Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 3.0e-148 528.5 265 100.0
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 3.4e-67 259.2 179 74.9
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 1.2e-64 250.8 198 63.1
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 7.8e-64 248.1 180 71.1
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.8e-60 236.9 144 81.2
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.8e-58 229.2 121 88.4
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 6.4e-58 228.4 154 74.0
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 8.4e-58 228.0 121 87.6
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 1.9e-57 226.9 121 87.6
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.4e-57 226.5 119 89.1
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 3.2e-57 226.1 143 76.9
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 6.0e-56 221.9 179 64.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.1e-55 218.8 145 75.2
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.1e-54 217.6 185 62.7
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 1.5e-54 217.2 125 80.8
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 1.5e-54 217.2 143 74.1
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 3.3e-54 216.1 180 63.3
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 3.3e-54 216.1 187 61.0
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 5.6e-54 215.3 129 77.5
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 9.6e-54 214.5 128 79.7
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 1.6e-53 213.8 129 76.7
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 1.6e-53 213.8 129 76.7
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 2.1e-53 213.4 118 82.2
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 2.8e-53 213.0 161 67.7
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 3.6e-53 212.6 139 73.4
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 3.6e-53 212.6 148 73.0
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 3.6e-53 212.6 145 72.4
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 3.6e-53 212.6 159 66.7
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 6.2e-53 211.8 119 82.4
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 6.2e-53 211.8 180 62.2
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 6.2e-53 211.8 147 69.4
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 6.2e-53 211.8 130 78.5
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 1.1e-52 211.1 119 80.7
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 1.1e-52 211.1 139 74.1
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 1.4e-52 210.7 115 85.2
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 1.4e-52 210.7 164 66.5
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 1.4e-52 210.7 183 62.3
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.8e-52 210.3 141 70.2
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 1.8e-52 210.3 138 71.7
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 1.8e-52 210.3 145 70.3
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 1.8e-52 210.3 152 67.1
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 2.4e-52 209.9 116 81.9
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 2.4e-52 209.9 116 82.8
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 2.4e-52 209.9 139 73.4
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 2.4e-52 209.9 129 76.7
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 3.1e-52 209.5 149 70.5
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 4.0e-52 209.1 165 66.1
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 4.0e-52 209.1 177 60.5
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 6.9e-52 208.4 187 60.4
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 6.9e-52 208.4 142 71.1
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 6.9e-52 208.4 145 70.3
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 9.0e-52 208.0 145 66.9
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 9.0e-52 208.0 173 60.7
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.2e-51 207.6 157 68.8
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 1.2e-51 207.6 118 80.5
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.2e-51 207.6 165 63.6
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 1.5e-51 207.2 170 60.6
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 1.5e-51 207.2 141 69.5
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 1.5e-51 207.2 143 70.6
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 1.5e-51 207.2 174 60.3
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 2.0e-51 206.8 140 71.4
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 2.6e-51 206.5 143 70.6
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 2.6e-51 206.5 167 64.1
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 3.4e-51 206.1 170 61.8
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 4.4e-51 205.7 170 61.8
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 4.4e-51 205.7 161 64.0
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 4.4e-51 205.7 182 60.4
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 5.8e-51 205.3 116 79.3
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 5.8e-51 205.3 156 64.7
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 7.6e-51 204.9 117 80.3
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 7.6e-51 204.9 147 68.7
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 9.9e-51 204.5 163 62.0
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 9.9e-51 204.5 137 70.1
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 1.3e-50 204.1 154 65.6
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.3e-50 204.1 145 67.6
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 1.7e-50 203.8 158 64.6
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 2.2e-50 203.4 116 78.4
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 2.2e-50 203.4 142 66.9
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 2.2e-50 203.4 155 63.9
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 2.2e-50 203.4 141 70.9
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.9e-50 203.0 176 60.2
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 1.1e-49 201.1 157 64.3
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 1.9e-49 200.3 148 67.6
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 2.4e-49 199.9 122 76.2
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 2.4e-49 199.9 205 57.6
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 3.2e-49 199.5 166 60.8
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 3.2e-49 199.5 166 60.8
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 7.1e-49 198.4 119 73.9
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 9.3e-49 198.0 152 67.8
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.2e-48 197.6 184 58.7
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.6e-48 197.2 144 67.4
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.1e-48 196.8 180 57.8
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 2.7e-48 196.4 164 61.0
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 4.6e-48 195.7 129 71.3
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 1.3e-47 194.1 167 58.7
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 1.7e-47 193.7 133 72.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 5.1e-47 192.2 116 73.3
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 1.9e-46 190.3 154 57.8
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 9.0e-44 181.4 123 65.9
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 2.2e-42 176.8 162 58.6
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 2.9e-42 176.4 123 70.7
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 6.0e-40 168.7 164 57.3
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 6.7e-39 165.2 165 51.5
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 4.3e-38 162.5 149 52.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 6.9e-36 155.2 160 51.9
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 2.0e-35 153.7 136 52.9
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 4.9e-34 149.1 119 57.1
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 2.2e-21 107.1 59 81.4
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 4.8e-21 105.9 93 60.2
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 6.3e-21 105.5 133 47.4
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.1e-20 104.8 71 67.6
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 1.8e-20 104.0 57 78.9
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 5.3e-20 102.4 57 77.2
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 4.5e-19 99.4 116 44.0
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 8.8e-15 85.1 78 52.6
Sp6g32770 Schrenkiella parvula HOM05D006706 ORTHO05D371381 6.3e-13 79.0 70 54.3
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 3.4e-11 73.2 77 54.5
unitig_32.g10946 Utricularia gibba HOM05D006706 ORTHO05D423226 2.2e-10 70.5 67 61.2


User provided reference genes

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