Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00845 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.7e-68 261.9 136 100.0
Migut.A00847 Erythranthe guttata HOM05D004041 ORTHO05D004564 2.7e-68 261.9 136 100.0
SGA_v2.0_scaffold121G33039 Striga asiatica HOM05D003985 ORTHO05D005253 1.3e-33 146.7 149 59.1
Migut.E01401 Erythranthe guttata HOM05D004041 ORTHO05D004564 6.9e-32 141.0 147 57.1
TAR383G1094 Trochodendron aralioides HOM05D004041 ORTHO05D004564 4.5e-31 138.3 147 55.1
arahy.Tifrunner.gnm1.ann1.1H4CIU Arachis hypogaea HOM05D004041 ORTHO05D004564 1.3e-30 136.7 149 57.0
Nitab4.5_0000288g0130 Nicotiana tabacum HOM05D004041 ORTHO05D004564 1.3e-30 136.7 148 57.4
SalBow8G3032 Salvia bowleyana HOM05D004041 ORTHO05D004564 2.2e-30 136.0 149 55.7
Lalb_Chr23g0268921 Lupinus albus HOM05D004041 ORTHO05D004564 2.9e-30 135.6 146 56.2
Nitab4.5_0008752g0030 Nicotiana tabacum HOM05D004041 ORTHO05D004564 2.9e-30 135.6 149 56.4
Peaxi162Scf00213g01515 Petunia axillaris HOM05D004041 ORTHO05D004564 3.8e-30 135.2 152 57.9
GSVIVG01035595001 Vitis vinifera HOM05D004041 ORTHO05D004564 4.9e-30 134.8 149 53.7
Lj1g0018267 Lotus japonicus HOM05D004041 ORTHO05D004564 1.4e-29 133.3 144 56.2
Lalb_Chr11g0064071 Lupinus albus HOM05D004041 ORTHO05D004564 1.4e-29 133.3 148 54.7
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 3.2e-29 132.1 146 54.8
Manes.03G046500 Manihot esculenta HOM05D004041 ORTHO05D004564 3.2e-29 132.1 153 54.9
Phvul.001G088700 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 3.2e-29 132.1 146 56.8
Phvul.006G038688 Phaseolus vulgaris HOM05D004041 ORTHO05D004564 9.3e-29 130.6 144 55.6
Psat6g031640 Pisum sativum HOM05D004041 ORTHO05D004564 1.6e-28 129.8 149 55.0
PGSC0003DMG401029567 Solanum tuberosum HOM05D004041 ORTHO05D004564 1.6e-28 129.8 145 54.5
Glyma.17G200600 Glycine max HOM05D004041 ORTHO05D004564 2.1e-28 129.4 147 55.1
HanXRQChr10g0299041 Helianthus annuus HOM05D004041 ORTHO05D004564 2.1e-28 129.4 152 51.3
Potri.006G233000 Populus trichocarpa HOM05D004041 ORTHO05D004564 2.1e-28 129.4 151 55.6
Hund03240 Selenicereus undatus HOM05D004041 ORTHO05D004564 2.1e-28 129.4 153 52.3
Sabra06G0181500 Salix brachista HOM05D004041 ORTHO05D004564 2.7e-28 129.0 151 55.6
Sopen08g023080 Solanum pennellii HOM05D004041 ORTHO05D004564 3.5e-28 128.6 145 54.5
CSS0017741 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 4.6e-28 128.3 140 53.6
Sc06g0000040 Simmondsia chinensis HOM05D004041 ORTHO05D004564 4.6e-28 128.3 154 49.4
Sc06g0001360 Simmondsia chinensis HOM05D004041 ORTHO05D004564 4.6e-28 128.3 154 49.4
Actinidia12476 Actinidia chinensis HOM05D004041 ORTHO05D004564 6.0e-28 127.9 147 55.8
