Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 4.6e-77 291.2 150 100.0
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 3.5e-61 238.4 150 81.3
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 6.0e-61 237.7 150 81.3
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 2.1e-53 212.6 150 74.0
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 1.6e-50 203.0 148 70.3
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 1.1e-49 200.3 149 66.4
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 3.1e-49 198.7 149 65.8
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 6.9e-49 197.6 149 65.1
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 9.0e-49 197.2 150 68.0
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.2e-48 196.8 150 67.3
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 1.2e-48 196.8 149 65.1
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 2.6e-48 195.7 148 64.9
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 5.8e-48 194.5 151 66.9
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.2e-47 192.6 151 65.6
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 2.9e-47 192.2 150 64.7
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 4.9e-47 191.4 142 66.2
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 6.4e-47 191.0 148 68.2
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 6.4e-47 191.0 144 66.0
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 1.4e-46 189.9 144 68.1
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 4.2e-46 188.3 148 66.9
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 7.1e-46 187.6 148 66.2
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 1.2e-45 186.8 147 63.9
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.6e-45 186.4 148 67.6
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.3e-44 183.3 148 65.5
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 3.0e-44 182.2 146 63.0
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 3.0e-44 182.2 146 63.7
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 3.9e-44 181.8 150 62.0
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 5.1e-44 181.4 146 63.0
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 6.6e-44 181.0 150 60.7
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 6.6e-44 181.0 150 63.3
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.9e-43 179.5 148 62.8
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 2.5e-43 179.1 150 61.3
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 5.6e-43 177.9 145 62.8
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 9.6e-43 177.2 149 59.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.3e-42 176.8 146 62.3
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.3e-42 176.8 146 61.6
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 1.3e-42 176.8 146 61.6
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 3.6e-42 175.3 148 60.8
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 6.2e-42 174.5 148 60.8
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 6.2e-42 174.5 148 60.8
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 6.2e-42 174.5 148 60.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 1.1e-41 173.7 148 59.5
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 1.1e-41 173.7 152 59.2
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 1.4e-41 173.3 172 57.6
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.8e-41 172.9 150 61.3
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 1.8e-41 172.9 150 58.7
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 2.4e-41 172.6 150 57.3
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 3.1e-41 172.2 150 58.0
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 3.1e-41 172.2 150 60.0
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 4.0e-41 171.8 148 60.1
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 4.0e-41 171.8 149 57.7
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 6.9e-41 171.0 151 60.3
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 1.2e-40 170.2 148 60.8
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.6e-40 169.1 172 54.7
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 3.4e-40 168.7 148 60.8
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 3.4e-40 168.7 150 57.3
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 4.5e-40 168.3 148 56.1
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 5.8e-40 167.9 151 55.0
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 9.9e-40 167.2 148 58.8
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 1.3e-39 166.8 158 56.3
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.2e-39 166.0 146 56.8
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 2.9e-39 165.6 122 68.0
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 2.9e-39 165.6 121 67.8
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 4.9e-39 164.9 148 57.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 4.9e-39 164.9 148 58.8
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 6.4e-39 164.5 149 59.1
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.1e-38 163.7 148 55.4
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 1.1e-38 163.7 121 68.6
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 1.9e-38 162.9 148 58.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 2.4e-38 162.5 178 52.2
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.4e-38 162.5 147 56.5
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.2e-38 161.8 166 53.6
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 5.4e-38 161.4 147 57.8
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 5.4e-38 161.4 148 57.4
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 5.4e-38 161.4 147 57.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 5.4e-38 161.4 125 63.2
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 1.2e-37 160.2 124 64.5
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 1.6e-37 159.8 148 56.8
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 4.6e-37 158.3 148 56.1
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 6.0e-37 157.9 144 56.2
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 1.3e-36 156.8 123 61.0
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 2.3e-36 156.0 119 64.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 6.7e-36 154.5 110 70.0
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.5e-35 153.3 123 60.2
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 1.5e-35 153.3 149 51.0
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.9e-35 152.9 124 61.3
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.6e-34 149.8 150 51.3
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 8.1e-34 147.5 150 52.0
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.6e-32 142.5 122 56.6
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 3.4e-32 142.1 124 59.7
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.7e-31 139.8 115 60.0
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.7e-31 139.8 116 60.3
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 8.4e-31 137.5 112 59.8
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 1.8e-28 129.8 112 57.1
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 1.8e-28 129.8 81 82.7
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 3.0e-28 129.0 110 58.2
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 1.9e-27 126.3 111 56.8
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 2.5e-27 125.9 151 49.0
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 4.8e-26 121.7 141 46.1
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 6.2e-26 121.3 146 43.8
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.5e-24 115.2 142 45.8
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 7.1e-22 107.8 127 44.9
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 1.0e-20 104.0 87 57.5
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 8.7e-20 100.9 117 41.9
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 3.3e-19 99.0 142 38.7
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 5.7e-19 98.2 80 66.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 4.8e-18 95.1 85 56.5
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.3e-18 94.7 70 64.3
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 2.4e-17 92.8 70 67.1
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 2.6e-16 89.4 69 63.8
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.6e-16 89.4 71 59.2
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.8e-15 85.5 70 57.1
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.7e-12 74.7 98 43.9
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 5.3e-09 65.1 139 28.8
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.5e-08 63.5 51 62.7
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.5e-08 63.5 57 57.9
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 7.7e-08 61.2 60 55.0


User provided reference genes

Program Settings