Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 5.1e-311 1070.1 495 100.0
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 3.0e-242 841.6 496 78.4
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 8.1e-240 833.6 495 77.8
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 2.5e-233 812.0 501 74.5
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 2.2e-221 772.3 468 73.9
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 6.5e-221 770.8 447 74.9
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 1.2e-219 766.5 466 73.2
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 1.0e-218 763.5 448 76.3
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 1.3e-218 763.1 476 73.1
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 1.3e-218 763.1 476 73.1
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.3e-218 763.1 469 72.9
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 2.3e-218 762.3 427 78.9
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.5e-217 759.6 469 72.5
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 5.7e-217 757.7 430 77.2
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 4.8e-216 754.6 424 78.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 6.3e-216 754.2 468 72.2
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 1.1e-215 753.4 428 77.1
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 1.1e-215 753.4 429 78.3
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.1e-215 753.4 427 75.6
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 1.1e-215 753.4 430 77.7
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 3.1e-215 751.9 440 74.5
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 5.3e-215 751.1 473 72.1
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 6.9e-215 750.7 514 67.7
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 1.2e-214 750.0 475 72.4
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 1.5e-214 749.6 469 71.6
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 3.4e-214 748.4 424 78.3
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 3.4e-214 748.4 434 75.1
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 4.5e-214 748.0 427 76.8
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 7.7e-214 747.3 473 71.5
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 1.7e-213 746.1 429 75.5
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 3.8e-213 745.0 425 76.7
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 1.1e-212 743.4 470 70.9
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 3.2e-212 741.9 426 76.1
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 5.5e-212 741.1 468 71.6
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.7e-211 738.8 460 71.7
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 3.6e-211 738.4 429 74.8
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 4.6e-211 738.0 489 68.5
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 2.3e-210 735.7 463 71.5
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.3e-210 735.7 433 74.6
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 3.0e-210 735.3 465 71.4
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 3.9e-210 734.9 445 72.8
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 8.8e-210 733.8 428 75.5
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 8.8e-210 733.8 496 69.4
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 1.1e-209 733.4 423 76.8
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.1e-209 733.4 430 74.7
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 2.6e-209 732.3 462 70.1
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 4.4e-209 731.5 427 75.9
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 5.7e-209 731.1 429 74.8
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 5.7e-209 731.1 481 68.2
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 9.7e-209 730.3 428 74.1
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 9.7e-209 730.3 459 70.6
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 3.7e-208 728.4 474 69.2
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 8.2e-208 727.2 487 69.2
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 4.1e-207 724.9 432 74.8
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 4.1e-207 724.9 469 69.5
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 5.3e-207 724.5 441 72.8
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 5.3e-207 724.5 471 69.9
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 1.5e-206 723.0 469 69.3
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 2.0e-206 722.6 425 74.8
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.5e-206 721.5 443 72.9
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 7.7e-206 720.7 423 74.9
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 1.0e-205 720.3 429 74.4
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.3e-205 719.9 471 69.4
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 1.7e-205 719.5 481 68.2
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.7e-205 719.5 485 67.8
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 2.2e-205 719.2 425 73.9
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 3.8e-205 718.4 433 74.4
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 5.0e-205 718.0 471 70.9
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.1e-204 716.8 470 69.4
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 4.2e-204 714.9 438 71.9
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 7.2e-204 714.1 484 66.9
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 2.7e-203 712.2 438 71.5
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 5.2e-202 708.0 439 71.1
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 5.2e-202 708.0 439 71.1
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 1.5e-201 706.4 483 65.8
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 7.4e-201 704.1 494 65.2
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 9.7e-201 703.7 461 70.5
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 1.3e-200 703.4 474 67.3
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 4.8e-200 701.4 493 66.3
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 8.2e-200 700.7 430 71.2
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 3.1e-199 698.7 427 72.1
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 1.0e-197 693.7 435 70.6
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 3.8e-197 691.8 433 70.2
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 3.8e-197 691.8 495 64.2
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.5e-196 689.9 498 64.7
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 3.2e-196 688.7 454 68.3
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 2.7e-195 685.6 475 65.7
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 1.0e-194 683.7 428 73.6
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 3.3e-193 678.7 432 70.6
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 1.7e-192 676.4 425 70.1
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.8e-191 672.9 428 67.1
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.1e-187 659.4 510 58.6
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.3e-184 650.2 431 68.9
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 2.2e-184 649.4 427 66.3
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 5.4e-183 644.8 514 58.6
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 7.0e-183 644.4 378 74.9
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 3.2e-180 635.6 380 74.2
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 3.2e-180 635.6 380 74.2
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 1.4e-175 620.2 470 61.7
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 3.1e-175 619.0 442 64.5
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 2.0e-174 616.3 374 71.9
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.1e-172 610.5 380 72.9
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.4e-169 599.0 343 76.7
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 4.4e-169 598.6 428 63.6
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 9.8e-169 597.4 428 62.9
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 6.4e-168 594.7 419 64.9
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 1.5e-164 583.6 363 70.8
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.4e-162 577.0 432 63.7
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.1e-162 575.9 325 76.0
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 1.7e-160 570.1 408 65.2
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 1.4e-159 567.0 426 59.2
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 2.7e-158 562.8 428 59.8
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 2.3e-157 559.7 518 53.7
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 1.9e-151 540.0 442 55.9
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 4.0e-146 522.3 396 58.1
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.3e-144 517.3 433 59.4
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 7.6e-137 491.5 321 65.7
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 1.3e-133 480.7 427 53.9
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 3.6e-131 472.6 270 74.8
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.1e-116 424.5 254 74.8
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 7.9e-102 375.2 447 42.5
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 5.7e-100 369.0 218 72.0
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 4.4e-84 316.2 184 74.5
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 1.2e-73 281.6 162 76.5
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 8.8e-69 265.4 426 38.3
Hma1.2p1_0393F.1_g143070 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 7.7e-65 252.3 148 72.3
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.4e-61 241.5 437 34.8
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.7e-56 224.6 110 84.5
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 2.0e-52 211.1 131 73.3
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 5.8e-52 209.5 128 73.4
SEGI_31241 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.5e-47 194.1 148 54.7
FAN24G1627 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.4e-45 188.3 118 69.5
Sabra18G0041600 Salix brachista HOM05D005302 ORTHO05D006422 5.4e-42 176.4 109 73.4
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 6.8e-37 159.5 185 45.4
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.1e-34 152.1 107 63.6
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 1.3e-27 128.6 186 40.9
Sabra18G0041700 Salix brachista HOM05D005302 ORTHO05D006422 4.4e-20 103.6 60 73.3
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.2e-18 97.1 61 67.2
BcaC09g52073 Brassica carinata HOM05D002602 ORTHO05D002661 2.3e-08 64.7 41 65.9
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 4.8e-06 57.0 104 36.5


User provided reference genes

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