Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 3.6e-115 418.3 217 100.0
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 3.2e-87 325.5 217 79.7
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 3.1e-82 308.9 220 77.3
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 1.2e-81 307.0 217 74.7
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 7.8e-78 294.3 217 73.3
Oeu009650.1 Olea europaea HOM05D004800 ORTHO05D005842 2.5e-76 289.3 212 73.1
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 3.2e-71 272.3 214 68.7
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 1.2e-67 260.4 207 65.2
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 1.6e-67 260.0 213 63.8
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 9.9e-65 250.8 203 64.5
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 3.8e-64 248.8 208 63.0
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 8.4e-64 247.7 199 63.8
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 1.4e-63 246.9 211 62.6
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.9e-63 246.5 204 62.7
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 2.4e-63 246.1 207 63.3
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 2.4e-63 246.1 207 63.3
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 7.1e-63 244.6 211 62.1
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 9.2e-63 244.2 204 61.8
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 2.7e-62 242.7 202 62.4
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 3.5e-62 242.3 205 62.9
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 1.7e-61 240.0 203 61.6
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 3.9e-61 238.8 208 61.5
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 6.6e-61 238.0 205 61.5
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 8.6e-61 237.7 201 60.7
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 1.1e-60 237.3 208 61.1
Nitab4.5_0010613g0010 Nicotiana tabacum HOM05D004800 ORTHO05D005842 1.1e-60 237.3 220 60.0
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 1.9e-60 236.5 200 60.5
Peaxi162Scf00006g00249 Petunia axillaris HOM05D004800 ORTHO05D005842 9.6e-60 234.2 205 60.0
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 2.1e-59 233.0 196 61.2
PGSC0003DMG401028727 Solanum tuberosum HOM05D004800 ORTHO05D005842 3.6e-59 232.3 212 59.4
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 4.7e-59 231.9 204 60.8
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 6.2e-59 231.5 201 61.2
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 8.1e-59 231.1 200 58.0
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 8.1e-59 231.1 210 58.6
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.4e-58 230.3 204 61.3
Solyc07g008750.4 Solanum lycopersicum HOM05D004800 ORTHO05D005842 1.4e-58 230.3 213 58.2
FAN27G0477 Fragaria x ananassa HOM05D004800 ORTHO05D005842 2.4e-58 229.6 206 57.8
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.4e-58 229.6 208 60.1
CSS0021373 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 5.2e-58 228.4 182 65.4
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 6.9e-58 228.0 208 55.8
Hund02986 Selenicereus undatus HOM05D004800 ORTHO05D005842 6.9e-58 228.0 204 59.3
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 8.9e-58 227.6 204 56.4
FAN20G2958 Fragaria x ananassa HOM05D004800 ORTHO05D005842 1.2e-57 227.3 206 57.3
Sopen07g004690 Solanum pennellii HOM05D004800 ORTHO05D005842 1.5e-57 226.9 197 60.4
RcHm_v2.0_Chr6g0299361 Rosa chinensis HOM05D004800 ORTHO05D005842 3.4e-57 225.7 208 56.2
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.3e-56 223.8 205 55.1
Actinidia14132 Actinidia chinensis HOM05D004800 ORTHO05D005842 1.7e-56 223.4 210 60.0
AUR62024801 Chenopodium quinoa HOM05D004800 ORTHO05D005842 2.2e-56 223.0 196 59.2
FvH4_2g41170 Fragaria vesca HOM05D004800 ORTHO05D005842 2.2e-56 223.0 206 55.8
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 3.8e-56 222.2 205 57.1
