Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.4e-110 402.9 199 100.0
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 1.8e-60 236.5 207 62.8
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 5.7e-59 231.5 202 64.9
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 1.4e-54 216.9 201 61.2
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 4.2e-54 215.3 154 70.8
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 1.2e-53 213.8 193 64.2
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 3.6e-53 212.2 133 78.2
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 1.0e-52 210.7 138 76.1
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 1.0e-52 210.7 199 60.8
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 1.0e-52 210.7 199 60.8
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 2.3e-52 209.5 143 75.5
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 6.7e-52 208.0 163 68.7
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 1.1e-51 207.2 145 75.2
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.1e-51 207.2 139 77.0
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 1.1e-51 207.2 167 68.3
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 1.5e-51 206.8 154 72.1
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 1.5e-51 206.8 144 76.4
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 1.5e-51 206.8 166 68.1
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 2.6e-51 206.1 144 75.7
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 2.6e-51 206.1 167 66.5
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 3.3e-51 205.7 177 65.5
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 3.3e-51 205.7 135 76.3
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 4.4e-51 205.3 134 78.4
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 4.4e-51 205.3 142 73.9
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 5.7e-51 204.9 144 76.4
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 7.4e-51 204.5 159 68.6
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 7.4e-51 204.5 136 77.2
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 9.7e-51 204.1 130 77.7
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.3e-50 203.8 143 72.7
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 1.3e-50 203.8 168 66.1
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 1.3e-50 203.8 135 75.6
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.3e-50 203.8 139 77.7
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 1.7e-50 203.4 133 77.4
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 1.7e-50 203.4 130 80.8
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 2.8e-50 202.6 188 59.0
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 2.8e-50 202.6 156 69.2
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 3.7e-50 202.2 142 75.4
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 3.7e-50 202.2 156 67.9
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 3.7e-50 202.2 133 75.9
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 4.8e-50 201.8 113 89.4
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 4.8e-50 201.8 135 75.6
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 4.8e-50 201.8 156 68.6
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 6.3e-50 201.4 159 69.8
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 6.3e-50 201.4 127 79.5
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 1.1e-49 200.7 124 82.3
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 1.4e-49 200.3 193 56.5
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 1.4e-49 200.3 190 61.1
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 1.4e-49 200.3 156 67.9
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 2.4e-49 199.5 116 85.3
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 2.4e-49 199.5 124 82.3
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 3.1e-49 199.1 169 65.7
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 3.1e-49 199.1 143 71.3
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 4.1e-49 198.7 145 72.4
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 5.3e-49 198.4 135 73.3
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 9.1e-49 197.6 133 72.2
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 9.1e-49 197.6 195 57.4
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.2e-48 197.2 136 74.3
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.2e-48 197.2 137 73.0
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 1.2e-48 197.2 135 75.6
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 2.6e-48 196.1 166 67.5
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 4.5e-48 195.3 137 75.2
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 4.5e-48 195.3 136 72.8
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 5.9e-48 194.9 128 76.6
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 1.3e-47 193.7 130 75.4
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 5.0e-47 191.8 167 65.3
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.1e-46 190.7 121 77.7
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 3.2e-46 189.1 139 69.8
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 1.2e-45 187.2 150 66.7
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 1.6e-45 186.8 105 85.7
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 2.7e-45 186.0 108 82.4
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 3.6e-45 185.7 122 75.4
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 4.7e-45 185.3 168 60.1
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 4.7e-45 185.3 136 69.1
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 6.1e-45 184.9 161 60.2
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 8.0e-45 184.5 158 64.6
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 1.0e-44 184.1 152 67.1
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.8e-44 183.3 124 77.4
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 1.8e-44 183.3 157 63.1
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 2.3e-44 183.0 134 71.6
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 2.3e-44 183.0 126 74.6
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.0e-44 182.2 132 73.5
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 4.0e-44 182.2 146 69.2
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 4.0e-44 182.2 170 62.4
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 5.2e-44 181.8 132 73.5
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 6.7e-44 181.4 130 73.1
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 8.8e-44 181.0 170 58.8
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 8.8e-44 181.0 130 73.1
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.5e-43 180.3 139 69.8
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 2.6e-43 179.5 124 76.6
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 2.6e-43 179.5 124 76.6
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 2.6e-43 179.5 132 72.7
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 4.4e-43 178.7 113 81.4
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 5.7e-43 178.3 124 73.4
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 9.7e-43 177.6 155 62.6
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.7e-42 176.8 146 67.8
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.8e-42 176.0 179 58.1
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 3.7e-42 175.6 121 75.2
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 8.2e-42 174.5 141 66.7
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 2.4e-41 172.9 121 72.7
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 5.3e-41 171.8 121 71.9
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 5.3e-41 171.8 122 73.0
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 2.1e-37 159.8 212 46.7
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 4.7e-37 158.7 130 60.8
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 5.2e-36 155.2 193 50.8
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 5.2e-36 155.2 144 63.9
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 3.7e-34 149.1 118 68.6
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 4.1e-33 145.6 88 84.1
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 1.2e-27 127.5 130 58.5
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 1.2e-27 127.5 79 82.3
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 3.4e-27 125.9 74 83.8
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.1e-25 120.9 80 76.2
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 4.1e-25 119.0 98 70.4
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 5.4e-25 118.6 90 66.7
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 1.2e-24 117.5 80 75.0
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.0e-23 114.4 66 84.8
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 1.7e-23 113.6 86 68.6
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 2.3e-23 113.2 84 67.9
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 8.6e-23 111.3 62 83.9
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 3.3e-22 109.4 203 39.9
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 1.0e-20 104.4 67 77.6
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 7.5e-19 98.2 94 57.4
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 1.6e-16 90.5 72 61.1
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.6e-16 90.5 106 48.1
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.0e-16 90.1 147 42.2
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 5.9e-16 88.6 55 78.2
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 1.7e-15 87.0 127 48.0
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 3.9e-15 85.9 125 43.2
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 7.3e-14 81.6 64 70.3
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 3.4e-11 72.8 72 58.3
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 7.8e-08 61.6 86 43.0
MCO14G438 Micromonas commoda HOM05D006501 ORTHO05D008241 7.3e-06 55.1 82 42.7


User provided reference genes

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