DCAR_004521 Daucus carota HOM05D004041 ORTHO05D004564 6.0e-28 127.9 149 51.0
THA.LOC104799001 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 6.0e-28 127.9 142 55.6
VMungo1383G3608 Vigna mungo HOM05D004041 ORTHO05D004564 6.0e-28 127.9 146 54.1
Ca_12887_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 7.9e-28 127.5 142 55.6
Glyma.14G131900 Glycine max HOM05D004041 ORTHO05D004564 1.0e-27 127.1 146 54.8
Solyc08g074440.4 Solanum lycopersicum HOM05D004041 ORTHO05D004564 1.0e-27 127.1 145 53.8
TWI15G0012 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 1.0e-27 127.1 147 52.4
Cc03_g09420 Coffea canephora HOM05D004041 ORTHO05D004564 1.3e-27 126.7 154 51.3
CAN.G195.14 Capsicum annuum HOM05D004041 ORTHO05D004564 3.0e-27 125.6 146 53.4
PSO210G2134 Papaver somniferum HOM05D004041 ORTHO05D004564 3.9e-27 125.2 139 53.2
CiPaw.07G215400 Carya illinoinensis HOM05D004041 ORTHO05D004564 5.1e-27 124.8 148 50.7
MD08G1133100 Malus domestica HOM05D004041 ORTHO05D004564 8.7e-27 124.0 151 50.3
MD15G1111100 Malus domestica HOM05D004041 ORTHO05D004564 8.7e-27 124.0 149 50.3
PSO541G4756 Papaver somniferum HOM05D004041 ORTHO05D004564 8.7e-27 124.0 147 52.4
Lsat_1_v5_gn_4_74560 Lactuca sativa HOM05D004041 ORTHO05D004564 1.1e-26 123.6 147 50.3
PSO832G4585 Papaver somniferum HOM05D004041 ORTHO05D004564 1.1e-26 123.6 141 52.5
CsaV3_2G031560 Cucumis sativus L. HOM05D004041 ORTHO05D004564 1.5e-26 123.2 152 49.3
Sed0021561 Sechium edule HOM05D004041 ORTHO05D004564 1.5e-26 123.2 153 47.7
Oeu026036.1 Olea europaea HOM05D004041 ORTHO05D004564 1.9e-26 122.9 119 58.0
Atru.chr4.1391 Acer truncatum HOM05D004041 ORTHO05D004564 2.5e-26 122.5 153 49.0
CARHR158630 Cardamine hirsuta HOM05D004041 ORTHO05D004564 2.5e-26 122.5 145 55.2
PGR119G2538 Punica granatum HOM05D004041 ORTHO05D004564 2.5e-26 122.5 151 51.0
AL5G29450 Arabidopsis lyrata HOM05D004041 ORTHO05D004564 4.3e-26 121.7 147 51.0
ECA234G4028 Erigeron canadensis HOM05D004041 ORTHO05D004564 4.3e-26 121.7 144 50.7
Thhalv10010217m.g Eutrema salsugineum HOM05D004041 ORTHO05D004564 4.3e-26 121.7 148 52.0
ClCG08G012810 Citrullus lanatus HOM05D004041 ORTHO05D004564 5.7e-26 121.3 151 49.7
Prupe.1G463200 Prunus persica HOM05D004041 ORTHO05D004564 7.4e-26 120.9 145 50.3
TWI60G0712 Tripterygium wilfordii HOM05D004041 ORTHO05D004564 9.7e-26 120.6 147 51.0
AUR62020692 Chenopodium quinoa HOM05D004041 ORTHO05D004564 1.3e-25 120.2 153 49.0
Ciclev10007432m.g Citrus clementina HOM05D004041 ORTHO05D004564 1.3e-25 120.2 142 52.1
Aqoxy7G02570 Aquilegia oxysepala HOM05D004041 ORTHO05D004564 1.6e-25 119.8 145 48.3
AUR62028033 Chenopodium quinoa HOM05D004041 ORTHO05D004564 1.6e-25 119.8 153 47.7
