Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 1.3e-97 359.8 181 100.0
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 2.6e-87 325.5 181 88.4
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 4.5e-87 324.7 181 87.8
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 1.9e-85 319.3 179 86.6
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 4.2e-85 318.2 178 88.2
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 2.5e-82 308.9 181 84.0
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 6.3e-81 304.3 179 81.6
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 1.8e-80 302.8 181 82.3
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 6.9e-80 300.8 181 81.2
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 9.1e-80 300.4 179 81.6
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.2e-79 300.1 179 82.7
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 3.4e-79 298.5 179 81.6
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 4.5e-79 298.1 179 81.6
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 5.9e-79 297.7 179 80.4
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 5.9e-79 297.7 181 81.2
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 7.7e-79 297.4 179 81.6
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 7.7e-79 297.4 181 80.1
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 7.7e-79 297.4 179 81.6
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 1.0e-78 297.0 181 80.1
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 1.3e-78 296.6 179 81.0
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 2.2e-78 295.8 179 79.9
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 2.9e-78 295.4 181 80.7
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 2.9e-78 295.4 181 79.6
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 3.8e-78 295.0 181 80.1
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 6.5e-78 294.3 177 81.9
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 8.5e-78 293.9 177 80.8
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 8.5e-78 293.9 181 80.1
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.4e-77 293.1 179 79.3
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 1.4e-77 293.1 179 79.9
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 2.5e-77 292.4 177 81.4
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 3.2e-77 292.0 177 81.4
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 3.2e-77 292.0 177 81.4
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 4.2e-77 291.6 181 80.1
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.2e-76 290.0 181 77.9
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 1.2e-76 290.0 168 85.1
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 1.6e-76 289.7 179 79.3
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 2.1e-76 289.3 168 85.1
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 2.7e-76 288.9 177 80.2
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 3.6e-76 288.5 179 78.8
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 4.7e-76 288.1 181 77.9
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 4.7e-76 288.1 181 77.9
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 4.7e-76 288.1 179 80.4
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 6.1e-76 287.7 168 85.7
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 7.9e-76 287.3 181 76.8
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 7.9e-76 287.3 181 77.3
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.0e-75 287.0 179 77.7
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 1.0e-75 287.0 179 79.3
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 1.8e-75 286.2 183 78.1
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 1.8e-75 286.2 181 76.2
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 2.3e-75 285.8 179 78.2
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 3.0e-75 285.4 179 78.2
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 6.7e-75 284.3 181 77.3
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 6.7e-75 284.3 182 76.9
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 8.8e-75 283.9 181 76.2
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 8.8e-75 283.9 181 76.2
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 1.5e-74 283.1 181 76.2
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 1.5e-74 283.1 181 75.7
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 1.5e-74 283.1 179 77.1
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 2.0e-74 282.7 179 77.7
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.6e-74 282.3 181 76.8
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 2.6e-74 282.3 181 75.7
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.6e-74 282.3 181 75.7
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 3.3e-74 282.0 181 76.8
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 3.3e-74 282.0 181 76.8
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 5.7e-74 281.2 170 81.8
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 5.7e-74 281.2 181 75.7
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 7.4e-74 280.8 176 77.8
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 7.4e-74 280.8 181 75.7
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 9.7e-74 280.4 181 76.2
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 9.7e-74 280.4 169 82.2
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 1.3e-73 280.0 181 74.0
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 2.2e-73 279.3 177 77.4
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 2.2e-73 279.3 176 78.4
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 3.7e-73 278.5 181 75.1
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 4.8e-73 278.1 177 76.8
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 6.3e-73 277.7 182 75.3
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 1.1e-72 276.9 175 78.9
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 1.4e-72 276.6 176 76.1
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 1.4e-72 276.6 182 74.7
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 1.4e-72 276.6 182 74.7
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 1.4e-72 276.6 182 74.7
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.8e-72 276.2 181 76.8
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 4.1e-72 275.0 182 74.2
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 4.1e-72 275.0 179 77.7
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 5.3e-72 274.6 182 74.7
