Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 0.0e+00 1085.1 524 100.0
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 9.8e-244 846.7 516 78.9
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 1.1e-234 816.6 516 75.6
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 3.9e-232 808.1 514 74.5
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 1.3e-227 793.1 510 75.9
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 2.4e-226 788.9 510 74.1
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 4.1e-226 788.1 490 75.3
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.4e-226 787.7 516 72.5
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.4e-226 787.7 516 72.5
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 9.2e-226 786.9 516 73.6
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 3.5e-225 785.0 510 73.7
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 6.0e-225 784.3 514 71.2
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 1.0e-224 783.5 515 72.8
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.3e-224 783.1 497 73.4
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 3.0e-224 781.9 512 73.0
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 1.2e-222 776.5 502 72.3
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.2e-222 776.5 479 75.4
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.1e-222 775.8 514 71.6
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 2.4e-221 772.3 482 74.7
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 5.2e-221 771.2 511 71.8
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 6.9e-221 770.8 488 73.6
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 2.0e-220 769.2 474 75.7
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 1.7e-219 766.1 485 74.8
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 6.4e-219 764.2 518 71.8
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 2.4e-218 762.3 494 71.9
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 2.4e-218 762.3 512 70.9
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 4.2e-218 761.5 487 72.9
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 1.6e-217 759.6 474 74.3
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 1.6e-217 759.6 488 73.8
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 2.1e-217 759.2 473 75.9
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 3.5e-217 758.4 485 72.8
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 4.6e-217 758.1 494 72.1
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 4.6e-217 758.1 488 74.2
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.7e-216 756.1 494 72.3
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 2.3e-216 755.7 512 70.3
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 3.0e-216 755.4 493 71.8
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 3.9e-216 755.0 486 72.8
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 6.6e-216 754.2 514 71.0
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 8.7e-216 753.8 497 70.8
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.9e-215 752.7 498 71.3
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 2.5e-215 752.3 502 72.7
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.3e-215 751.9 491 72.3
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 1.3e-214 750.0 484 71.7
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.3e-214 750.0 554 67.1
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 3.6e-214 748.4 479 73.1
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.4e-213 746.5 478 72.8
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.4e-213 746.5 500 71.0
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 1.8e-213 746.1 495 71.7
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 2.4e-213 745.7 494 71.9
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 4.0e-213 745.0 482 72.8
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 6.9e-213 744.2 491 71.9
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 9.0e-213 743.8 488 71.5
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 9.0e-213 743.8 485 71.5
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 1.5e-212 743.0 456 75.7
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 3.4e-212 741.9 488 71.5
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 4.5e-212 741.5 493 71.0
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 4.5e-212 741.5 510 69.2
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 9.9e-212 740.3 493 70.8
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 1.1e-210 736.9 506 70.2
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 3.2e-210 735.3 493 71.4
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.2e-210 735.3 522 67.6
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 2.7e-209 732.3 506 70.0
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 1.8e-208 729.6 486 69.3
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 3.0e-208 728.8 490 70.0
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 3.9e-208 728.4 483 70.6
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.5e-207 725.7 493 70.0
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 1.3e-206 723.4 472 72.0
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 8.1e-206 720.7 478 70.7
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 1.8e-205 719.5 511 66.5
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 4.0e-205 718.4 499 67.3
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 6.9e-205 717.6 478 70.1
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 4.5e-204 714.9 477 70.0
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 5.8e-204 714.5 478 70.3
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.9e-202 709.5 479 70.8
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 5.5e-202 708.0 478 69.0
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 1.2e-201 706.8 478 68.8
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 1.2e-201 706.8 478 68.8
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 2.1e-201 706.1 478 68.8
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 6.0e-201 704.5 481 68.4
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 1.0e-200 703.7 508 67.5
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.3e-200 703.4 478 68.6
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.1e-199 700.3 485 68.7
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 1.9e-199 699.5 477 69.8
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 3.3e-199 698.7 501 66.5
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 4.3e-199 698.4 481 68.4
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 4.3e-199 698.4 475 68.6
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 1.8e-197 693.0 502 65.9
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 2.6e-196 689.1 453 72.8
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 7.6e-196 687.6 484 68.4
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 4.9e-195 684.9 476 67.6
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 3.2e-194 682.2 503 65.0
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 1.8e-192 676.4 525 62.5
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 7.2e-186 654.4 478 67.8
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 6.1e-185 651.4 478 65.3
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 1.4e-173 613.6 498 61.8
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 9.1e-165 584.3 480 57.5
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.8e-158 562.8 378 70.4
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 6.3e-150 535.0 347 71.2
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 4.5e-148 528.9 370 68.6
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 2.1e-145 520.0 336 72.0
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 4.9e-142 508.8 332 70.5
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.8e-120 437.2 290 68.3
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 6.8e-120 435.3 280 70.4
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.4e-117 426.8 486 49.0
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 1.2e-100 371.3 236 68.2
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 6.0e-92 342.4 214 69.2
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 3.5e-76 290.0 183 69.9
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.7e-62 244.6 170 70.6
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 2.7e-60 237.3 148 69.6
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.5e-58 231.5 151 75.5
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 7.5e-26 122.9 109 60.6
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 2.7e-15 87.8 115 45.2
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 4.6e-15 87.0 52 71.2
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 5.6e-13 80.1 78 52.6
Ah.12g060990 Amaranthus hybridus HOM05D006934 ORTHO05D008743 1.0e-06 59.3 63 55.6
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 2.3e-06 58.2 51 56.9


User provided reference genes

Program Settings