Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00397 Erythranthe guttata HOM05D007824 ORTHO05D009875 3.6e-21 104.0 52 100.0
Migut.E01438 Erythranthe guttata HOM05D007824 ORTHO05D009875 1.6e-16 88.6 52 80.8
Nitab4.5_0007473g0010 Nicotiana tabacum HOM05D007824 ORTHO05D009875 1.7e-15 85.1 52 82.7
PGSC0003DMG402026306 Solanum tuberosum HOM05D007824 ORTHO05D009875 5.0e-15 83.6 52 78.8
CSS0038513 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 6.5e-15 83.2 52 80.8
Solyc08g006580.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 6.5e-15 83.2 52 78.8
MD08G1050300 Malus domestica HOM05D007824 ORTHO05D009875 1.1e-14 82.4 54 77.8
Prupe.1G398400 Prunus persica HOM05D007824 ORTHO05D009875 1.1e-14 82.4 54 77.8
Oeu030057.1 Olea europaea HOM05D007824 ORTHO05D009875 3.2e-14 80.9 52 76.9
Ciclev10010135m.g Citrus clementina HOM05D007824 ORTHO05D009875 9.4e-14 79.3 52 76.9
MD15G1044500 Malus domestica HOM05D007824 ORTHO05D009875 2.1e-13 78.2 51 76.5
RcHm_v2.0_Chr6g0299081 Rosa chinensis HOM05D007824 ORTHO05D009875 6.1e-13 76.6 54 74.1
Potri.018G014101 Populus trichocarpa HOM05D007824 ORTHO05D009875 8.0e-13 76.3 43 83.7
ClCG05G016050 Citrullus lanatus HOM05D007824 ORTHO05D009875 2.3e-12 74.7 52 69.2
Sc23g0006310 Simmondsia chinensis HOM05D007824 ORTHO05D009875 3.0e-12 74.3 51 78.4
Thecc.09G011700 Theobroma cacao HOM05D007824 ORTHO05D009875 3.0e-12 74.3 45 80.0
unitig_46.g18221 Utricularia gibba HOM05D007824 ORTHO05D009875 3.0e-12 74.3 52 61.5
CiPaw.07G233700 Carya illinoinensis HOM05D007824 ORTHO05D009875 4.0e-12 73.9 53 75.5
Manes.03G006300 Manihot esculenta HOM05D007824 ORTHO05D009875 5.2e-12 73.6 43 83.7
CiPaw.08G004000 Carya illinoinensis HOM05D007824 ORTHO05D009875 6.8e-12 73.2 53 73.6
Oeu006856.1 Olea europaea HOM05D007824 ORTHO05D009875 8.8e-12 72.8 49 73.5
Duzib168G1878 Durio zibethinus HOM05D007824 ORTHO05D009875 1.2e-11 72.4 45 75.6
MELO3C016940.2 Cucumis melo HOM05D007824 ORTHO05D009875 2.0e-11 71.6 52 65.4
Gohir.A13G178900 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.6e-11 71.2 44 77.3
Gohir.D13G187000 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.6e-11 71.2 44 77.3
CSS0035617 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 73.1
Eucgr.C04026 Eucalyptus grandis HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 71.2
Sed0025799 Sechium edule HOM05D007824 ORTHO05D009875 3.4e-11 70.9 52 65.4
Sed0013399 Sechium edule HOM05D007824 ORTHO05D009875 4.4e-11 70.5 52 63.5
THA.LOC104803330 Tarenaya hassleriana HOM05D007824 ORTHO05D009875 4.4e-11 70.5 52 67.3
Sed0001567 Sechium edule HOM05D007824 ORTHO05D009875 5.7e-11 70.1 52 65.4
Aa31LG3G16350 Aethionema arabicum HOM05D007824 ORTHO05D009875 7.5e-11 69.7 48 68.8
ClCG08G013840 Citrullus lanatus HOM05D007824 ORTHO05D009875 7.5e-11 69.7 52 63.5
Nn5g27701 Nelumbo nucifera HOM05D007824 ORTHO05D009875 9.8e-11 69.3 52 69.2
Sed0025864 Sechium edule HOM05D007824 ORTHO05D009875 1.3e-10 68.9 52 65.4
CSS0008945 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.7e-10 68.6 52 69.2
CSS0021115 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 1.7e-10 68.6 52 69.2