AUR62032420 Chenopodium quinoa HOM05D004800 ORTHO05D005842 4.9e-56 221.9 196 58.2
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 8.4e-56 221.1 199 57.8
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 1.1e-55 220.7 208 55.3
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 5.4e-55 218.4 205 55.6
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 7.1e-55 218.0 212 54.2
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 7.1e-55 218.0 212 54.2
Ca_15781_v3 Cicer arietinum L. HOM05D004800 ORTHO05D005842 7.1e-55 218.0 207 56.0
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 1.6e-54 216.9 179 61.5
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 2.7e-54 216.1 210 53.3
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 3.5e-54 215.7 215 53.0
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 3.5e-54 215.7 192 56.8
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 4.6e-54 215.3 207 53.6
Actinidia23108 Actinidia chinensis HOM05D004800 ORTHO05D005842 6.0e-54 214.9 211 56.9
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 6.0e-54 214.9 210 52.9
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 7.8e-54 214.5 209 54.1
EL10Ac2g02494 Beta vulgaris HOM05D004800 ORTHO05D005842 1.3e-53 213.8 204 56.9
Psat5g033480 Pisum sativum HOM05D004800 ORTHO05D005842 1.7e-53 213.4 201 55.2
Sabra18G0021000 Salix brachista HOM05D004800 ORTHO05D005842 2.3e-53 213.0 211 54.5
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 3.0e-53 212.6 199 54.8
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 6.6e-53 211.5 192 56.2
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 1.1e-52 210.7 209 55.0
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 2.5e-52 209.5 201 54.2
TPR.G1887 Trifolium pratense HOM05D004800 ORTHO05D005842 3.3e-52 209.1 210 52.4
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 5.6e-52 208.4 204 53.4
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 7.3e-52 208.0 202 54.0
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 9.6e-52 207.6 200 56.0
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.3e-51 207.2 192 55.2
C07p42740 Brassica napus HOM05D004800 ORTHO05D005842 6.2e-51 204.9 238 48.3
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 6.2e-51 204.9 199 51.8
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 1.4e-50 203.8 205 55.1
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 3.1e-50 202.6 198 51.5
BolC7t44804H Brassica oleracea HOM05D004800 ORTHO05D005842 3.1e-50 202.6 238 47.9
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 3.1e-50 202.6 204 52.0
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 3.1e-50 202.6 204 52.5
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 4.0e-50 202.2 212 51.4
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 6.9e-50 201.4 209 52.2
Medtr3g105925 Medicago truncatula HOM05D004800 ORTHO05D005842 9.0e-50 201.1 201 54.2
BcaC04g23570 Brassica carinata HOM05D004800 ORTHO05D005842 2.0e-49 199.9 209 53.1
C09p07000 Brassica napus HOM05D004800 ORTHO05D005842 2.0e-49 199.9 209 53.1
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 3.4e-49 199.1 209 52.6
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 9.9e-49 197.6 182 56.0
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 1.3e-48 197.2 202 51.0
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 2.2e-48 196.4 202 51.0
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.8e-48 195.7 209 51.7
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 8.4e-48 194.5 215 48.8
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 2.1e-46 189.9 198 49.5
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 2.7e-46 189.5 199 48.7
BolC9t53616H Brassica oleracea HOM05D004800 ORTHO05D005842 3.5e-46 189.1 208 51.0
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 3.5e-46 189.1 210 48.6
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 1.0e-45 187.6 208 46.6
