Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 5.7e-109 397.5 190 100.0
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 2.7e-98 362.1 190 89.5
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 1.1e-91 340.1 193 86.5
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.9e-88 329.3 175 87.4
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 7.3e-88 327.4 185 85.9
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 2.8e-87 325.5 187 85.0
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 4.7e-87 324.7 191 82.7
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.0e-86 321.6 187 84.5
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 4.0e-86 321.6 173 88.4
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.2e-86 321.2 187 84.5
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.4e-85 318.5 187 84.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 4.4e-85 318.2 191 80.6
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 5.8e-85 317.8 172 87.8
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 1.7e-84 316.2 195 79.5
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 2.2e-84 315.8 180 83.3
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.9e-84 314.7 189 82.0
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.1e-83 313.5 185 81.6
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.1e-83 313.5 182 80.8
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 1.9e-83 312.8 196 77.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 4.1e-83 311.6 200 75.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 5.4e-83 311.2 195 78.5
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 7.0e-83 310.8 194 77.3
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 9.2e-83 310.5 171 84.8
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.2e-82 310.1 172 83.7
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 1.2e-82 310.1 189 77.2
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 2.0e-82 309.3 195 76.9
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 2.0e-82 309.3 171 84.8
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 2.0e-82 309.3 171 84.8
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.7e-82 308.9 195 79.0
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.5e-82 308.5 189 79.4
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 6.0e-82 307.8 194 77.3
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.3e-81 306.6 189 77.8
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.3e-81 306.6 194 77.3
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 5.0e-81 304.7 167 83.2
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 5.0e-81 304.7 174 81.6
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 6.6e-81 304.3 174 81.0
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 8.6e-81 303.9 171 82.5
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 8.6e-81 303.9 178 80.3
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.9e-80 302.8 179 79.3
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.9e-80 302.8 194 76.3
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 2.5e-80 302.4 178 79.2
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.5e-80 302.4 172 82.6
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 4.3e-80 301.6 194 75.3
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 5.6e-80 301.2 191 75.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 5.6e-80 301.2 178 78.1
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 7.3e-80 300.8 193 76.7
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 9.5e-80 300.4 197 74.6
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 1.2e-79 300.1 168 81.5
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 1.6e-79 299.7 165 82.4
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 1.6e-79 299.7 198 76.3
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 2.1e-79 299.3 168 81.0
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 2.1e-79 299.3 176 81.2
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 2.1e-79 299.3 165 83.6
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.1e-78 297.0 192 76.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 2.3e-78 295.8 165 81.8
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 3.1e-78 295.4 172 80.8
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 4.0e-78 295.0 165 81.2
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 5.2e-78 294.7 179 75.4
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 5.2e-78 294.7 194 75.3
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 5.2e-78 294.7 195 73.8
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 6.8e-78 294.3 175 77.7
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.2e-77 293.5 172 80.2
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 2.6e-77 292.4 184 77.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 2.6e-77 292.4 176 80.1
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.6e-77 292.4 193 75.1
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 3.4e-77 292.0 188 73.4
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 5.8e-77 291.2 182 76.9
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 5.8e-77 291.2 190 74.7
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 7.5e-77 290.8 153 90.2
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 9.8e-77 290.4 199 71.4
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 2.2e-76 289.3 173 78.6
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 5.4e-75 284.6 172 76.7
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.2e-74 283.5 200 69.5
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.6e-74 283.1 172 79.1
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 1.2e-71 273.5 205 69.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 4.7e-71 271.6 181 73.5
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 8.9e-70 267.3 164 79.3
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.4e-67 260.0 149 84.6
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 2.1e-66 256.1 188 65.4
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.5e-64 249.2 153 77.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.5e-64 249.2 155 77.4
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 7.3e-64 247.7 141 79.4
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 7.3e-64 247.7 161 75.8
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 1.2e-63 246.9 167 68.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.2e-63 246.9 146 80.8
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 1.2e-63 246.9 137 81.8
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 7.6e-61 237.7 161 75.2
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.9e-60 235.7 138 78.3
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 1.4e-59 233.4 163 65.0
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 4.2e-59 231.9 167 64.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.4e-59 231.5 165 68.5
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.3e-57 226.1 152 70.4
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 1.5e-53 213.4 111 87.4
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.4e-46 190.3 152 57.9
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 6.0e-42 174.9 136 64.7
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 2.4e-30 136.3 140 45.7
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 3.8e-20 102.4 165 40.6
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 8.5e-12 74.7 38 84.2
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 1.1e-11 74.3 133 36.8
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 7.0e-06 55.1 133 36.1


User provided reference genes

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