Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00256 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.4e-171 605.5 333 100.0
Migut.O00735 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.8e-50 203.4 332 40.7
SGA_v2.0_scaffold26G11270 Striga asiatica HOM05D005101 ORTHO05D001271 3.6e-42 176.4 329 34.7
Migut.C00640 Erythranthe guttata HOM05D005101 ORTHO05D001271 1.2e-40 171.4 325 35.4
Migut.C00341 Erythranthe guttata HOM05D005101 ORTHO05D001271 2.6e-40 170.2 325 35.1
MSTRG.24898 Avicennia marina HOM05D005101 ORTHO05D001271 2.3e-36 157.1 313 33.2
Oeu059862.1 Olea europaea HOM05D005101 ORTHO05D001271 3.9e-36 156.4 330 33.3
Dinv23351 Davidia involucrata HOM05D005101 ORTHO05D001271 3.1e-33 146.7 330 32.1
Oeu064738.2 Olea europaea HOM05D005101 ORTHO05D001271 7.6e-32 142.1 330 32.4
Nitab4.5_0002112g0140 Nicotiana tabacum HOM05D005101 ORTHO05D001271 9.9e-32 141.7 322 30.4
Oeu030369.3 Olea europaea HOM05D005101 ORTHO05D001271 2.9e-31 140.2 306 32.0
Nitab4.5_0000694g0200 Nicotiana tabacum HOM05D005101 ORTHO05D001271 3.2e-30 136.7 322 29.8
Cc10_g00130 Coffea canephora HOM05D005101 ORTHO05D001271 5.4e-30 136.0 332 32.2
MELO3C017068.2 Cucumis melo HOM05D005101 ORTHO05D001271 5.4e-30 136.0 318 31.4
Lj4C813T13 Lonicera japonica HOM05D005101 ORTHO05D001271 7.1e-30 135.6 330 30.9
CiPaw.07G130900 Carya illinoinensis HOM05D005101 ORTHO05D001271 9.3e-30 135.2 321 33.0
CSS0024940 Camellia sinensis var. sinensis HOM05D005101 ORTHO05D001271 3.5e-29 133.3 320 30.9
Peaxi162Scf00205g01431 Petunia axillaris HOM05D005101 ORTHO05D001271 3.5e-29 133.3 319 29.8
SalBow7G2128 Salvia bowleyana HOM05D005101 ORTHO05D001271 3.5e-29 133.3 324 32.4
CsaV3_4G037750 Cucumis sativus L. HOM05D005101 ORTHO05D001271 4.6e-29 132.9 318 30.8
QL02p016087 Quercus lobata HOM05D005101 ORTHO05D001271 1.1e-27 128.3 320 31.2
Sabra06G0146700 Salix brachista HOM05D005101 ORTHO05D001271 1.5e-27 127.9 318 31.8
CAN.G610.9 Capsicum annuum HOM05D005101 ORTHO05D001271 1.9e-27 127.5 308 29.5
Potri.006G191500 Populus trichocarpa HOM05D005101 ORTHO05D001271 2.5e-27 127.1 318 30.2
Prupe.5G002400 Prunus persica HOM05D005101 ORTHO05D001271 2.5e-27 127.1 330 30.6
Sc22g0001420 Simmondsia chinensis HOM05D005101 ORTHO05D001271 2.5e-27 127.1 318 30.2
CiPaw.08G078400 Carya illinoinensis HOM05D005101 ORTHO05D001271 3.3e-27 126.7 328 32.3
unitig_32.g11138 Utricularia gibba HOM05D005101 ORTHO05D001271 5.6e-27 125.9 313 29.7
Sopen05g004540 Solanum pennellii HOM05D005101 ORTHO05D001271 7.3e-27 125.6 320 28.8
Sed0027880 Sechium edule HOM05D005101 ORTHO05D001271 1.3e-26 124.8 318 29.6
Hma1.2p1_0914F.1_g236180 Hydrangea macrophylla HOM05D005101 ORTHO05D001271 6.2e-26 122.5 334 28.1
