Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 3.2e-95 351.7 170 100.0
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 8.8e-85 317.0 170 87.6
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.0e-84 315.8 170 88.8
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.7e-83 312.8 170 85.9
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.7e-83 311.6 170 85.9
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 9.1e-82 307.0 170 84.7
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 2.2e-80 302.4 170 83.5
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.5e-80 300.8 170 83.5
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.5e-80 300.8 170 83.5
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 6.5e-80 300.8 170 82.9
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.1e-79 300.1 170 82.9
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.5e-79 299.7 170 82.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.5e-79 298.9 166 84.9
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 3.2e-79 298.5 168 83.3
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 5.5e-79 297.7 168 83.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 7.2e-79 297.4 168 82.7
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 3.6e-78 295.0 168 81.5
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 4.7e-78 294.7 168 80.4
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.0e-77 293.5 167 83.2
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.4e-77 293.1 165 83.0
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.8e-77 292.7 170 80.6
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 1.8e-77 292.7 174 81.0
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 3.0e-77 292.0 168 79.8
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 3.0e-77 292.0 169 82.2
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 3.0e-77 292.0 167 80.2
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 4.0e-77 291.6 166 81.9
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 4.0e-77 291.6 171 81.9
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 5.2e-77 291.2 170 81.2
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 8.8e-77 290.4 171 82.5
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 8.8e-77 290.4 171 80.7
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 8.8e-77 290.4 169 81.1
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 2.0e-76 289.3 168 82.1
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 2.0e-76 289.3 170 81.2
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 5.7e-76 287.7 170 80.6
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 5.7e-76 287.7 171 81.3
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 7.5e-76 287.3 168 79.2
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 7.5e-76 287.3 166 81.3
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 7.5e-76 287.3 167 80.8
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 9.7e-76 287.0 168 80.4
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.7e-75 286.2 168 79.2
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 2.2e-75 285.8 171 79.5
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 2.8e-75 285.4 169 78.7
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 6.3e-75 284.3 171 80.1
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.4e-74 283.1 163 81.6
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.4e-74 283.1 170 78.2
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.8e-74 282.7 170 80.0
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 1.8e-74 282.7 169 78.1
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.1e-74 282.0 171 78.9
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 4.1e-74 281.6 151 88.7
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 4.1e-74 281.6 167 79.0
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 5.3e-74 281.2 172 79.7
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 7.0e-74 280.8 168 78.6
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 7.0e-74 280.8 165 80.0
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 1.6e-73 279.6 165 78.8
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.6e-73 279.6 155 84.5
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 2.0e-73 279.3 166 80.1
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 2.0e-73 279.3 168 78.6
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.7e-73 278.9 170 79.4
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 5.9e-73 277.7 172 77.9
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.9e-73 277.7 168 78.0
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 7.7e-73 277.3 161 82.6
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 7.7e-73 277.3 171 78.9
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.7e-72 276.2 165 79.4
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 5.0e-72 274.6 173 77.5
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 6.5e-72 274.2 163 81.0
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.9e-71 272.7 155 81.9
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.5e-71 272.3 173 76.9
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 3.2e-71 271.9 151 84.8
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 4.2e-71 271.6 173 76.3
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 7.2e-71 270.8 152 82.9
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 1.2e-70 270.0 163 78.5
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 1.2e-70 270.0 170 75.9
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 1.6e-70 269.6 165 77.6
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 1.6e-70 269.6 163 78.5
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 2.1e-70 269.2 165 78.2
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.8e-69 266.2 159 80.5
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 2.3e-69 265.8 173 76.3
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.0e-69 265.0 165 75.8
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.0e-69 265.0 165 75.8
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 5.2e-69 264.6 164 76.8
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.2e-69 264.6 163 76.1
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 6.8e-69 264.2 170 77.6
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.2e-68 263.5 165 77.0
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.5e-68 263.1 162 77.8
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 2.0e-68 262.7 163 76.1
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 3.4e-68 261.9 165 77.0
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 5.7e-68 261.2 164 77.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.5e-68 260.8 151 80.1
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.3e-67 260.0 166 73.5
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 3.7e-67 258.5 168 75.6
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 8.3e-67 257.3 170 73.5
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.4e-66 255.8 155 77.4
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 9.1e-66 253.8 165 74.5
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.2e-65 253.4 188 68.6
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.0e-65 252.7 165 73.3
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 4.5e-65 251.5 165 74.5
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.0e-64 250.4 158 77.2
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 3.8e-64 248.4 162 74.1
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 5.0e-64 248.1 139 81.3
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 5.0e-64 248.1 139 81.3
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.9e-63 246.1 151 76.8
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.9e-63 246.1 171 70.2
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 4.2e-63 245.0 151 76.2
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 3.6e-62 241.9 151 75.5
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 4.7e-62 241.5 167 71.9
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.4e-61 240.0 156 71.8
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 2.2e-59 232.6 188 62.2
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 1.0e-56 223.8 166 68.7
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.7e-56 223.0 157 68.2
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 2.9e-56 222.2 316 42.4
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 5.0e-56 221.5 141 75.2
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 8.6e-56 220.7 122 83.6
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 1.1e-55 220.3 142 76.1
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.5e-55 219.2 155 64.5
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 4.7e-54 214.9 179 60.9
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 6.1e-54 214.5 152 66.4
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 3.4e-52 208.8 134 76.1
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 5.6e-47 191.4 112 78.6
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 1.4e-42 176.8 308 38.3
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 9.2e-42 174.1 170 55.9
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 1.6e-38 163.3 222 45.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 6.8e-37 157.9 202 45.0
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.8e-28 128.3 80 71.2
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.3e-27 127.1 84 76.2
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 6.4e-27 124.8 76 73.7
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.0e-24 117.5 66 83.3
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.4e-20 102.1 55 80.0
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 1.3e-14 84.0 44 79.5
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 9.9e-12 74.3 69 50.7
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 9.9e-12 74.3 44 75.0
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 1.9e-10 70.1 88 43.2
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.2e-10 68.9 119 37.0
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 6.7e-08 61.6 47 66.0
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-06 57.4 39 64.1


User provided reference genes

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