Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00390 Erythranthe guttata HOM05D011191 ORTHO05D010786 3.2e-102 375.2 200 100.0
MSTRG.11791 Avicennia marina HOM05D011191 ORTHO05D010786 1.1e-28 131.0 207 45.9
SGA_v2.0_scaffold27G11628 Striga asiatica HOM05D011191 ORTHO05D010786 1.9e-25 120.2 173 43.9
SalBow4G0292 Salvia bowleyana HOM05D011191 ORTHO05D010786 2.8e-21 106.3 198 42.9
Oeu064523.1 Olea europaea HOM05D011191 ORTHO05D010786 1.1e-17 94.4 168 40.5
Peaxi162Scf01419g00119 Petunia axillaris HOM05D011191 ORTHO05D010786 3.5e-16 89.4 157 40.8
Nitab4.5_0012106g0010 Nicotiana tabacum HOM05D011191 ORTHO05D010786 5.1e-15 85.5 177 40.1
Cc08_g06710 Coffea canephora HOM05D011191 ORTHO05D010786 6.6e-15 85.1 88 56.8
Nitab4.5_0000406g0150 Nicotiana tabacum HOM05D011191 ORTHO05D010786 6.6e-15 85.1 176 40.3
PGSC0003DMG400014768 Solanum tuberosum HOM05D011191 ORTHO05D010786 1.6e-13 80.5 145 41.4
Sopen08g022570 Solanum pennellii HOM05D011191 ORTHO05D010786 4.0e-12 75.9 190 35.3
CAN.G273.25 Capsicum annuum HOM05D011191 ORTHO05D010786 2.0e-11 73.6 158 39.9
Nitab4.5_0002341g0020 Nicotiana tabacum HOM05D002702 ORTHO05D003416 2.6e-11 73.2 158 37.3
Gohir.A06G141400 Gossypium hirsutum HOM05D021816 ORTHO05D010786 4.4e-11 72.4 162 35.8
Hund20999 Selenicereus undatus HOM05D022334 ORTHO05D019466 9.9e-11 71.2 146 38.4
Solyc08g068840.3 Solanum lycopersicum HOM05D011191 ORTHO05D010786 2.9e-10 69.7 188 31.4
RcHm_v2.0_Chr5g0018721 Rosa chinensis HOM05D014033 ORTHO05D010786 3.8e-10 69.3 93 49.5
Thecc.06G134400 Theobroma cacao HOM05D021816 ORTHO05D010786 6.4e-10 68.6 143 35.0
FvH4_3g11660 Fragaria vesca HOM05D014033 ORTHO05D010786 8.4e-10 68.2 166 34.9
Nitab4.5_0000563g0080 Nicotiana tabacum HOM05D002702 ORTHO05D003416 8.4e-10 68.2 88 50.0
FAN16G2119 Fragaria x ananassa HOM05D014033 ORTHO05D010786 2.4e-09 66.6 133 40.6
FAN21G1527 Fragaria x ananassa HOM05D014033 ORTHO05D010786 3.2e-09 66.2 133 40.6
COL.COLO4_30908 Corchorus olitorius HOM05D021816 ORTHO05D010786 2.7e-08 63.2 196 32.1
Gohir.D11G170800 Gossypium hirsutum HOM05D002702 ORTHO05D003416 7.8e-08 61.6 222 29.7
Psat5g080560 Pisum sativum HOM05D002702 ORTHO05D003416 1.0e-07 61.2 87 43.7
Lalb_Chr02g0157421 Lupinus albus HOM05D002702 ORTHO05D003416 1.7e-07 60.5 103 39.8
Gorai.013G196300 Gossypium raimondii HOM05D002702 ORTHO05D003416 3.0e-07 59.7 220 30.0
Duzib192G0687 Durio zibethinus HOM05D021816 ORTHO05D010786 3.9e-07 59.3 168 31.5
Gohir.D13G166200 Gossypium hirsutum HOM05D002702 ORTHO05D003416 3.9e-07 59.3 238 29.0
Aa31LG6G2140 Aethionema arabicum HOM05D010419 ORTHO05D012558 5.1e-07 58.9 175 34.9
Gorai.007G182800 Gossypium raimondii HOM05D002702 ORTHO05D003416 6.6e-07 58.5 222 29.3
Gohir.A13G160900 Gossypium hirsutum HOM05D002702 ORTHO05D003416 1.1e-06 57.8 246 27.2
FAN27G3449 Fragaria x ananassa HOM05D024095 ORTHO05D010786 1.9e-06 57.0 224 28.6
PGR031G3358 Punica granatum HOM05D002702 ORTHO05D003416 2.5e-06 56.6 161 33.5
Haze_06436 Corylus avellana HOM05D002702 ORTHO05D003416 3.3e-06 56.2 74 45.9
FAN26G2334 Fragaria x ananassa HOM05D024095 ORTHO05D010786 3.3e-06 56.2 172 30.8
Lj4g0005434 Lotus japonicus HOM05D002702 ORTHO05D003416 3.3e-06 56.2 199 29.1
PGR042G0279 Punica granatum HOM05D002702 ORTHO05D003416 3.3e-06 56.2 69 46.4
Atru.chr2.1532 Acer truncatum HOM05D002702 ORTHO05D003416 4.3e-06 55.8 92 42.4
Potri.001G082800 Populus trichocarpa HOM05D011191 ORTHO05D010786 4.3e-06 55.8 149 34.9
Sc25g0001160 Simmondsia chinensis HOM05D002702 ORTHO05D003416 4.3e-06 55.8 66 48.5
CARHR226350 Cardamine hirsuta HOM05D010419 ORTHO05D012558 5.6e-06 55.5 179 30.2
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 5.6e-06 55.5 66 47.0
CAN.G756.30 Capsicum annuum HOM05D002702 ORTHO05D003416 9.6e-06 54.7 195 26.7


User provided reference genes

Program Settings