Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 2.3e-268 928.3 462 100.0
SalBow4G2871 Salvia bowleyana HOM05D007271 ORTHO05D009217 1.7e-186 656.4 547 63.3
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 5.2e-164 581.6 547 57.6
SalBow8G4630 Salvia bowleyana HOM05D007271 ORTHO05D009217 3.4e-155 552.4 536 55.0
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 2.2e-154 549.7 502 57.2
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 9.8e-147 524.2 500 56.0
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 3.6e-141 505.8 515 54.2
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 1.1e-140 504.2 502 54.0
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.3e-138 497.3 494 54.0
unitig_747.g21928 Utricularia gibba HOM05D007271 ORTHO05D009217 8.4e-138 494.6 529 53.1
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 2.4e-137 493.0 494 53.4
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 1.0e-135 487.6 500 51.2
Sopen08g024690 Solanum pennellii HOM05D007271 ORTHO05D009217 8.6e-135 484.6 499 52.1
Solyc08g076040.2 Solanum lycopersicum HOM05D007271 ORTHO05D009217 1.1e-134 484.2 499 52.1
PGSC0003DMG400035874 Solanum tuberosum HOM05D007271 ORTHO05D009217 3.6e-133 479.2 499 51.7
CAN.G773.8 Capsicum annuum HOM05D007271 ORTHO05D009217 6.9e-132 474.9 507 51.9
Peaxi162Scf00408g00227 Petunia axillaris HOM05D007271 ORTHO05D009217 1.3e-130 470.7 516 49.8
Lj8A323T49 Lonicera japonica HOM05D007271 ORTHO05D009217 2.2e-130 469.9 554 48.7
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 2.4e-129 466.5 511 49.7
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 7.1e-129 464.9 560 47.5
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 2.5e-126 456.4 494 49.6
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 2.8e-125 453.0 502 48.8
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 5.3e-124 448.7 494 48.8
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 1.5e-123 447.2 502 46.6
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 8.4e-122 441.4 535 46.2
CiPaw.12G070300 Carya illinoinensis HOM05D007271 ORTHO05D009217 1.3e-119 434.1 504 46.8
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 4.3e-118 429.1 518 45.6
Manes.17G011200 Manihot esculenta HOM05D007271 ORTHO05D009217 2.4e-116 423.3 509 45.6
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 1.5e-115 420.6 514 45.5
Eucgr.E01257 Eucalyptus grandis HOM05D007271 ORTHO05D009217 9.9e-115 417.9 495 45.9
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 2.2e-114 416.8 527 45.0
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 3.8e-114 416.0 508 45.1
Potri.001G133700 Populus trichocarpa HOM05D007271 ORTHO05D009217 2.4e-113 413.3 519 44.9
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 5.5e-113 412.1 492 43.5
ECA246G0509 Erigeron canadensis HOM05D007271 ORTHO05D009217 1.6e-112 410.6 430 50.7
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 3.5e-112 409.5 532 43.4
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 3.5e-112 409.5 514 44.6
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 6.0e-112 408.7 505 44.8
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.0e-111 407.9 514 44.4
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 1.3e-111 407.5 511 44.8
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 5.1e-111 405.6 514 44.4
TWI14G0446 Tripterygium wilfordii HOM05D007271 ORTHO05D009217 1.9e-110 403.7 498 43.8
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 5.6e-110 402.1 514 43.8
HanXRQChr17g0537681 Helianthus annuus HOM05D007271 ORTHO05D009217 7.4e-110 401.7 478 45.8
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 9.6e-110 401.4 514 44.0
Lsat_1_v5_gn_3_20940 Lactuca sativa HOM05D007271 ORTHO05D009217 3.7e-109 399.4 475 45.1
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 8.1e-109 398.3 506 43.9
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 9.0e-108 394.8 514 43.6
Atru.chr6.1575 Acer truncatum HOM05D007271 ORTHO05D009217 1.7e-106 390.6 504 43.5
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 6.5e-106 388.7 508 42.1
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.4e-105 387.5 525 42.9
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.9e-105 387.1 525 42.9
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.2e-104 384.4 529 42.0
Glyma.01G009700 Glycine max HOM05D007271 ORTHO05D009217 4.6e-104 382.5 504 44.6
