 69.2
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 2.7e-111 406.0 271 73.4
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 2.7e-111 406.0 273 71.8
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 6.0e-111 404.8 315 64.4
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 7.8e-111 404.4 316 64.2
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 1.0e-110 404.1 279 71.0
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 1.0e-110 404.1 275 69.5
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 1.3e-110 403.7 289 68.2
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 1.3e-110 403.7 273 70.7
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 3.0e-110 402.5 287 67.2
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 5.0e-110 401.7 274 71.5
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 8.6e-110 401.0 325 63.1
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 1.9e-109 399.8 289 69.2
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 1.9e-109 399.8 286 68.5
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 1.9e-109 399.8 324 64.5
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 3.3e-109 399.1 286 65.4
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 3.3e-109 399.1 295 67.8
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 3.3e-109 399.1 292 68.2
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 7.3e-109 397.9 276 71.0
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 3.6e-108 395.6 272 69.9
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 6.2e-108 394.8 305 64.6
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 6.2e-108 394.8 272 69.9
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 8.0e-108 394.4 281 68.0
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 1.4e-107 393.7 310 63.9
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.8e-107 393.3 296 66.2
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 2.3e-107 392.9 233 81.1
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 2.3e-107 392.9 276 68.1
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 5.2e-107 391.7 231 82.7
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 6.8e-107 391.3 296 65.9
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.2e-106 390.6 273 70.0
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.2e-106 390.6 273 70.0
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 1.5e-106 390.2 262 69.1
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.3e-105 387.1 271 69.0
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 1.7e-105 386.7 296 64.9
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 6.4e-105 384.8 270 68.1
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 8.3e-105 384.4 231 79.7
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 2.1e-103 379.8 307 63.8
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 2.1e-103 379.8 230 77.8
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 1.7e-102 376.7 315 59.0
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 6.6e-102 374.8 291 64.3
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-100 369.8 238 73.1
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 2.1e-100 369.8 232 74.1
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 8.1e-100 367.9 381 53.3
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 4.0e-99 365.5 279 66.7
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 6.0e-95 351.7 194 87.1
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 8.6e-94 347.8 284 62.0
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 8.6e-94 347.8 262 65.6
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 3.4e-90 335.9 256 62.1
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 2.5e-85 319.7 253 60.1
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 9.6e-85 317.8 197 75.1
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 8.1e-84 314.7 237 64.6
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 1.4e-83 313.9 255 58.8
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 1.7e-81 307.0 243 67.1
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 1.5e-74 283.9 200 70.0
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 2.6e-74 283.1 226 64.6
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 4.5e-74 282.3 197 66.5
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 6.0e-71 271.9 228 60.5
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 2.2e-65 253.4 187 67.4
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 5.5e-64 248.8 202 61.9
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 9.6e-61 238.0 201 62.7
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 3.7e-60 236.1 157 70.1
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 4.8e-60 235.7 174 67.2
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 1.2e-58 231.1 199 56.3
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 5.8e-58 228.8 130 86.9
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 1.7e-57 227.3 177 66.1
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 4.2e-56 222.6 172 66.3
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 1.0e-49 201.4 122 73.8
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 2.9e-49 199.9 229 49.3
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 5.3e-43 179.1 157 58.0
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-42 177.6 156 58.3
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-42 176.8 157 58.0
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-42 176.8 157 57.3
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 7.7e-42 175.3 173 53.8
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 7.7e-42 175.3 157 57.3
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.3e-41 174.5 157 58.6
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 6.5e-41 172.2 113 76.1
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-40 170.6 221 46.2
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-39 167.2 158 55.1
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 1.7e-36 157.5 100 76.0
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 8.2e-36 155.2 144 56.2
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 1.5e-34 151.0 157 52.2
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 2.6e-34 150.2 99 73.7
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 3.8e-33 146.4 88 73.9
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 6.5e-33 145.6 176 50.0
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-32 144.1 160 50.0
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 1.9e-32 144.1 160 50.0
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 2.5e-32 143.7 94 75.5
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 4.2e-32 142.9 228 39.9
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 3.6e-31 139.8 95 72.6
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-30 137.9 125 56.8
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 1.4e-30 137.9 123 57.7
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 4.1e-27 126.3 74 77.0
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-23 114.0 157 43.3
SalBow6G4210 Salvia bowleyana HOM05D004703 ORTHO05D005801 2.1e-23 114.0 156 46.8
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 2.7e-23 113.6 109 53.2
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 4.1e-19 99.8 70 71.4
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-18 97.4 133 40.6
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 6.5e-17 92.4 57 77.2
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 3.6e-15 86.7 101 45.5
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 1.0e-14 85.1 89 50.6
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 5.2e-14 82.8 55 61.8
Oeu044815.2 Olea europaea HOM05D002525 ORTHO05D002727 6.6e-09 65.9 34 82.4
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 6.8e-06 55.8 111 30.6
Duzib205G0541 Durio zibethinus HOM05D004703 ORTHO05D005801 6.8e-06 55.8 145 34.5


User provided reference genes

Program Settings