Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00762 Erythranthe guttata HOM05D007026 ORTHO05D008493 3.0e-94 348.6 186 100.0
Migut.N01474 Erythranthe guttata HOM05D007026 ORTHO05D008493 3.3e-69 265.4 142 99.3
SGA_v2.0_scaffold4G02258 Striga asiatica HOM05D007026 ORTHO05D008493 1.4e-62 243.4 198 71.2
MSTRG.28077 Avicennia marina HOM05D007026 ORTHO05D008493 1.8e-62 243.0 163 79.1
Cc02_g27730 Coffea canephora HOM05D007026 ORTHO05D008493 1.5e-58 229.9 174 72.4
Hma1.2p1_0293F.1_g116330 Hydrangea macrophylla HOM05D007026 ORTHO05D008493 2.5e-56 222.6 185 67.6
DCAR_029660 Daucus carota HOM05D007026 ORTHO05D008493 2.1e-55 219.5 144 77.1
unitig_0.g1578 Utricularia gibba HOM05D007026 ORTHO05D008493 1.0e-54 217.2 144 76.4
Thecc.01G412700 Theobroma cacao HOM05D007026 ORTHO05D008493 1.4e-54 216.9 138 79.0
CSS0028033 Camellia sinensis var. sinensis HOM05D007026 ORTHO05D008493 7.4e-53 211.1 150 73.3
MD07G1007900 Malus domestica HOM05D007026 ORTHO05D008493 3.7e-52 208.8 144 74.3
Cpa.g.sc245.8 Carica papaya HOM05D007026 ORTHO05D008493 8.2e-52 207.6 144 75.0
MD02G1314200 Malus domestica HOM05D007026 ORTHO05D008493 1.8e-51 206.5 144 73.6
Prupe.2G010600 Prunus persica HOM05D007026 ORTHO05D008493 1.8e-51 206.5 172 65.7
Lj3g0000564 Lotus japonicus HOM05D007026 ORTHO05D008493 2.4e-51 206.1 144 74.3
Rhsim01G0130400 Rhododendron simsii HOM05D007026 ORTHO05D008493 3.1e-51 205.7 192 60.9
PGR044G0728 Punica granatum HOM05D007026 ORTHO05D008493 4.1e-51 205.3 144 72.9
vmacro21182 Vaccinium macrocarpon HOM05D007026 ORTHO05D008493 4.1e-51 205.3 168 66.7
Potri.009G063700 Populus trichocarpa HOM05D007026 ORTHO05D008493 5.3e-51 204.9 167 67.1
TWI09G0295 Tripterygium wilfordii HOM05D007026 ORTHO05D008493 7.0e-51 204.5 169 66.3
Sabra09G0047000 Salix brachista HOM05D007026 ORTHO05D008493 9.1e-51 204.1 164 67.7
Cfa010744 Carpinus fangiana HOM05D007026 ORTHO05D008493 2.0e-50 203.0 175 62.3
PGSC0003DMG400024551 Solanum tuberosum HOM05D007026 ORTHO05D008493 2.0e-50 203.0 150 70.7
QL04p005492 Quercus lobata HOM05D007026 ORTHO05D008493 3.5e-50 202.2 164 65.2
Lalb_Chr03g0033971 Lupinus albus HOM05D007026 ORTHO05D008493 4.5e-50 201.8 137 74.5
Psat4g148320 Pisum sativum HOM05D007026 ORTHO05D008493 4.5e-50 201.8 151 68.2
Medtr8g036520 Medicago truncatula HOM05D007026 ORTHO05D008493 7.7e-50 201.1 151 68.9
Sopen03g034460 Solanum pennellii HOM05D007026 ORTHO05D008493 7.7e-50 201.1 150 69.3
Atru.chr11.2644 Acer truncatum HOM05D007026 ORTHO05D008493 1.0e-49 200.7 150 70.0
CsaV3_7G031200 Cucumis sativus L. HOM05D007026 ORTHO05D008493 1.3e-49 200.3 184 59.2
Solyc03g115460.3 Solanum lycopersicum HOM05D007026 ORTHO05D008493 1.7e-49 199.9 150 68.7
Manes.10G145400 Manihot esculenta HOM05D007026 ORTHO05D008493 2.9e-49 199.1 163 65.0
RcHm_v2.0_Chr1g0315651 Rosa chinensis HOM05D007026 ORTHO05D008493 2.9e-49 199.1 164 65.9
MELO3C023538.2 Cucumis melo HOM05D007026 ORTHO05D008493 3.8e-49 198.7 184 59.8
Gohir.D08G166400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 6.5e-49 198.0 180 62.8
Gorai.004G173800 Gossypium raimondii HOM05D007026 ORTHO05D008493 6.5e-49 198.0 180 62.8
Lsat_1_v5_gn_1_108360 Lactuca sativa HOM05D007026 ORTHO05D008493 6.5e-49 198.0 175 62.3
Actinidia21558 Actinidia chinensis HOM05D007026 ORTHO05D008493 8.5e-49 197.6 137 73.0
