Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 0.0e+00 1102.0 573 100.0
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 3.6e-207 725.3 559 70.3
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.0e-206 721.8 574 69.0
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 3.4e-205 718.8 526 73.2
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 5.8e-205 718.0 516 75.0
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 9.8e-205 717.2 538 71.2
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 8.3e-204 714.1 555 69.7
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 8.3e-204 714.1 515 71.8
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 2.4e-203 712.6 503 74.2
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 4.1e-203 711.8 535 70.5
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 4.1e-203 711.8 535 70.5
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 4.6e-202 708.4 524 70.4
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 1.0e-201 707.2 543 68.9
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 6.6e-201 704.5 523 70.2
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.5e-200 703.4 523 70.2
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 1.5e-200 703.4 587 69.7
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.3e-200 701.8 554 69.5
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 4.3e-200 701.8 523 70.0
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 7.3e-200 701.0 574 67.6
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 2.8e-199 699.1 541 69.7
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 4.7e-199 698.4 552 68.3
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 6.2e-199 698.0 541 68.4
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 4.0e-198 695.3 520 70.0
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 5.2e-198 694.9 515 71.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 5.2e-198 694.9 560 67.9
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 1.5e-197 693.3 564 67.2
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 2.0e-197 693.0 570 66.5
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 2.6e-197 692.6 550 67.8
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 7.5e-197 691.0 598 64.4
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 2.9e-196 689.1 561 66.7
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 3.7e-196 688.7 539 67.3
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 6.4e-196 688.0 546 67.4
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 4.1e-195 685.3 591 64.6
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.1e-194 682.9 578 64.9
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 7.8e-194 681.0 490 74.5
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 5.1e-193 678.3 594 65.8
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 6.6e-193 677.9 573 63.4
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 9.5e-192 674.1 515 68.2
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.2e-191 673.7 563 64.8
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.4e-190 669.5 579 63.0
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 6.8e-190 667.9 574 62.4
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.2e-189 667.2 515 68.3
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 2.0e-189 666.4 570 64.7
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 4.4e-189 665.2 513 68.4
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 9.9e-189 664.1 513 68.2
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 2.9e-188 662.5 514 66.9
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 4.9e-188 661.8 499 69.3
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.4e-187 660.2 503 67.6
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.4e-187 660.2 513 68.0
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 1.9e-187 659.8 513 68.0
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 2.4e-187 659.4 512 68.0
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 9.2e-187 657.5 562 64.2
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.2e-186 657.1 500 67.8
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.6e-186 656.8 573 63.5
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 2.1e-186 656.4 577 61.9
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 6.0e-186 654.8 538 64.7
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 7.8e-186 654.4 500 67.4
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.3e-185 653.7 578 61.1
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 2.3e-185 652.9 521 66.4
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 8.7e-185 651.0 631 59.4
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 9.6e-184 647.5 530 64.0
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.8e-182 643.3 571 61.5
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.5e-181 640.2 527 66.0
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 3.4e-181 639.0 592 60.6
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 7.6e-181 637.9 491 66.8
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 2.2e-180 636.3 552 62.9
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 7.8e-178 627.9 489 69.7
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.7e-177 626.7 444 73.2
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 3.0e-177 625.9 552 61.1
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 5.1e-177 625.2 543 63.2
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.5e-176 622.9 498 66.9
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 2.5e-176 622.9 500 68.2
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 1.3e-175 620.5 520 66.2
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 5.3e-174 615.1 459 70.6
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 9.3e-171 604.4 545 60.6
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 6.0e-170 601.7 631 57.2
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.3e-169 599.7 592 60.3
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 1.5e-168 597.0 488 65.4
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 5.8e-165 585.1 565 58.4
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 7.6e-165 584.7 517 60.7
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 9.9e-165 584.3 525 59.0
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 6.7e-161 571.6 560 58.9
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 4.8e-159 565.5 565 55.6
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 1.1e-152 544.3 535 58.7
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 4.3e-152 542.3 420 67.4
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 7.4e-152 541.6 428 65.7
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 5.3e-150 535.4 551 57.0
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.1e-142 511.1 586 53.8
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 4.2e-139 499.2 530 54.3
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 1.1e-134 484.6 538 49.8
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 3.6e-130 469.5 495 51.3
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.5e-128 464.2 324 73.8
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 2.6e-125 453.4 324 70.7
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 2.6e-120 436.8 520 47.9
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.7e-116 424.1 394 56.1
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 2.7e-101 373.6 521 44.1
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.9e-83 314.3 232 73.3
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 7.1e-62 242.7 550 32.9
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.8e-57 228.0 199 57.8
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 1.3e-55 221.9 181 65.7
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 1.7e-55 221.5 198 57.1
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 2.5e-51 207.6 258 50.0
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 2.8e-50 204.1 239 53.1
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 3.1e-49 200.7 216 55.6
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.1e-46 192.2 210 50.0
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.8e-44 184.9 143 69.2
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 2.2e-34 151.4 172 51.7
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 9.0e-33 146.0 232 47.0
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.1e-29 134.8 117 62.4
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 5.1e-20 103.6 71 81.7
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.3e-18 96.7 64 76.6
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 5.9e-08 63.5 117 33.3
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 1.3e-07 62.4 117 32.5


User provided reference genes

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