AT3G49601 Arabidopsis thaliana HOM05D004041 ORTHO05D004564 2.2e-25 119.4 144 53.5
CiPaw.07G050600 Carya illinoinensis HOM05D004041 ORTHO05D004564 2.2e-25 119.4 145 51.0
Sp5g12500 Schrenkiella parvula HOM05D004041 ORTHO05D004564 2.2e-25 119.4 144 52.8
BcaC07g39425 Brassica carinata HOM05D004041 ORTHO05D004564 2.8e-25 119.0 150 50.0
A06p18110 Brassica napus HOM05D004041 ORTHO05D004564 2.8e-25 119.0 145 51.7
C08p24610 Brassica napus HOM05D004041 ORTHO05D004564 2.8e-25 119.0 150 50.0
BolC8t50077H Brassica oleracea HOM05D004041 ORTHO05D004564 2.8e-25 119.0 150 50.0
BraA06t24900Z Brassica rapa HOM05D004041 ORTHO05D004564 2.8e-25 119.0 145 51.7
MBI11_g09070_MAGBIO Magnolia biondii HOM05D004041 ORTHO05D004564 3.7e-25 118.6 145 48.3
Aa31LG4G18100 Aethionema arabicum HOM05D004041 ORTHO05D004564 4.8e-25 118.2 145 52.4
EL10Ac2g03659 Beta vulgaris HOM05D004041 ORTHO05D004564 4.8e-25 118.2 147 50.3
BcaB01g00690 Brassica carinata HOM05D004041 ORTHO05D004564 4.8e-25 118.2 143 51.7
Eucgr.H02470 Eucalyptus grandis HOM05D004041 ORTHO05D004564 4.8e-25 118.2 146 50.7
Gorai.010G210300 Gossypium raimondii HOM05D004041 ORTHO05D004564 8.2e-25 117.5 148 48.0
Thecc.10G127600 Theobroma cacao HOM05D004041 ORTHO05D004564 8.2e-25 117.5 148 48.0
Gohir.D06G179700 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.1e-24 117.1 148 47.3
Gohir.A06G171600 Gossypium hirsutum HOM05D004041 ORTHO05D004564 1.4e-24 116.7 148 48.0
ATR0665G601 Amborella trichopoda HOM05D004041 ORTHO05D004564 1.8e-24 116.3 144 49.3
AagrBONN_evm.TU.Sc2ySwM_344.5195 Anthoceros agrestis HOM05D004041 ORTHO05D004564 1.8e-24 116.3 142 47.9
Nn5g27656 Nelumbo nucifera HOM05D004041 ORTHO05D004564 3.1e-24 115.5 99 60.6
Glyma.11G174282 Glycine max HOM05D004041 ORTHO05D004564 4.1e-24 115.2 103 64.1
Lj8C415T2 Lonicera japonica HOM05D004041 ORTHO05D004564 4.1e-24 115.2 103 62.1
Nitab4.5_0000648g0040 Nicotiana tabacum HOM05D004041 ORTHO05D004564 4.1e-24 115.2 136 54.4
QL12p024601 Quercus lobata HOM05D004041 ORTHO05D004564 4.1e-24 115.2 154 47.4
Duzib106G1246 Durio zibethinus HOM05D004041 ORTHO05D004564 5.3e-24 114.8 148 46.6
Duzib128G1534 Durio zibethinus HOM05D004041 ORTHO05D004564 5.3e-24 114.8 147 47.6
CDE07G1163 Ceratophyllum demersum HOM05D004041 ORTHO05D004564 9.0e-24 114.0 141 50.4
Thecc.10G128300 Theobroma cacao HOM05D004041 ORTHO05D004564 1.2e-23 113.6 146 48.6
Cpa.g.sc117.15 Carica papaya HOM05D004041 ORTHO05D004564 1.5e-23 113.2 103 63.1
Thecc.10G128100 Theobroma cacao HOM05D004041 ORTHO05D004564 2.0e-23 112.8 145 47.6
COL.COLO4_09287 Corchorus olitorius HOM05D004041 ORTHO05D004564 2.6e-23 112.5 148 50.0
Ah.10g033610 Amaranthus hybridus HOM05D004041 ORTHO05D004564 3.4e-23 112.1 147 48.3