Duzib268G1513 Durio zibethinus HOM05D007026 ORTHO05D008493 8.5e-49 197.6 138 72.5
Nitab4.5_0002881g0080 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.9e-48 196.4 165 64.8
FAN03G2284 Fragaria x ananassa HOM05D007026 ORTHO05D008493 3.2e-48 195.7 143 69.9
Nn2g15423 Nelumbo nucifera HOM05D007026 ORTHO05D008493 4.2e-48 195.3 173 61.8
THA.LOC104826673 Tarenaya hassleriana HOM05D007026 ORTHO05D008493 5.5e-48 194.9 151 66.9
ClCG09G004280 Citrullus lanatus HOM05D007026 ORTHO05D008493 7.2e-48 194.5 184 58.2
FAN06G1399 Fragaria x ananassa HOM05D007026 ORTHO05D008493 7.2e-48 194.5 143 70.6
arahy.Tifrunner.gnm1.ann1.VL74DI Arachis hypogaea HOM05D007026 ORTHO05D008493 9.4e-48 194.1 185 58.9
CANSAT80G1756 Cannabis sativa HOM05D007026 ORTHO05D008493 9.4e-48 194.1 179 56.4
ECA248G3415 Erigeron canadensis HOM05D007026 ORTHO05D008493 9.4e-48 194.1 178 60.1
Peaxi162Scf00428g00077 Petunia axillaris HOM05D007026 ORTHO05D008493 9.4e-48 194.1 167 63.5
TAR623G0027 Trochodendron aralioides HOM05D007026 ORTHO05D008493 2.1e-47 193.0 171 61.4
FAN10G3680 Fragaria x ananassa HOM05D007026 ORTHO05D008493 6.1e-47 191.4 143 69.9
TAR623G1735 Trochodendron aralioides HOM05D007026 ORTHO05D008493 6.1e-47 191.4 170 61.2
Ciclev10032288m.g Citrus clementina HOM05D007026 ORTHO05D008493 2.3e-46 189.5 187 59.4
Lj7P569T60 Lonicera japonica HOM05D007026 ORTHO05D008493 2.3e-46 189.5 144 65.3
Potri.001G269000 Populus trichocarpa HOM05D007026 ORTHO05D008493 2.3e-46 189.5 178 60.1
Haze_03229 Corylus avellana HOM05D007026 ORTHO05D008493 5.2e-46 188.3 157 65.6
Sc11g0009270 Simmondsia chinensis HOM05D007026 ORTHO05D008493 5.2e-46 188.3 144 66.0
Glyma.13G204000 Glycine max HOM05D007026 ORTHO05D008493 1.5e-45 186.8 178 59.6
HanXRQChr06g0185391 Helianthus annuus HOM05D007026 ORTHO05D008493 5.7e-45 184.9 177 59.3
Sed0012425 Sechium edule HOM05D007026 ORTHO05D008493 1.4e-43 180.3 144 67.4
VMungo1127G0427 Vigna mungo HOM05D007026 ORTHO05D008493 3.1e-43 179.1 179 56.4
Phvul.011G212500 Phaseolus vulgaris HOM05D007026 ORTHO05D008493 2.6e-42 176.0 186 56.5
Aqoxy1G00217 Aquilegia oxysepala HOM05D007026 ORTHO05D008493 5.9e-42 174.9 173 54.9
PSO339G4493 Papaver somniferum HOM05D007026 ORTHO05D008493 5.0e-41 171.8 183 52.5
SHI26926 Sapria himalayana HOM05D007026 ORTHO05D008493 1.1e-40 170.6 150 62.0
C03p45790 Brassica napus HOM05D007026 ORTHO05D008493 1.9e-40 169.9 176 55.1
BcaC01g04025 Brassica carinata HOM05D007026 ORTHO05D008493 2.5e-40 169.5 176 55.1
BolC3t16854H Brassica oleracea HOM05D007026 ORTHO05D008493 2.5e-40 169.5 176 55.1
MBI01_g27619_MAGBIO Magnolia biondii HOM05D007026 ORTHO05D008493 4.2e-40 168.7 171 53.2
Carub.0003s1200 Capsella rubella HOM05D007026 ORTHO05D008493 9.4e-40 167.5 172 55.2
AT3G12650 Arabidopsis thaliana HOM05D007026 ORTHO05D008493 2.1e-39 166.4 171 55.6
BcaB04g18713 Brassica carinata HOM05D007026 ORTHO05D008493 2.1e-39 166.4 148 59.5
A03p37740 Brassica napus HOM05D007026 ORTHO05D008493 2.1e-39 166.4 176 53.4
BraA03t12929Z Brassica rapa HOM05D007026 ORTHO05D008493 2.1e-39 166.4 176 53.4
ATR0605G064 Amborella trichopoda HOM05D007026 ORTHO05D008493 2.7e-39 166.0 171 55.0
Nitab4.5_0005198g0030 Nicotiana tabacum HOM05D007026 ORTHO05D008493 2.7e-39 166.0 137 65.7
