Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 6.9e-140 500.7 274 100.0
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 7.0e-92 341.3 280 66.4
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 3.1e-79 299.3 268 60.1
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 4.4e-78 295.4 273 57.5
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.2e-70 270.8 267 55.8
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 3.4e-70 269.2 269 55.0
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 4.4e-70 268.9 267 58.4
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 5.8e-70 268.5 274 55.5
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 7.5e-70 268.1 269 56.5
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 1.3e-69 267.3 268 56.0
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 1.7e-69 266.9 269 54.6
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 3.7e-69 265.8 269 52.4
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 4.9e-69 265.4 254 59.1
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 6.4e-69 265.0 280 56.8
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 8.3e-69 264.6 269 54.3
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 1.6e-67 260.4 272 53.3
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 4.6e-67 258.8 274 51.5
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 2.1e-64 250.0 273 51.3
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 1.4e-63 247.3 270 49.3
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 1.5e-62 243.8 234 55.1
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 3.4e-62 242.7 269 49.8
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 2.9e-61 239.6 281 48.4
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 4.9e-61 238.8 264 48.9
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 4.9e-61 238.8 261 50.2
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 6.4e-61 238.4 228 56.1
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.1e-60 237.7 252 50.0
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 7.1e-60 235.0 268 53.7
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 1.2e-59 234.2 227 55.9
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 1.6e-59 233.8 266 48.9
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 4.6e-59 232.3 213 58.2
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 1.0e-58 231.1 263 52.1
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 3.0e-58 229.6 255 49.0
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 6.6e-58 228.4 212 53.3
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 8.6e-58 228.0 249 48.2
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 1.5e-57 227.3 269 50.9
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.9e-57 226.9 249 48.2
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 3.3e-57 226.1 268 47.8
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 4.3e-57 225.7 252 49.6
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 5.6e-57 225.3 249 48.2
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 7.3e-57 224.9 261 47.1
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 9.6e-57 224.6 268 47.8
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 9.6e-57 224.6 222 55.0
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 6.2e-56 221.9 303 42.9
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 1.4e-55 220.7 279 47.7
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 5.2e-55 218.8 278 43.9
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 2.0e-54 216.9 263 47.9
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 2.0e-54 216.9 272 45.6
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 1.7e-53 213.8 268 47.4
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 2.2e-53 213.4 258 52.3
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 2.2e-53 213.4 258 52.3
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 2.2e-53 213.4 271 43.5
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 2.2e-53 213.4 268 45.5
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 2.4e-52 209.9 271 44.3
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 3.2e-52 209.5 275 46.5
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 9.3e-52 208.0 277 45.5
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.6e-51 207.2 212 50.0
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 2.1e-51 206.8 275 45.8
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 2.1e-51 206.8 275 46.2
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 2.7e-51 206.5 275 46.2
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 2.7e-51 206.5 287 43.6
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 3.5e-51 206.1 276 46.4
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 3.5e-51 206.1 274 45.3
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 4.6e-51 205.7 278 42.4
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 1.7e-50 203.8 275 45.5
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 1.7e-50 203.8 271 45.4
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 2.3e-50 203.4 277 45.1
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 1.1e-49 201.1 280 47.1
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 3.3e-49 199.5 264 46.2
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 4.3e-49 199.1 282 42.2
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 4.3e-49 199.1 277 44.0
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 5.6e-49 198.7 202 52.5
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 2.8e-48 196.4 277 43.7
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 8.1e-48 194.9 262 44.7
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 2.2e-45 186.8 257 43.6
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 4.2e-44 182.6 269 42.4
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 5.4e-44 182.2 237 42.2
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 5.4e-44 182.2 242 41.7
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 2.7e-35 153.3 272 36.8
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 1.5e-33 147.5 243 44.0
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 1.7e-29 134.0 263 36.5
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 1.4e-28 131.0 250 37.6
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 1.1e-25 121.3 261 33.7
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 4.3e-25 119.4 108 53.7
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 4.5e-22 109.4 135 48.1
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 2.9e-21 106.7 128 52.3
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 1.8e-18 97.4 250 32.0
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 3.9e-18 96.3 111 47.7
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 9.7e-17 91.7 266 29.7
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 3.7e-16 89.7 262 29.0
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 2.4e-15 87.0 64 68.8
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 6.9e-15 85.5 241 28.6
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 1.5e-14 84.3 267 28.1
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 1.5e-14 84.3 253 30.0
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 1.5e-14 84.3 105 45.7
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 3.4e-14 83.2 252 29.8
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 7.7e-14 82.0 250 28.0
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 7.7e-14 82.0 250 28.0
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 7.7e-14 82.0 252 29.8
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 6.5e-13 79.0 59 66.1
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 1.9e-12 77.4 50 64.0
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 1.9e-12 77.4 246 27.6
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 2.5e-12 77.0 246 27.2
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 2.5e-12 77.0 247 24.7
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 3.2e-12 76.6 246 26.8
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 5.5e-12 75.9 246 26.8
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 5.5e-12 75.9 60 73.3
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 7.2e-12 75.5 246 26.8
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 7.2e-12 75.5 252 28.6
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 9.4e-12 75.1 250 28.4
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 1.0e-10 71.6 252 28.6
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 1.4e-10 71.2 246 26.8
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 3.3e-09 66.6 254 27.2
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 6.3e-08 62.4 65 49.2
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 6.3e-08 62.4 56 51.8
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 4.1e-07 59.7 72 44.4
TPR.G18947 Trifolium pratense HOM05D006860 ORTHO05D009547 5.3e-07 59.3 89 41.6
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 2.0e-06 57.4 40 72.5
SGA_v2.0_scaffold7G03921 Striga asiatica HOM05D002020 ORTHO05D002046 3.4e-06 56.6 49 63.3
RcHm_v2.0_Chr2g0123401 Rosa chinensis HOM05D000828 ORTHO05D000623 4.5e-06 56.2 61 47.5


User provided reference genes

Program Settings