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 6.0e-104 382.1 516 43.6
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 1.3e-103 380.9 527 42.1
VMungo1215G2496 Vigna mungo HOM05D007271 ORTHO05D009217 2.3e-103 380.2 513 44.1
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 3.9e-103 379.4 534 42.3
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.9e-103 379.4 527 42.1
Lalb_Chr05g0215551 Lupinus albus HOM05D007271 ORTHO05D009217 3.9e-103 379.4 497 43.9
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.8e-98 362.8 530 41.3
unitig_32.g10968 Utricularia gibba HOM05D007271 ORTHO05D009217 1.4e-97 360.9 328 59.5
Hma1.2p1_1486F.1_g286550 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 2.1e-96 357.1 474 43.9
Ca_25147_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 2.7e-96 356.7 510 41.6
Medtr5g027460 Medicago truncatula HOM05D007271 ORTHO05D009217 3.6e-96 356.3 513 42.3
ClCG10G001150 Citrullus lanatus HOM05D007271 ORTHO05D009217 7.9e-96 355.1 520 40.4
Psat2g139720 Pisum sativum HOM05D007271 ORTHO05D009217 3.3e-94 349.7 513 40.7
PGR031G3520 Punica granatum HOM05D007271 ORTHO05D009217 5.7e-94 349.0 510 39.4
MELO3C013807.2 Cucumis melo HOM05D007271 ORTHO05D009217 2.8e-93 346.7 520 39.8
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 2.8e-93 346.7 510 41.4
CsaV3_3G001170 Cucumis sativus L. HOM05D007271 ORTHO05D009217 3.1e-92 343.2 519 38.9
Lj4g0015364 Lotus japonicus HOM05D007271 ORTHO05D009217 3.1e-92 343.2 493 41.0
Nitab4.5_0000809g0020 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.3e-90 337.8 333 53.2
Glyma.16G103000 Glycine max HOM05D007271 ORTHO05D009217 6.1e-88 328.9 487 39.0
Medtr8g071050 Medicago truncatula HOM05D007271 ORTHO05D009217 1.2e-83 314.7 472 38.8
PSO717G0049 Papaver somniferum HOM05D007271 ORTHO05D009217 3.4e-83 313.2 513 38.2
arahy.Tifrunner.gnm1.ann1.3Y0Q41 Arachis hypogaea HOM05D007271 ORTHO05D009217 1.0e-82 311.6 481 38.3
Phvul.002G132600 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 1.3e-82 311.2 428 43.5
Psat4g109960 Pisum sativum HOM05D007271 ORTHO05D009217 2.9e-82 310.1 486 37.9
Phvul.003G273200 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 1.4e-81 307.8 474 37.3
VMungo0251G3497 Vigna mungo HOM05D007271 ORTHO05D009217 5.5e-81 305.8 506 35.2
TPR.G28964 Trifolium pratense HOM05D007271 ORTHO05D009217 4.7e-80 302.8 469 38.0
arahy.Tifrunner.gnm1.ann1.CI81A0 Arachis hypogaea HOM05D007271 ORTHO05D009217 3.0e-79 300.1 481 38.0
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 1.1e-78 298.1 531 37.7
QL12p000436 Quercus lobata HOM05D007271 ORTHO05D009217 2.4e-76 290.4 420 41.2
Os06g0113900 Oryza sativa ssp. japonica HOM05D007271 ORTHO05D009217 3.8e-74 283.1 474 37.3
Zm00001eb268890 Zea mays HOM05D007271 ORTHO05D009217 7.2e-73 278.9 490 35.1
Ciclev10003404m.g Citrus clementina HOM05D007271 ORTHO05D009217 7.0e-68 262.3 414 40.6
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.3e-66 258.1 338 42.0
ATR0829G091 Amborella trichopoda HOM05D007271 ORTHO05D009217 1.2e-56 224.9 403 36.0
HanXRQChr06g0172971 Helianthus annuus HOM05D007271 ORTHO05D009217 1.8e-55 221.1 180 58.9
SEGI_35026 Sequoiadendron giganteum HOM05D007271 ORTHO05D009217 4.3e-49 199.9 477 28.9
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 6.6e-42 176.0 185 49.7
Oeu061072.1 Olea europaea HOM05D007271 ORTHO05D009217 7.8e-27 125.9 98 66.3
Ca_22492_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 1.5e-22 111.7 108 47.2
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 2.3e-18 97.8 88 52.3
TPR.G9092 Trifolium pratense HOM05D007271 ORTHO05D009217 3.9e-18 97.1 102 53.9
HanXRQChr06g0172981 Helianthus annuus HOM05D007271 ORTHO05D009217 5.1e-18 96.7 120 45.8
QL12p000442 Quercus lobata HOM05D007271 ORTHO05D009217 4.3e-17 93.6 98 46.9
COL.COLO4_16884 Corchorus olitorius HOM05D007271 ORTHO05D009217 9.0e-15 85.9 106 46.2
TPR.G8637 Trifolium pratense HOM05D007271 ORTHO05D009217 8.4e-13 79.3 70 52.9
PSO675G5865 Papaver somniferum HOM05D007271 ORTHO05D009217 1.4e-12 78.6 112 42.0
arahy.Tifrunner.gnm1.ann1.RGNF9W Arachis hypogaea HOM05D007271 ORTHO05D009217 7.1e-12 76.3 102 41.2
arahy.Tifrunner.gnm1.ann1.WVYD0V Arachis hypogaea HOM05D007271 ORTHO05D009217 7.1e-12 76.3 102 41.2
ATR0829G132 Amborella trichopoda HOM05D007271 ORTHO05D009217 5.3e-07 60.1 75 40.0


User provided reference genes

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