Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 2.3e-115 419.1 241 100.0
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 5.0e-94 348.2 241 73.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.5e-93 346.7 241 73.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.6e-92 343.2 241 71.0
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 1.2e-87 327.0 190 81.6
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 1.6e-87 326.6 190 80.5
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 3.5e-87 325.5 190 80.5
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 3.0e-86 322.4 190 80.5
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 1.1e-85 320.5 190 78.9
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 1.1e-85 320.5 190 81.1
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 2.5e-85 319.3 192 79.7
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.5e-85 319.3 190 79.5
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 7.3e-85 317.8 190 76.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 7.3e-85 317.8 190 80.0
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 9.5e-85 317.4 190 78.4
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 9.5e-85 317.4 190 77.9
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.8e-84 315.8 190 78.9
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 2.8e-84 315.8 190 76.8
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.6e-84 315.5 190 75.8
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 3.6e-84 315.5 240 65.4
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 3.6e-84 315.5 190 78.9
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 4.7e-84 315.1 274 61.3
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 6.2e-84 314.7 189 77.2
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 1.1e-83 313.9 190 76.8
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 1.1e-83 313.9 190 78.4
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 2.3e-83 312.8 189 79.9
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 2.3e-83 312.8 190 77.4
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 3.1e-83 312.4 190 77.4
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 4.0e-83 312.0 190 75.3
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 5.2e-83 311.6 189 77.8
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 5.2e-83 311.6 190 76.3
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 5.2e-83 311.6 190 78.4
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 8.9e-83 310.8 190 78.4
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.2e-82 310.5 190 76.8
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.5e-82 310.1 190 77.4
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 2.0e-82 309.7 190 76.3
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 9.9e-82 307.4 189 77.8
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.3e-81 307.0 190 75.8
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 1.7e-81 306.6 190 73.2
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 2.2e-81 306.2 190 72.6
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 6.4e-81 304.7 190 74.2
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 6.4e-81 304.7 190 73.7
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 1.9e-80 303.1 190 74.7
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 3.2e-80 302.4 191 76.4
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 4.1e-80 302.0 186 76.3
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 5.4e-80 301.6 190 78.9
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.2e-79 300.4 269 60.2
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 1.6e-79 300.1 189 75.1
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 2.1e-79 299.7 190 75.8
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 2.7e-79 299.3 186 73.1
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 2.7e-79 299.3 190 74.2
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 4.6e-79 298.5 190 74.2
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 7.8e-79 297.7 190 71.6
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 1.7e-78 296.6 195 73.3
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.7e-78 296.6 241 64.3
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 6.6e-78 294.7 190 74.2
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 8.6e-78 294.3 190 71.1
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 1.9e-77 293.1 190 69.5
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 2.5e-77 292.7 190 70.0
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 4.3e-77 292.0 190 70.5
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 4.3e-77 292.0 190 70.5
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 5.6e-77 291.6 189 69.8
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 5.6e-77 291.6 190 72.1
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 5.6e-77 291.6 172 80.8
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.2e-76 290.4 190 72.1
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 2.8e-76 289.3 189 71.4
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 6.2e-76 288.1 191 71.2
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 8.1e-76 287.7 189 70.9
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 8.1e-76 287.7 187 72.2
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 1.1e-75 287.3 190 71.1
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 1.1e-75 287.3 189 70.4
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 1.8e-75 286.6 190 69.5
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 3.1e-75 285.8 205 69.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 6.8e-75 284.6 190 69.5
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 6.8e-75 284.6 189 70.9
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 1.2e-74 283.9 190 68.4
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 1.2e-74 283.9 190 67.9
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 1.5e-74 283.5 191 69.6
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 4.4e-74 282.0 208 64.9
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 7.6e-74 281.2 191 69.6
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.3e-73 280.4 189 69.8
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 8.4e-73 277.7 190 69.5
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.9e-72 276.6 191 68.1
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 2.4e-72 276.2 190 67.4
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 7.1e-72 274.6 169 77.5
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 1.6e-71 273.5 190 68.4
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 1.6e-71 273.5 189 68.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 1.0e-70 270.8 189 66.7
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.5e-69 266.2 190 67.4
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 4.3e-69 265.4 187 66.8
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 1.8e-67 260.0 202 62.4
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 2.0e-66 256.5 190 63.7
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 2.0e-66 256.5 166 76.5
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 7.6e-66 254.6 166 75.9
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 7.1e-64 248.1 191 61.8
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 6.0e-63 245.0 148 79.1
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 1.5e-61 240.4 189 61.4
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 1.5e-61 240.4 172 66.3
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.2e-55 220.7 135 72.6
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.7e-55 219.5 132 76.5
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 6.0e-55 218.4 190 55.3
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 3.8e-49 199.1 111 83.8
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 4.2e-48 195.7 135 66.7
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 5.5e-48 195.3 170 61.2
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 1.9e-45 186.8 114 77.2
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 6.9e-43 178.3 109 72.5
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.9e-40 170.2 104 78.8
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 6.3e-36 155.2 100 74.0
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.9e-35 151.8 87 79.3
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 1.2e-34 151.0 138 57.2
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.7e-29 132.1 79 82.3
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 7.4e-29 131.7 91 69.2
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.4e-27 126.7 84 69.0
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 1.2e-26 124.4 141 47.5
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 2.2e-25 120.2 79 74.7
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 1.4e-24 117.5 70 75.7
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 5.5e-24 115.5 104 59.6
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 5.5e-24 115.5 88 61.4
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.1e-23 113.6 79 65.8
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 1.8e-22 110.5 73 74.0
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 5.3e-19 99.0 65 66.2
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 5.5e-16 89.0 59 71.2
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 1.2e-13 81.3 59 69.5
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 4.8e-12 75.9 51 72.5


User provided reference genes

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