Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 0.0e+00 1299.6 684 100.0
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 5.6e-199 698.4 717 56.9
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 2.2e-182 643.3 702 55.8
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 2.4e-149 533.5 716 49.0
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 4.4e-135 486.1 723 44.4
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 1.1e-120 438.3 727 41.5
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 2.9e-118 430.3 720 42.1
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 7.3e-114 415.6 726 42.1
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 5.2e-112 409.5 720 39.7
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 2.1e-108 397.5 723 38.9
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 1.0e-107 395.2 732 39.5
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 3.3e-106 390.2 753 39.0
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 4.3e-106 389.8 719 38.2
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 1.1e-104 385.2 909 34.8
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 4.0e-104 383.3 728 37.5
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.0e-103 380.9 713 41.1
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 9.9e-103 378.6 721 38.4
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 1.3e-102 378.3 725 37.7
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.3e-102 378.3 773 39.7
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 3.2e-101 373.6 723 37.8
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 3.0e-99 367.1 713 36.9
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 3.0e-99 367.1 733 39.8
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 3.0e-99 367.1 738 38.6
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 8.7e-99 365.5 700 38.1
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 2.5e-98 364.0 720 37.4
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 1.3e-97 361.7 713 36.3
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.6e-97 361.3 714 36.6
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 4.8e-97 359.8 718 38.9
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 8.1e-97 359.0 709 36.4
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 8.1e-97 359.0 747 39.0
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.8e-96 357.8 676 38.0
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 4.0e-96 356.7 701 37.5
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 2.6e-95 354.0 684 37.6
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.9e-94 350.5 679 37.6
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 3.8e-94 350.1 722 37.0
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 6.4e-94 349.4 728 35.2
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 6.4e-94 349.4 723 37.6
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 8.4e-94 349.0 747 36.8
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.4e-93 348.2 729 36.9
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 1.4e-93 348.2 747 35.6
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 3.2e-93 347.1 671 37.3
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 1.6e-92 344.7 710 36.6
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 3.5e-92 343.6 731 36.7
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 3.5e-92 343.6 712 35.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 3.5e-92 343.6 728 36.1
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 2.3e-91 340.9 885 33.4
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 8.1e-89 332.4 726 36.5
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 8.1e-89 332.4 726 36.5
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 2.4e-88 330.9 733 35.7
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 7.6e-87 325.9 514 41.1
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 7.6e-87 325.9 728 33.8
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 9.9e-87 325.5 703 35.1
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 1.4e-85 321.6 703 36.6
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 1.9e-85 321.2 667 37.5
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.2e-84 318.5 704 37.1
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 2.7e-84 317.4 682 38.6
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 2.3e-83 314.3 742 32.7
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 3.9e-83 313.5 716 34.6
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 1.9e-82 311.2 716 34.8
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 4.3e-82 310.1 709 34.8
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.3e-81 308.5 722 33.4
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 2.4e-80 304.3 707 34.5
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 2.4e-80 304.3 707 34.5
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 2.4e-80 304.3 707 34.5
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 2.6e-79 300.8 564 37.4
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 4.9e-78 296.6 727 33.0
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.5e-77 294.3 687 33.3
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 7.1e-77 292.7 720 33.8
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 7.9e-76 289.3 731 34.2
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 1.0e-75 288.9 659 35.1
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 1.3e-75 288.5 505 35.8
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 2.3e-75 287.7 652 33.3
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 2.3e-75 287.7 726 34.0
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 2.5e-74 284.3 338 48.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 3.7e-73 280.4 657 32.4
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 3.7e-73 280.4 718 33.1
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 3.1e-72 277.3 583 34.3
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 9.0e-72 275.8 507 38.5
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 3.4e-71 273.9 728 33.4
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 6.5e-70 269.6 778 31.9
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 1.9e-69 268.1 641 33.7
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 6.1e-68 263.1 277 50.5
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 3.0e-67 260.8 786 31.3
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 7.4e-66 256.1 287 48.4
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 1.6e-65 255.0 802 32.3
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 5.3e-64 250.0 503 33.8
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 7.7e-63 246.1 276 48.2
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.3e-57 228.8 701 30.2
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 8.8e-51 206.1 645 30.1
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 4.8e-49 200.3 379 40.9
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 5.9e-47 193.4 531 29.4
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 2.3e-43 181.4 228 44.7
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 7.2e-37 159.8 412 35.0
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.6e-36 158.7 340 40.0
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 4.7e-36 157.1 690 25.8
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 8.3e-33 146.4 152 50.7
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.8e-32 145.2 430 32.8
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 4.2e-29 134.0 155 49.0
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 8.8e-27 126.3 150 46.7
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.2e-25 121.7 151 45.0
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.8e-24 118.6 236 38.1
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 7.0e-24 116.7 135 47.4
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 2.8e-20 104.8 165 40.6
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 1.4e-19 102.4 292 30.1
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 2.7e-15 88.2 297 33.0
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 3.0e-14 84.7 159 45.3
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 1.1e-13 82.8 162 37.7
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 3.3e-13 81.3 332 28.0
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 5.6e-13 80.5 55 70.9
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 3.4e-10 71.2 495 22.2
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 4.4e-10 70.9 250 29.2
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 6.4e-09 67.0 98 40.8
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 5.4e-08 63.9 605 21.8
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.0e-07 62.0 189 37.0
SEGI_32981 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.3e-06 59.3 245 26.9


User provided reference genes

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