CSS0020148 Camellia sinensis var. sinensis HOM05D004041 ORTHO05D004564 4.5e-23 111.7 106 57.5
vmacro00640 Vaccinium macrocarpon HOM05D004041 ORTHO05D004564 4.5e-23 111.7 103 61.2
Gohir.D06G179400 Gossypium hirsutum HOM05D004041 ORTHO05D004564 7.6e-23 110.9 148 48.0
TPR.G10377 Trifolium pratense HOM05D004041 ORTHO05D004564 7.6e-23 110.9 105 61.0
FAN20G2913 Fragaria x ananassa HOM05D004041 ORTHO05D004564 1.3e-22 110.2 144 47.2
Medtr1g010100 Medicago truncatula HOM05D004041 ORTHO05D004564 1.3e-22 110.2 105 60.0
RcHm_v2.0_Chr6g0312381 Rosa chinensis HOM05D004041 ORTHO05D004564 1.7e-22 109.8 145 45.5
THA.LOC109116738 Tarenaya hassleriana HOM05D004041 ORTHO05D004564 1.7e-22 109.8 104 58.7
Gorai.010G210000 Gossypium raimondii HOM05D004041 ORTHO05D004564 2.9e-22 109.0 148 48.0
FAN15G2764 Fragaria x ananassa HOM05D004041 ORTHO05D004564 8.5e-22 107.5 144 45.1
FAN27G0182 Fragaria x ananassa HOM05D004041 ORTHO05D004564 8.5e-22 107.5 144 45.1
TPR.G20436 Trifolium pratense HOM05D004041 ORTHO05D004564 8.5e-22 107.5 105 59.0
SEGI_30814 Sequoiadendron giganteum HOM05D004041 ORTHO05D004564 1.9e-21 106.3 136 47.1
FvH4_2g30620 Fragaria vesca HOM05D004041 ORTHO05D004564 2.5e-21 105.9 144 44.4
FAN24G0669 Fragaria x ananassa HOM05D004041 ORTHO05D004564 2.5e-21 105.9 144 44.4
CBR_g88579 Chara braunii HOM05D004041 ORTHO05D004564 3.2e-21 105.5 139 47.5
Zm00001eb344480 Zea mays HOM05D004041 ORTHO05D004564 9.4e-21 104.0 154 42.9
Pp3c3_10000 Physcomitrium patens HOM05D004041 ORTHO05D004564 1.6e-20 103.2 142 42.3
Mapoly0057s0059 Marchantia polymorpha HOM05D004041 ORTHO05D004564 3.6e-20 102.1 140 42.1
TAR626G0117 Trochodendron aralioides HOM05D002987 ORTHO05D003359 6.7e-19 97.8 92 57.6
Carub.0005s1594 Capsella rubella HOM05D004041 ORTHO05D004564 1.5e-18 96.7 96 61.5
Nn8g41252 Nelumbo nucifera HOM05D004041 ORTHO05D004564 1.9e-18 96.3 78 62.8
SalBow7G2142 Salvia bowleyana HOM05D004041 ORTHO05D004564 2.5e-18 95.9 99 53.5
Zm00001eb204710 Zea mays HOM05D004041 ORTHO05D004564 3.3e-18 95.5 161 39.8
ATR0665G238 Amborella trichopoda HOM05D004041 ORTHO05D004564 2.2e-17 92.8 101 53.5
Zm00001eb204800 Zea mays HOM05D004041 ORTHO05D004564 2.2e-17 92.8 106 50.0
BcaC09g49964 Brassica carinata HOM05D004041 ORTHO05D004564 2.8e-17 92.4 126 50.0
Rhsim07G0241300 Rhododendron simsii HOM05D004041 ORTHO05D004564 3.7e-17 92.0 96 53.1
C01p30700 Brassica napus HOM05D004041 ORTHO05D004564 6.3e-17 91.3 129 48.8
Cpa.g.c48129 Carica papaya HOM05D004041 ORTHO05D004564 6.3e-17 91.3 81 65.4
Dinv37476 Davidia involucrata HOM05D000079 ORTHO05D000211 6.3e-17 91.3 87 58.6
Dinv09449 Davidia involucrata HOM05D003985 ORTHO05D005253 8.2e-17 90.9 95 55.8
