Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 2.8e-67 258.5 129 100.0
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 6.8e-37 157.5 125 70.4
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 1.4e-34 149.8 122 68.0
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 1.8e-34 149.4 122 67.2
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 1.8e-29 132.9 121 57.9
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 2.0e-28 129.4 120 55.8
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 2.0e-28 129.4 126 55.6
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 3.4e-28 128.6 121 55.4
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 7.5e-28 127.5 111 57.7
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 9.8e-28 127.1 118 58.5
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 9.8e-28 127.1 116 56.9
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 4.9e-27 124.8 117 55.6
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 6.3e-27 124.4 117 58.1
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 8.3e-27 124.0 108 61.1
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 1.8e-26 122.9 112 57.1
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 2.4e-26 122.5 122 51.6
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 3.1e-26 122.1 121 53.7
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 4.1e-26 121.7 121 55.4
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 5.4e-26 121.3 117 53.8
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 1.2e-25 120.2 132 52.3
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 2.0e-25 119.4 104 55.8
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 4.5e-25 118.2 112 52.7
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 5.9e-25 117.9 125 55.2
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 5.9e-25 117.9 105 59.0
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 7.8e-25 117.5 122 49.2
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 7.8e-25 117.5 115 57.4
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.0e-24 117.1 102 58.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 1.3e-24 116.7 109 56.0
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 1.7e-24 116.3 122 51.6
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 2.3e-24 115.9 122 51.6
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 2.3e-24 115.9 101 62.4
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.9e-24 115.5 122 47.5
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 2.9e-24 115.5 122 53.3
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 3.8e-24 115.2 110 54.5
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 5.0e-24 114.8 120 53.3
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 8.6e-24 114.0 103 58.3
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 8.6e-24 114.0 123 53.7
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 8.6e-24 114.0 115 53.9
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 1.9e-23 112.8 124 50.0
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 1.9e-23 112.8 105 55.2
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.9e-23 112.8 105 55.2
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 2.5e-23 112.5 105 54.3
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 2.5e-23 112.5 121 52.9
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 3.3e-23 112.1 111 55.0
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 4.3e-23 111.7 89 65.2
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 5.6e-23 111.3 111 55.9
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 1.6e-22 109.8 105 58.1
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 1.6e-22 109.8 104 52.9
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 1.6e-22 109.8 102 56.9
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 1.6e-22 109.8 123 50.4
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 2.1e-22 109.4 128 47.7
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 2.1e-22 109.4 128 47.7
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 2.1e-22 109.4 128 47.7
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 2.8e-22 109.0 124 49.2
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 3.6e-22 108.6 128 47.7
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 3.6e-22 108.6 96 58.3
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 3.6e-22 108.6 108 50.9
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 4.7e-22 108.2 128 45.3
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 1.0e-21 107.1 128 46.9
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 1.0e-21 107.1 102 53.9
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 1.8e-21 106.3 127 47.2
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 2.3e-21 105.9 139 43.9
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 2.3e-21 105.9 116 49.1
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 2.3e-21 105.9 104 54.8
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 2.3e-21 105.9 103 54.4
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 3.0e-21 105.5 128 46.9
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 3.0e-21 105.5 128 46.9
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 4.0e-21 105.1 116 50.0
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 5.2e-21 104.8 116 50.9
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 5.2e-21 104.8 116 50.9
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 6.8e-21 104.4 128 45.3
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 8.9e-21 104.0 128 47.7
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 8.9e-21 104.0 128 46.1
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 1.2e-20 103.6 103 51.5
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 1.5e-20 103.2 113 52.2
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 1.5e-20 103.2 102 53.9
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 3.4e-20 102.1 103 43.7
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 5.7e-20 101.3 121 48.8
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 5.7e-20 101.3 129 45.0
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 7.5e-20 100.9 110 45.5
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 7.5e-20 100.9 104 51.0
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 9.8e-20 100.5 104 51.0
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 9.8e-20 100.5 104 51.0
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 1.3e-19 100.1 121 47.1
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 1.3e-19 100.1 111 48.6
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 1.7e-19 99.8 103 46.6
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 6.4e-19 97.8 114 47.4
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 8.3e-19 97.4 105 49.5
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 8.3e-19 97.4 111 47.7
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 8.3e-19 97.4 103 48.5
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 1.8e-18 96.3 109 48.6
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 1.8e-18 96.3 121 45.5
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 2.4e-18 95.9 117 47.0
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 2.4e-18 95.9 119 44.5
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 4.1e-18 95.1 101 53.5
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 1.2e-17 93.6 121 47.1
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 7.8e-17 90.9 87 55.2
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 1.0e-16 90.5 96 51.0
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 1.3e-16 90.1 103 44.7
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 1.5e-15 86.7 97 50.5
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 2.5e-15 85.9 129 43.4
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 2.5e-15 85.9 129 44.2
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 2.5e-15 85.9 129 42.6
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 5.6e-15 84.7 99 43.4
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 2.1e-14 82.8 99 45.5
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 8.0e-14 80.9 103 42.7
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.8e-13 79.7 56 62.5
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.5e-12 76.6 90 47.8
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.5e-12 76.6 90 47.8
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 1.7e-11 73.2 119 42.0
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 2.2e-11 72.8 56 62.5
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 4.9e-11 71.6 61 54.1
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.3e-08 63.5 97 40.2
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 5.0e-08 61.6 39 71.8
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 2.5e-07 59.3 39 69.2


User provided reference genes

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