TAR381G0675 Trochodendron aralioides HOM05D005101 ORTHO05D001271 1.8e-25 120.9 318 30.8
Cpa.g.sc36.107 Carica papaya HOM05D005101 ORTHO05D001271 2.4e-25 120.6 330 29.1
CANSAT64G2160 Cannabis sativa HOM05D005101 ORTHO05D001271 3.1e-25 120.2 330 30.0
MD06G1001600 Malus domestica HOM05D005101 ORTHO05D001271 3.1e-25 120.2 330 29.4
AT1G20970 Arabidopsis thaliana HOM05D005101 ORTHO05D001271 5.3e-25 119.4 333 29.7
HanXRQChr07g0204251 Helianthus annuus HOM05D005101 ORTHO05D001271 6.9e-25 119.0 321 29.9
AL1G34040 Arabidopsis lyrata HOM05D005101 ORTHO05D001271 1.2e-24 118.2 333 29.1
BcaB07g32090 Brassica carinata HOM05D005101 ORTHO05D001271 1.5e-24 117.9 328 28.7
TAR376G0758 Trochodendron aralioides HOM05D005101 ORTHO05D001271 1.5e-24 117.9 331 28.7
EL10Ac5g12200 Beta vulgaris HOM05D005101 ORTHO05D001271 2.0e-24 117.5 335 27.5
Carub.0001s2044 Capsella rubella HOM05D005101 ORTHO05D001271 4.5e-24 116.3 322 29.2
GSVIVG01013451001 Vitis vinifera HOM05D005101 ORTHO05D001271 4.5e-24 116.3 330 27.9
Atru.chr13.27 Acer truncatum HOM05D005101 ORTHO05D001271 5.8e-24 115.9 330 30.6
Haze_22881 Corylus avellana HOM05D005101 ORTHO05D001271 5.8e-24 115.9 317 30.3
Ciclev10000062m.g Citrus clementina HOM05D005101 ORTHO05D001271 9.9e-24 115.2 336 28.6
Migut.H01409 Erythranthe guttata HOM05D005101 ORTHO05D001271 9.9e-24 115.2 225 37.8
Nn5g31073 Nelumbo nucifera HOM05D005101 ORTHO05D001271 9.9e-24 115.2 329 29.8
Thecc.07G035700 Theobroma cacao HOM05D005101 ORTHO05D001271 9.9e-24 115.2 320 30.0
TWI36G1399 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 9.9e-24 115.2 336 30.1
TAR628G1111 Trochodendron aralioides HOM05D005101 ORTHO05D001271 9.9e-24 115.2 318 29.6
AUR62018772 Chenopodium quinoa HOM05D005101 ORTHO05D001271 1.7e-23 114.4 335 27.5
vmacro04431 Vaccinium macrocarpon HOM05D005101 ORTHO05D001271 1.7e-23 114.4 309 27.5
Duzib268G0010 Durio zibethinus HOM05D005101 ORTHO05D001271 2.9e-23 113.6 320 30.6
TWI56G0322 Tripterygium wilfordii HOM05D005101 ORTHO05D001271 2.9e-23 113.6 333 29.4
Gohir.D01G067200 Gossypium hirsutum HOM05D005101 ORTHO05D001271 3.8e-23 113.2 329 27.7
Dinv05511 Davidia involucrata HOM05D005101 ORTHO05D001271 4.9e-23 112.8 265 30.2
Cfa014159 Carpinus fangiana HOM05D005101 ORTHO05D001271 6.4e-23 112.5 318 29.9
ECA233G5568 Erigeron canadensis HOM05D005101 ORTHO05D001271 6.4e-23 112.5 324 28.7
Aa31LG7G5150 Aethionema arabicum HOM05D005101 ORTHO05D001271 8.4e-23 112.1 328 27.4
BcaC05g26005 Brassica carinata HOM05D005101 ORTHO05D001271 8.4e-23 112.1 328 27.7
C05p19640 Brassica napus HOM05D005101 ORTHO05D001271 8.4e-23 112.1 328 27.7
BolC5t30665H Brassica oleracea HOM05D005101 ORTHO05D001271 8.4e-23 112.1 328 27.7
HanXRQChr08g0216541 Helianthus annuus HOM05D005101 ORTHO05D001271 1.4e-22 111.3 321 29.0