Ca_11409_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 1.1e-16 90.5 107 53.3
RcHm_v2.0_Chr4g0410401 Rosa chinensis HOM05D004041 ORTHO05D004564 1.1e-16 90.5 90 53.3
Zm00001eb204820 Zea mays HOM05D004041 ORTHO05D004564 1.8e-16 89.7 102 51.0
Zm00001eb204790 Zea mays HOM05D004041 ORTHO05D004564 4.1e-16 88.6 102 50.0
Ca_11411_v3 Cicer arietinum L. HOM05D004041 ORTHO05D004564 9.1e-16 87.4 106 50.9
Zm00001eb204730 Zea mays HOM05D004041 ORTHO05D004564 9.1e-16 87.4 105 49.5
Zm00001eb204750 Zea mays HOM05D004041 ORTHO05D004564 1.2e-15 87.0 101 51.5
TPR.G211 Trifolium pratense HOM05D004041 ORTHO05D004564 2.0e-15 86.3 92 56.5
Zm00001eb204770 Zea mays HOM05D004041 ORTHO05D004564 2.0e-15 86.3 104 51.0
Zm00001eb204830 Zea mays HOM05D004041 ORTHO05D004564 2.6e-15 85.9 101 49.5
Gohir.A06G171302 Gossypium hirsutum HOM05D004041 ORTHO05D004564 4.5e-15 85.1 128 43.0
Zm00001eb204810 Zea mays HOM05D004041 ORTHO05D004564 4.5e-15 85.1 101 50.5
Ah.11g044190 Amaranthus hybridus HOM05D004041 ORTHO05D004564 5.9e-15 84.7 121 44.6
RhsimUnG0236200 Rhododendron simsii HOM05D004041 ORTHO05D004564 7.7e-15 84.3 90 53.3
Zm00001eb357810 Zea mays HOM05D004041 ORTHO05D004564 1.0e-14 84.0 85 51.8
CANSAT21G2467 Cannabis sativa HOM05D004041 ORTHO05D004564 1.3e-14 83.6 124 46.0
Mapoly0057s0051 Marchantia polymorpha HOM05D004041 ORTHO05D004564 6.5e-14 81.3 94 48.9
Gohir.D06G179300 Gossypium hirsutum HOM05D004041 ORTHO05D004564 7.2e-13 77.8 96 47.9
Cre09.g409200 Chlamydomonas reinhardtii HOM05D004041 ORTHO05D004564 1.6e-12 76.6 133 40.6
MCO09G628 Micromonas commoda HOM05D004041 ORTHO05D004564 1.4e-11 73.6 137 40.1
PRCOL_00006922 Prasinoderma coloniale HOM05D004041 ORTHO05D004564 1.8e-11 73.2 102 43.1
Manes.07G111004 Manihot esculenta HOM05D004041 ORTHO05D004564 5.1e-11 71.6 90 44.4
Zm00001eb204760 Zea mays HOM05D004041 ORTHO05D004564 1.5e-10 70.1 90 48.9
TPR.G10966 Trifolium pratense HOM05D004041 ORTHO05D004564 2.0e-10 69.7 50 70.0
Gorai.010G209300 Gossypium raimondii HOM05D004041 ORTHO05D004564 2.6e-10 69.3 92 44.6
Mapoly0018s0007 Marchantia polymorpha HOM05D004041 ORTHO05D004564 4.4e-10 68.6 91 40.7
Dinv19111 Davidia involucrata HOM05D004041 ORTHO05D004564 2.8e-09 65.9 61 62.3
BolC3t18797H Brassica oleracea HOM05D004041 ORTHO05D004564 4.1e-08 62.0 78 53.8
Gorai.010G211700 Gossypium raimondii HOM05D004041 ORTHO05D004564 9.1e-08 60.8 45 64.4
Cfa024514 Carpinus fangiana HOM05D004041 ORTHO05D004564 4.5e-07 58.5 139 34.5
Gorai.010G209900 Gossypium raimondii HOM05D004041 ORTHO05D004564 5.9e-07 58.2 96 42.7
SGA_v2.0_scaffold7G03771 Striga asiatica HOM05D004041 ORTHO05D004564 2.2e-06 56.2 67 52.2


User provided reference genes

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