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 3.0e-45 186.0 205 49.3
Lalb_Chr11g0063501 Lupinus albus HOM05D004800 ORTHO05D005842 5.1e-45 185.3 169 58.6
CANSAT35G0701 Cannabis sativa HOM05D004800 ORTHO05D005842 6.7e-45 184.9 206 50.5
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 1.3e-43 180.6 201 49.8
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 2.1e-43 179.9 199 48.7
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 4.8e-43 178.7 212 44.8
unitig_26.g9784 Utricularia gibba HOM05D004800 ORTHO05D005842 1.2e-41 174.1 207 51.7
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 4.5e-41 172.2 140 60.0
Os08g0270200 Oryza sativa ssp. japonica HOM05D004800 ORTHO05D005842 3.8e-40 169.1 203 46.3
arahy.Tifrunner.gnm1.ann1.D8NHAG Arachis hypogaea HOM05D004800 ORTHO05D005842 1.9e-39 166.8 208 44.2
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 9.3e-39 164.5 215 45.1
Zm00001eb177850 Zea mays HOM05D004800 ORTHO05D005842 9.3e-39 164.5 203 45.8
Peaxi162Scf01038g00137 Petunia axillaris HOM05D004800 ORTHO05D005842 1.6e-38 163.7 119 71.4
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 3.0e-37 159.5 139 60.4
BcaB04g19808 Brassica carinata HOM05D004800 ORTHO05D005842 9.6e-36 154.5 203 46.3
Potri.018G018100 Populus trichocarpa HOM05D004800 ORTHO05D005842 2.6e-33 146.4 122 63.1
arahy.Tifrunner.gnm1.ann1.1BAV2G Arachis hypogaea HOM05D004800 ORTHO05D005842 4.5e-33 145.6 210 40.0
MBI14_g09103_MAGBIO Magnolia biondii HOM05D004800 ORTHO05D005842 4.5e-33 145.6 207 43.5
Nitab4.5_0000617g0080 Nicotiana tabacum HOM05D004800 ORTHO05D005842 3.3e-28 129.4 85 75.3
Lj5g0013304 Lotus japonicus HOM05D004800 ORTHO05D005842 2.1e-27 126.7 197 39.6
arahy.Tifrunner.gnm1.ann1.D9UBCD Arachis hypogaea HOM05D004800 ORTHO05D005842 3.1e-26 122.9 205 35.1
arahy.Tifrunner.gnm1.ann1.CUZL6Q Arachis hypogaea HOM05D004800 ORTHO05D005842 9.0e-26 121.3 205 35.1
arahy.Tifrunner.gnm1.ann1.N4WP0Z Arachis hypogaea HOM05D004800 ORTHO05D005842 9.0e-26 121.3 205 35.1
arahy.Tifrunner.gnm1.ann1.YE5PM3 Arachis hypogaea HOM05D004800 ORTHO05D005842 5.9e-25 118.6 205 34.1
Phvul.001G041300 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 2.9e-24 116.3 198 36.9
VMungo0647G1387 Vigna mungo HOM05D004800 ORTHO05D005842 1.0e-21 107.8 201 36.3
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 8.7e-21 104.8 181 33.7
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 8.7e-21 104.8 177 37.3
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 3.7e-19 99.4 183 31.7
Glyma.14G101700 Glycine max HOM05D004800 ORTHO05D005842 8.2e-19 98.2 197 32.0
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 4.1e-18 95.9 188 31.9
TPR.G38911 Trifolium pratense HOM05D004800 ORTHO05D005842 6.9e-18 95.1 192 34.9
Psat6g026000 Pisum sativum HOM05D004800 ORTHO05D005842 7.7e-17 91.7 183 32.8
Medtr1g014130 Medicago truncatula HOM05D004800 ORTHO05D005842 1.8e-13 80.5 170 31.8
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 4.4e-12 75.9 95 34.7
Zm00001eb353150 Zea mays HOM05D004800 ORTHO05D005842 9.7e-12 74.7 127 39.4
Lalb_Chr24g0401961 Lupinus albus HOM05D004800 ORTHO05D005842 4.8e-11 72.4 108 34.3
Sopen01g020190 Solanum pennellii HOM05D004800 ORTHO05D005842 4.8e-11 72.4 69 58.0
Sopen01g040360 Solanum pennellii HOM05D004800 ORTHO05D005842 1.8e-10 70.5 69 55.1
Sopen07g026310 Solanum pennellii HOM05D004800 ORTHO05D005842 1.8e-10 70.5 69 55.1
Sopen11g020420 Solanum pennellii HOM05D004800 ORTHO05D010331 1.8e-10 70.5 61 62.3
Sed0015580 Sechium edule HOM05D004800 ORTHO05D005842 5.3e-10 68.9 70 44.3
Sopen07g029020 Solanum pennellii HOM05D004800 ORTHO05D005842 6.9e-10 68.6 61 59.0
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 2.6e-09 66.6 232 24.6
MCO11G643 Micromonas commoda HOM05D004800 ORTHO05D005842 1.4e-07 60.8 114 28.9
Oeu042654.1 Olea europaea HOM05D004800 ORTHO05D005842 1.6e-06 57.4 96 44.8


User provided reference genes

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