CSS0041715 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 2.8e-10 67.8 51 70.6
Gohir.A05G062100 Gossypium hirsutum HOM05D007824 ORTHO05D009875 2.8e-10 67.8 44 70.5
CSS0044029 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.7e-10 67.4 52 69.2
Gohir.D05G064600 Gossypium hirsutum HOM05D007824 ORTHO05D009875 8.3e-10 66.2 44 68.2
Gorai.009G065300 Gossypium raimondii HOM05D007824 ORTHO05D009875 1.1e-09 65.9 44 68.2
CARHR202570 Cardamine hirsuta HOM05D007824 ORTHO05D009875 1.4e-09 65.5 48 64.6
Thhalv10015471m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 1.4e-09 65.5 48 64.6
Glyma.04G059451 Glycine max HOM05D007824 ORTHO05D009875 3.1e-09 64.3 53 64.2
Glyma.06G059900 Glycine max HOM05D007824 ORTHO05D009875 3.1e-09 64.3 53 64.2
Atru.chr7.2598 Acer truncatum HOM05D007824 ORTHO05D009875 9.1e-09 62.8 55 61.8
Lalb_Chr08g0244541 Lupinus albus HOM05D007824 ORTHO05D009875 1.2e-08 62.4 53 62.3
Phvul.009G085600 Phaseolus vulgaris HOM05D007824 ORTHO05D009875 1.2e-08 62.4 50 60.0
Zm00001eb221680 Zea mays HOM05D007824 ORTHO05D009875 1.2e-08 62.4 47 66.0
AL6G21300 Arabidopsis lyrata HOM05D007824 ORTHO05D009875 2.7e-08 61.2 50 64.0
Carub.0006s0922 Capsella rubella HOM05D007824 ORTHO05D009875 7.7e-08 59.7 46 67.4
Medtr1g013350 Medicago truncatula HOM05D007824 ORTHO05D009875 1.0e-07 59.3 47 66.0
AT5G10745 Arabidopsis thaliana HOM05D007824 ORTHO05D009875 1.3e-07 58.9 50 62.0
BcaB01g06276 Brassica carinata HOM05D007824 ORTHO05D009875 1.7e-07 58.5 50 60.0
Os10g0478900 Oryza sativa ssp. japonica HOM05D007824 ORTHO05D009875 2.2e-07 58.2 44 65.9
Medtr3g105765 Medicago truncatula HOM05D007824 ORTHO05D009875 2.9e-07 57.8 53 58.5
BcaB01g05502 Brassica carinata HOM05D007824 ORTHO05D009875 3.8e-07 57.4 46 65.2
A03p04740 Brassica napus HOM05D007824 ORTHO05D009875 3.8e-07 57.4 46 65.2
C03p05450 Brassica napus HOM05D007824 ORTHO05D009875 3.8e-07 57.4 46 65.2
BraA03t09814Z Brassica rapa HOM05D007824 ORTHO05D009875 3.8e-07 57.4 46 65.2
Thhalv10005256m.g Eutrema salsugineum HOM05D007824 ORTHO05D009875 6.5e-07 56.6 39 71.8
Glyma.17G221200 Glycine max HOM05D007824 ORTHO05D009875 8.5e-07 56.2 47 57.4
Glyma.14G104600 Glycine max HOM05D007824 ORTHO05D009875 1.1e-06 55.8 47 59.6
Solyc08g068930.3 Solanum lycopersicum HOM05D007824 ORTHO05D009875 1.5e-06 55.5 39 76.9
Aa31LG11G4150 Aethionema arabicum HOM05D007824 ORTHO05D009875 1.9e-06 55.1 36 72.2
arahy.Tifrunner.gnm1.ann1.58R7DF Arachis hypogaea HOM05D007824 ORTHO05D009875 1.9e-06 55.1 36 72.2
arahy.Tifrunner.gnm1.ann1.A82CWH Arachis hypogaea HOM05D007824 ORTHO05D009875 1.9e-06 55.1 36 72.2
Lj5g0022212 Lotus japonicus HOM05D007824 ORTHO05D009875 1.9e-06 55.1 50 56.0
CSS0018794 Camellia sinensis var. sinensis HOM05D007824 ORTHO05D009875 3.2e-06 54.3 36 77.8
SGA_v2.0_scaffold193G40685 Striga asiatica HOM05D005234 ORTHO05D006583 7.2e-06 53.1 38 76.3
TPR.G38894 Trifolium pratense HOM05D007824 ORTHO05D009875 7.2e-06 53.1 44 63.6
DCAR_000681 Daucus carota HOM05D007824 ORTHO05D009875 9.5e-06 52.8 40 72.5
Mapoly0056s0140 Marchantia polymorpha HOM05D007824 ORTHO05D009875 9.5e-06 52.8 39 66.7


User provided reference genes

Program Settings