Sp1g18670 Schrenkiella parvula HOM05D005101 ORTHO05D001271 1.4e-22 111.3 328 27.7
A06p17010 Brassica napus HOM05D005101 ORTHO05D001271 1.9e-22 110.9 328 27.7
BraA06t24808Z Brassica rapa HOM05D005101 ORTHO05D001271 1.9e-22 110.9 328 27.7
Gohir.A01G080000 Gossypium hirsutum HOM05D005101 ORTHO05D001271 1.9e-22 110.9 329 27.4
Lj2g0011718 Lotus japonicus HOM05D005101 ORTHO05D001271 1.9e-22 110.9 325 28.6
Gorai.002G089100 Gossypium raimondii HOM05D005101 ORTHO05D001271 2.4e-22 110.5 330 27.9
THA.LOC104813728 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 2.4e-22 110.5 328 28.0
AUR62007227 Chenopodium quinoa HOM05D005101 ORTHO05D001271 3.2e-22 110.2 335 27.2
unitig_8.g4908 Utricularia gibba HOM05D005101 ORTHO05D001271 3.2e-22 110.2 327 27.8
CARHR021430 Cardamine hirsuta HOM05D005101 ORTHO05D001271 5.4e-22 109.4 328 27.1
Glyma.07G159600 Glycine max HOM05D005101 ORTHO05D001271 4.6e-21 106.3 332 27.7
Gohir.A04G015650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 7.9e-21 105.5 321 29.9
Actinidia37901 Actinidia chinensis HOM05D005101 ORTHO05D001271 1.0e-20 105.1 309 27.2
Lalb_Chr10g0095281 Lupinus albus HOM05D005101 ORTHO05D001271 2.3e-20 104.0 331 27.2
Lalb_Chr17g0338131 Lupinus albus HOM05D005101 ORTHO05D001271 3.0e-20 103.6 320 26.9
THA.LOC104812021 Tarenaya hassleriana HOM05D005101 ORTHO05D001271 3.0e-20 103.6 329 27.1
Lsat_1_v5_gn_8_25240 Lactuca sativa HOM05D005101 ORTHO05D001271 3.9e-20 103.2 308 26.0
Phvul.003G008900 Phaseolus vulgaris HOM05D005101 ORTHO05D001271 8.7e-20 102.1 331 26.3
PGR031G3180 Punica granatum HOM05D005101 ORTHO05D001271 1.9e-19 100.9 311 27.3
Gorai.009G438800 Gossypium raimondii HOM05D005101 ORTHO05D001271 9.6e-19 98.6 321 29.0
Hund14431 Selenicereus undatus HOM05D005101 ORTHO05D001271 1.3e-18 98.2 356 25.8
FAN13G2092 Fragaria x ananassa HOM05D005101 ORTHO05D001271 2.1e-18 97.4 324 29.3
FvH4_5g26490 Fragaria vesca HOM05D005101 ORTHO05D001271 2.8e-18 97.1 324 29.3
FAN08G1478 Fragaria x ananassa HOM05D005101 ORTHO05D001271 2.8e-18 97.1 324 29.3
FAN18G2527 Fragaria x ananassa HOM05D005101 ORTHO05D001271 2.8e-18 97.1 324 29.3
Rhsim07G0258200 Rhododendron simsii HOM05D005101 ORTHO05D001271 2.8e-18 97.1 308 30.5
DCAR_013950 Daucus carota HOM05D005101 ORTHO05D001271 6.2e-18 95.9 253 30.0
Gohir.D05G370650 Gossypium hirsutum HOM05D005101 ORTHO05D001271 6.2e-18 95.9 312 29.2
Glyma.20G006500 Glycine max HOM05D005101 ORTHO05D001271 1.4e-17 94.7 331 28.4
Ah.07g200000 Amaranthus hybridus HOM05D005101 ORTHO05D001271 2.4e-17 94.0 334 27.8
Sc07g0008820 Simmondsia chinensis HOM05D005101 ORTHO05D001271 3.1e-17 93.6 330 27.0
Manes.05G129900 Manihot esculenta HOM05D005101 ORTHO05D001271 5.3e-17 92.8 265 27.5