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 7.0e-72 274.2 201 70.1
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 9.1e-72 273.9 167 80.8
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 9.1e-72 273.9 174 78.2
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 2.0e-71 272.7 174 77.6
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 3.5e-71 271.9 177 76.8
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 5.9e-71 271.2 174 75.9
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 5.9e-71 271.2 181 75.1
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 7.7e-71 270.8 179 73.2
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 7.7e-71 270.8 179 73.2
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 7.7e-71 270.8 177 76.8
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 1.0e-70 270.4 177 76.3
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 1.7e-70 269.6 176 76.7
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 2.2e-70 269.2 169 78.1
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 3.8e-70 268.5 177 76.8
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 6.5e-70 267.7 177 76.3
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 6.5e-70 267.7 170 76.5
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 6.5e-70 267.7 168 79.2
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.1e-69 266.9 175 76.6
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 2.5e-69 265.8 178 72.5
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 3.2e-69 265.4 170 75.9
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 3.2e-69 265.4 177 75.7
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 5.5e-69 264.6 170 78.2
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 7.2e-69 264.2 177 74.6
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 1.2e-68 263.5 183 72.7
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 1.2e-68 263.5 183 72.7
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 1.6e-68 263.1 168 76.8
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 1.6e-68 263.1 168 78.6
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 3.6e-68 261.9 178 73.6
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 8.0e-68 260.8 169 76.3
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 8.0e-68 260.8 195 69.7
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 8.0e-68 260.8 177 74.0
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 3.9e-67 258.5 181 74.0
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 6.7e-67 257.7 178 72.5
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 1.1e-66 256.9 168 78.0
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 6.3e-65 251.1 161 78.3
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 1.4e-64 250.0 178 71.3
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 2.4e-64 249.2 181 70.2
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 3.1e-64 248.8 180 71.1
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 3.1e-64 248.8 167 71.3
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 7.7e-63 244.2 182 69.2
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 1.0e-62 243.8 179 68.7
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.2e-58 230.3 181 66.9
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 1.2e-58 230.3 258 52.3
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 1.5e-58 229.9 148 79.1
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 2.8e-57 225.7 150 76.7
SMO367G0045 Selaginella moellendorffii HOM05D004383 ORTHO05D005050 3.7e-57 225.3 165 64.8
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 9.1e-56 220.7 169 62.1
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis HOM05D004383 ORTHO05D005050 2.2e-54 216.1 177 60.5
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 8.8e-51 204.1 169 58.6
CBR_g29297 Chara braunii HOM05D004383 ORTHO05D005050 4.5e-47 191.8 167 57.5
BcaNung06638 Brassica carinata HOM05D004383 ORTHO05D005050 4.2e-45 185.3 128 71.9
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 2.7e-39 166.0 102 82.4
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 7.3e-37 157.9 172 52.9
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 9.8e-34 147.5 102 74.5
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 3.2e-32 142.5 114 66.7
PRCOL_00000905 Prasinoderma coloniale HOM05D004383 ORTHO05D005050 1.2e-26 124.0 172 40.1
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 7.5e-26 121.3 75 77.3
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 7.5e-26 121.3 75 77.3
HPP92_021971 Vanilla planifolia HOM05D004383 ORTHO05D005050 4.9e-25 118.6 80 73.8
MCO09G762 Micromonas commoda HOM05D004383 ORTHO05D005050 1.1e-24 117.5 176 38.1
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 2.1e-23 113.2 62 88.7
TAR383G0705 Trochodendron aralioides HOM05D004383 ORTHO05D005050 1.7e-22 110.2 66 77.3
CSS0013447 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.0e-18 96.7 57 78.9
Cfa024789 Carpinus fangiana HOM05D004383 ORTHO05D005050 7.5e-18 94.7 145 38.6
DCAR_031730 Daucus carota HOM05D004383 ORTHO05D005050 2.2e-17 93.2 100 53.0
CSS0012906 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 7.1e-16 88.2 52 80.8
DCAR_030622 Daucus carota HOM05D001936 ORTHO05D005050 9.2e-16 87.8 83 57.8
Medtr8g027900 Medicago truncatula HOM05D000337 ORTHO05D000297 1.6e-15 87.0 207 35.7
Cre07.g351700 Chlamydomonas reinhardtii HOM05D004383 ORTHO05D005050 1.0e-14 84.3 166 33.7
Lalb_Chr15g0080471 Lupinus albus HOM05D004383 ORTHO05D005050 1.5e-10 70.5 90 46.7
Atru.chr7.2578 Acer truncatum HOM05D004610 ORTHO05D001148 4.4e-10 68.9 52 67.3
Atru.chr7.2585 Acer truncatum HOM05D004383 ORTHO05D005050 5.8e-10 68.6 45 71.1
C03p33160 Brassica napus HOM05D004383 ORTHO05D005050 1.1e-08 64.3 38 76.3
BolC3t15641H Brassica oleracea HOM05D004383 ORTHO05D005050 1.1e-08 64.3 38 76.3
Lalb_Chr10g0093521 Lupinus albus HOM05D004383 ORTHO05D005050 1.1e-08 64.3 38 84.2
Lalb_Chr15g0078021 Lupinus albus HOM05D004383 ORTHO05D005050 3.2e-08 62.8 88 45.5
BcaB07g33518 Brassica carinata HOM05D001184 ORTHO05D005050 1.2e-07 60.8 43 69.8
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea HOM05D004383 ORTHO05D005050 2.3e-06 56.6 35 77.1
MD03G1162600 Malus domestica HOM05D004383 ORTHO05D005050 3.0e-06 56.2 43 65.1
RcHm_v2.0_Chr3g0494951 Rosa chinensis HOM05D004383 ORTHO05D005050 3.0e-06 56.2 29 86.2
Lalb_Chr01g0013281 Lupinus albus HOM05D004383 ORTHO05D005050 8.7e-06 54.7 50 60.0


User provided reference genes

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