Sp3g10790 Schrenkiella parvula HOM05D007026 ORTHO05D008493 2.7e-39 166.0 139 64.0
CARHR087160 Cardamine hirsuta HOM05D007026 ORTHO05D008493 4.7e-39 165.2 152 57.9
AL3G24320 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 8.0e-39 164.5 172 55.2
Thhalv10021417m.g Eutrema salsugineum HOM05D007026 ORTHO05D008493 8.0e-39 164.5 180 53.3
RcHm_v2.0_Chr1g0315191 Rosa chinensis HOM05D007026 ORTHO05D008493 3.0e-38 162.5 117 70.9
RcHm_v2.0_Chr1g0315371 Rosa chinensis HOM05D007026 ORTHO05D008493 8.8e-38 161.0 117 70.1
COL.COLO4_23920 Corchorus olitorius HOM05D007026 ORTHO05D008493 1.5e-37 160.2 171 53.8
HPP92_022795 Vanilla planifolia HOM05D007026 ORTHO05D008493 2.0e-37 159.8 151 58.9
RcHm_v2.0_Chr1g0315521 Rosa chinensis HOM05D007026 ORTHO05D008493 2.6e-37 159.5 117 70.1
A05p36850 Brassica napus HOM05D007026 ORTHO05D008493 5.7e-37 158.3 174 55.2
BraA05t22486Z Brassica rapa HOM05D007026 ORTHO05D008493 3.7e-36 155.6 174 54.0
Aa31LG3G20 Aethionema arabicum HOM05D007026 ORTHO05D008493 4.8e-36 155.2 157 55.4
Dinv09365 Davidia involucrata HOM05D007026 ORTHO05D008493 8.3e-36 154.5 137 62.8
RcHm_v2.0_Chr1g0315011 Rosa chinensis HOM05D007026 ORTHO05D008493 8.3e-36 154.5 117 69.2
BcaB06g25527 Brassica carinata HOM05D007026 ORTHO05D008493 1.1e-35 154.1 151 56.3
Dinv43456 Davidia involucrata HOM05D007026 ORTHO05D008493 1.1e-35 154.1 142 62.7
Actinidia20675 Actinidia chinensis HOM05D007026 ORTHO05D008493 3.6e-31 139.0 136 56.6
Eucgr.J01262 Eucalyptus grandis HOM05D007026 ORTHO05D008493 3.6e-31 139.0 117 59.8
FvH4_7g00860 Fragaria vesca HOM05D007026 ORTHO05D008493 4.7e-31 138.7 98 73.5
Gohir.A08G145400 Gossypium hirsutum HOM05D007026 ORTHO05D008493 4.7e-31 138.7 152 53.3
EL10Ac2g04312 Beta vulgaris HOM05D007026 ORTHO05D008493 3.4e-29 132.5 176 44.9
BcaC05g29251 Brassica carinata HOM05D007026 ORTHO05D008493 7.5e-29 131.3 151 53.0
PSO384G4663 Papaver somniferum HOM05D007026 ORTHO05D008493 1.4e-27 127.1 139 52.5
BolC5t34196H Brassica oleracea HOM05D007026 ORTHO05D008493 1.8e-27 126.7 113 61.1
Os02g0718000 Oryza sativa ssp. japonica HOM05D007026 ORTHO05D008493 5.0e-25 118.6 151 47.0
Zm00001eb189290 Zea mays HOM05D007026 ORTHO05D008493 1.1e-24 117.5 183 41.5
BcaB08g35591 Brassica carinata HOM05D007026 ORTHO05D008493 3.0e-22 109.4 140 50.7
AUR62009374 Chenopodium quinoa HOM05D007026 ORTHO05D008493 1.8e-19 100.1 118 43.2
Nitab4.5_0004511g0060 Nicotiana tabacum HOM05D007026 ORTHO05D008493 1.8e-19 100.1 68 73.5
Pp3c2_10070 Physcomitrium patens HOM05D007026 ORTHO05D008493 2.5e-16 89.7 171 37.4
Nitab4.5_0000052g0150 Nicotiana tabacum HOM05D007026 ORTHO05D008493 3.6e-15 85.9 86 60.5
AL7G43500 Arabidopsis lyrata HOM05D007026 ORTHO05D008493 2.3e-14 83.2 71 60.6
TPR.G17515 Trifolium pratense HOM05D007026 ORTHO05D008493 2.0e-13 80.1 168 36.9
SMO147G0317 Selaginella moellendorffii HOM05D007026 ORTHO05D008493 3.7e-12 75.9 112 38.4
C05p55310 Brassica napus HOM05D007026 ORTHO05D008493 1.2e-10 70.9 49 75.5
Aqoxy1G00218 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 1.6e-10 70.5 131 35.9
Mapoly0153s0019 Marchantia polymorpha HOM05D007026 ORTHO05D008493 2.0e-10 70.1 134 37.3
TPR.G28471 Trifolium pratense HOM05D007026 ORTHO05D008493 8.0e-07 58.2 39 74.4


User provided reference genes

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