Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 8.6e-146 520.4 280 100.0
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 7.1e-100 367.9 193 99.5
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 3.2e-60 236.1 191 68.6
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 2.7e-59 233.0 182 68.1
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 1.3e-56 224.2 182 65.4
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.4e-55 220.7 182 65.9
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.4e-55 219.9 179 65.9
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 9.1e-55 218.0 180 65.6
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 1.6e-54 217.2 180 65.6
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.7e-54 216.5 178 64.6
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 1.3e-53 214.2 186 64.0
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 5.0e-53 212.2 183 63.9
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.5e-52 210.7 180 64.4
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 7.2e-52 208.4 183 61.2
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 4.7e-51 205.7 179 63.1
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.0e-50 204.5 183 61.7
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 1.8e-50 203.8 179 62.6
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 2.3e-50 203.4 180 61.1
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 4.0e-50 202.6 190 60.0
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.6e-49 199.9 184 60.9
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 5.7e-49 198.7 175 62.9
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 9.8e-49 198.0 183 57.4
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 2.9e-48 196.4 183 58.5
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 4.9e-48 195.7 183 59.6
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.8e-47 193.7 192 56.8
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 3.2e-47 193.0 184 58.7
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 4.1e-47 192.6 183 56.8
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.2e-46 191.0 192 56.2
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.6e-46 190.7 174 58.0
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 5.9e-46 188.7 183 57.9
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 5.9e-46 188.7 193 57.5
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.3e-45 187.6 183 55.7
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 5.0e-45 185.7 181 58.0
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 5.0e-45 185.7 173 59.0
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 6.6e-45 185.3 222 52.3
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.6e-45 185.3 222 52.3
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.5e-44 184.1 187 56.1
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 1.9e-44 183.7 181 56.4
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 3.3e-44 183.0 181 56.4
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 4.3e-44 182.6 180 52.8
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.3e-44 181.8 186 57.5
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.2e-43 181.0 183 53.6
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.6e-43 180.6 186 58.1
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 4.7e-43 179.1 183 55.7
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 6.1e-43 178.7 178 58.4
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.8e-42 177.2 183 53.0
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 6.8e-42 175.3 183 54.1
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 6.8e-42 175.3 186 59.7
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.2e-41 174.5 182 53.8
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 2.6e-41 173.3 183 56.3
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 2.6e-41 173.3 184 57.1
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.3e-40 171.0 177 52.0
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 2.2e-40 170.2 181 54.7
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 3.7e-40 169.5 183 51.9
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.1e-39 167.9 173 54.3
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.9e-39 167.2 183 50.3
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.9e-39 167.2 192 52.6
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.4e-39 166.8 184 52.7
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.4e-39 166.8 183 52.5
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 4.1e-39 166.0 168 54.2
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 7.0e-39 165.2 173 53.2
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 7.0e-39 165.2 173 53.2
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.2e-39 164.9 178 52.2
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 9.2e-39 164.9 182 53.8
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 1.6e-38 164.1 177 55.9
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.6e-38 164.1 193 52.8
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 2.7e-38 163.3 182 52.7
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 2.7e-38 163.3 181 53.6
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.5e-38 162.9 181 53.6
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 7.8e-38 161.8 183 50.3
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 5.0e-37 159.1 177 52.0
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 5.0e-37 159.1 178 51.7
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 6.6e-37 158.7 185 50.3
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 6.6e-37 158.7 177 54.8
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 6.6e-37 158.7 180 48.9
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.6e-37 158.3 182 50.5
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 8.6e-37 158.3 183 49.7
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.9e-36 157.1 174 51.7
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 5.6e-36 155.6 178 51.1
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 5.6e-36 155.6 178 51.1
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 5.6e-36 155.6 180 52.8
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 7.3e-36 155.2 183 50.8
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 9.5e-36 154.8 183 51.4
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.1e-35 153.7 179 48.6
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.8e-35 153.3 174 54.0
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 4.7e-35 152.5 174 50.6
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 6.2e-35 152.1 178 50.0
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 8.1e-35 151.8 182 47.3
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.1e-34 151.4 180 52.2
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 1.4e-34 151.0 182 46.7
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.4e-34 151.0 183 48.6
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.8e-34 150.6 171 49.1
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 2.3e-34 150.2 179 53.1
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.3e-34 150.2 178 47.8
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 5.2e-34 149.1 176 52.8
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 8.9e-34 148.3 182 47.8
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.5e-33 147.5 178 49.4
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.6e-33 146.7 174 50.6
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 4.4e-33 146.0 172 50.0
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 5.8e-33 145.6 176 48.3
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.2e-32 143.7 174 52.9
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.9e-32 143.3 179 46.4
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 2.9e-32 143.3 176 53.4
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 4.9e-32 142.5 182 44.5
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 8.3e-32 141.7 182 44.5
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 8.3e-32 141.7 182 44.5
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 8.3e-32 141.7 178 48.9
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 1.1e-31 141.4 182 44.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 1.4e-31 141.0 175 48.6
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 9.2e-31 138.3 117 58.1
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 1.2e-30 137.9 188 42.6
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 2.7e-30 136.7 188 42.0
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 7.8e-30 135.2 157 50.3
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 1.7e-29 134.0 187 40.6
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 1.7e-29 134.0 187 40.6
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 3.9e-29 132.9 179 48.0
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 8.6e-29 131.7 186 40.9
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 8.6e-29 131.7 186 40.9
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 8.6e-29 131.7 179 40.2
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.1e-28 131.3 183 44.3
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 3.3e-28 129.8 183 41.5
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 3.3e-28 129.8 183 45.9
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 4.3e-28 129.4 185 45.4
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 5.6e-28 129.0 183 44.8
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 7.3e-28 128.6 181 41.4
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 9.5e-28 128.3 111 58.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.2e-27 127.9 182 41.8
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 1.2e-25 121.3 187 43.9
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 3.2e-23 113.2 117 60.7
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 1.7e-16 90.9 196 30.6
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.1e-11 73.9 176 34.7
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 7.6e-09 65.5 86 39.5
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.7e-08 64.3 174 32.8


User provided reference genes

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