Lalb_Chr04g0258871 Lupinus albus HOM05D005101 ORTHO05D001271 2.0e-16 90.9 334 24.3
Ah.12g053660 Amaranthus hybridus HOM05D005101 ORTHO05D001271 2.6e-16 90.5 333 24.3
Gorai.009G439100 Gossypium raimondii HOM05D005101 ORTHO05D001271 2.6e-16 90.5 315 28.9
PSO675G4128 Papaver somniferum HOM05D005101 ORTHO05D001271 3.4e-16 90.1 325 26.8
FAN04G0351 Fragaria x ananassa HOM05D005101 ORTHO05D001271 4.5e-16 89.7 324 28.4
Psat6g132160 Pisum sativum HOM05D005101 ORTHO05D001271 1.3e-15 88.2 339 25.4
CDE10G1114 Ceratophyllum demersum HOM05D005101 ORTHO05D001271 2.2e-15 87.4 192 29.7
RcHm_v2.0_Chr7g0217401 Rosa chinensis HOM05D005101 ORTHO05D001271 3.8e-15 86.7 321 27.7
TPR.G22374 Trifolium pratense HOM05D005101 ORTHO05D001271 3.8e-15 86.7 332 25.0
HPP92_015728 Vanilla planifolia HOM05D005101 ORTHO05D001271 1.9e-14 84.3 313 28.1
Aqoxy6G03044 Aquilegia oxysepala HOM05D005101 ORTHO05D001271 2.5e-14 84.0 330 24.5
Ca_25723_v3 Cicer arietinum L. HOM05D005101 ORTHO05D001271 4.2e-14 83.2 299 24.4
Gohir.D05G370550 Gossypium hirsutum HOM05D005101 ORTHO05D001271 3.5e-13 80.1 196 31.1
Medtr1g035040 Medicago truncatula HOM05D005101 ORTHO05D001271 2.3e-12 77.4 254 26.8
PSO541G3235 Papaver somniferum HOM05D005101 ORTHO05D001271 5.1e-12 76.3 320 29.1
unitig_578.g16098 Utricularia gibba HOM05D005101 ORTHO05D001271 5.1e-12 76.3 165 29.1
DCAR_017623 Daucus carota HOM05D005101 ORTHO05D001271 2.5e-11 73.9 317 24.0
ATR0605G356 Amborella trichopoda HOM05D005101 ORTHO05D001271 4.3e-11 73.2 138 31.2
Thhalv10006715m.g Eutrema salsugineum HOM05D005101 ORTHO05D001271 5.7e-11 72.8 283 24.0
VMungo1215G2445 Vigna mungo HOM05D005101 ORTHO05D001271 5.7e-11 72.8 332 28.9
MBI04_g11526_MAGBIO Magnolia biondii HOM05D005101 ORTHO05D001271 2.1e-10 70.9 324 29.6
Migut.H01346 Erythranthe guttata HOM05D005101 ORTHO05D001271 3.7e-10 70.1 54 63.0
HanXRQChr13g0388431 Helianthus annuus HOM05D005101 ORTHO05D001271 2.4e-09 67.4 275 28.0
arahy.Tifrunner.gnm1.ann1.DXQU4L Arachis hypogaea HOM05D005101 ORTHO05D001271 1.5e-08 64.7 331 27.2
arahy.Tifrunner.gnm1.ann1.CZE161 Arachis hypogaea HOM05D005101 ORTHO05D001271 2.6e-08 63.9 331 27.8
CDE10G0907 Ceratophyllum demersum HOM05D005101 ORTHO05D001271 4.5e-08 63.2 78 39.7
Lsat_1_v5_gn_9_48100 Lactuca sativa HOM05D005101 ORTHO05D001271 5.8e-08 62.8 159 26.4
Lsat_1_v5_gn_4_156701 Lactuca sativa HOM05D005101 ORTHO05D001271 7.6e-08 62.4 144 26.4
Actinidia33602 Actinidia chinensis HOM05D005101 ORTHO05D001271 2.2e-07 60.8 256 22.7
CBR_g45701 Chara braunii HOM05D002105 ORTHO05D001271 2.2e-07 60.8 232 29.7
Zm00001eb102050 Zea mays HOM05D005101 ORTHO05D001271 5.0e-07 59.7 322 20.5


User provided reference genes

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