Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 9.9e-277 956.4 588 100.0
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 4.6e-181 638.6 588 70.1
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.1e-161 574.3 558 68.5
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 1.7e-159 567.0 611 66.9
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.1e-146 523.5 615 62.3
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 3.1e-145 519.6 577 64.8
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.6e-141 507.3 589 58.2
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.5e-139 500.0 572 63.8
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.2e-136 491.1 596 52.5
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.4e-134 484.2 581 58.3
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.6e-133 480.7 576 62.3
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 4.6e-133 479.2 577 61.5
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.1e-131 474.6 574 60.8
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 6.2e-130 468.8 611 55.6
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 8.2e-130 468.4 574 55.9
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 9.0e-129 464.9 580 60.9
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 1.0e-127 461.5 581 61.4
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.2e-126 456.4 601 44.3
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 5.5e-126 455.7 580 59.8
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 9.3e-126 454.9 581 61.3
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 3.5e-125 453.0 595 46.4
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.6e-125 452.6 610 48.9
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 6.1e-125 452.2 579 60.3
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 3.9e-124 449.5 584 58.4
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 5.1e-124 449.1 603 50.1
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 7.4e-123 445.3 581 54.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 8.2e-122 441.8 578 55.9
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.8e-121 440.7 577 57.9
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 3.1e-121 439.9 584 56.5
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 2.6e-120 436.8 609 56.5
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 5.9e-120 435.6 600 48.0
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.3e-119 434.5 608 51.0
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 2.2e-119 433.7 599 58.6
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 2.9e-119 433.3 584 56.7
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 3.8e-119 433.0 573 59.0
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 6.5e-119 432.2 578 57.3
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 3.2e-118 429.9 577 58.2
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 6.1e-117 425.6 576 58.5
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 3.9e-116 422.9 574 57.8
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 3.3e-115 419.9 571 57.6
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 2.2e-114 417.2 571 50.8
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 2.2e-114 417.2 571 56.9
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 6.3e-114 415.6 578 57.8
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.8e-113 414.1 579 46.5
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 4.1e-113 412.9 618 51.5
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 2.6e-112 410.2 573 53.8
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.8e-111 406.4 551 57.4
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.1e-110 404.8 606 46.4
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 3.2e-110 403.3 573 48.3
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 3.6e-109 399.8 579 48.9
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.5e-107 394.4 581 55.2
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.6e-107 393.7 574 53.1
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 5.7e-107 392.5 576 54.0
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 2.2e-106 390.6 592 53.9
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 4.8e-106 389.4 603 54.2
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 1.1e-105 388.3 579 49.4
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 1.4e-105 387.9 575 54.3
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 5.3e-105 386.0 518 55.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 6.5e-103 379.0 502 55.8
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 8.5e-103 378.6 581 54.2
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 2.1e-101 374.0 615 47.0
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 6.1e-101 372.5 478 62.1
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 3.0e-100 370.2 578 54.3
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 3.0e-100 370.2 578 54.3
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.1e-97 361.7 518 57.5
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.2e-96 358.2 576 51.4
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 4.5e-96 356.3 519 52.8
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 5.9e-96 355.9 577 53.4
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.7e-95 354.4 590 52.2
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 6.5e-95 352.4 577 51.6
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 6.5e-95 352.4 577 51.6
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 5.5e-94 349.4 358 60.6
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.1e-93 347.4 584 51.5
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 8.0e-93 345.5 577 51.3
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 4.4e-91 339.7 498 55.6
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 9.8e-91 338.6 584 51.0
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 1.4e-89 334.7 571 50.6
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.1e-89 333.6 577 50.8
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 1.8e-84 317.8 608 41.6
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 4.0e-84 316.6 386 53.6
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 8.8e-84 315.5 575 48.9
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.5e-83 314.7 582 47.3
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 2.4e-81 307.4 548 43.8
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 1.3e-79 301.6 582 47.9
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 1.5e-78 298.1 572 42.8
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 3.0e-76 290.4 605 31.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.2e-75 288.5 583 40.3
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.2e-75 288.5 583 40.3
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 2.0e-72 277.7 550 51.1
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 3.5e-72 276.9 468 55.6
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 8.6e-71 272.3 578 47.6
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.5e-70 271.6 574 41.1
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 4.3e-70 270.0 518 46.7
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 3.6e-69 266.9 578 41.9
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 2.3e-68 264.2 573 46.4
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.0e-67 261.2 571 45.9
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 6.4e-66 256.1 577 46.1
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 1.9e-65 254.6 576 46.2
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 1.6e-64 251.5 575 45.4
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 5.0e-63 246.5 366 55.2
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.9e-62 244.6 524 48.5
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 7.8e-56 222.6 496 40.9
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 3.0e-55 220.7 579 44.9
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 3.9e-47 193.7 461 50.5
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.4e-36 157.9 313 34.5
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 5.1e-31 140.2 157 51.0
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 2.4e-28 131.3 209 49.3
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.4e-25 122.1 157 47.1
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.7e-18 98.6 184 55.4
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 7.4e-14 83.2 173 33.5
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 3.4e-11 74.3 193 30.1
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.6e-08 65.5 433 31.2
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 2.7e-08 64.7 52 61.5
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 7.9e-08 63.2 52 59.6
HanXRQChr09g0272151 Helianthus annuus HOM05D006572 ORTHO05D008181 3.9e-07 60.8 51 60.8
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 5.1e-07 60.5 43 62.8


User provided reference genes

Program Settings