Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 8.0e-172 607.1 319 100.0
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 8.3e-137 490.7 321 82.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 3.4e-130 468.8 321 79.1
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 9.2e-128 460.7 326 75.5
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.1e-124 449.5 322 75.2
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.2e-119 433.7 321 71.3
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 3.0e-118 429.1 325 72.3
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 4.3e-117 425.2 323 71.2
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.3e-116 423.7 323 70.6
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 3.1e-115 419.1 322 70.5
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 6.9e-115 417.9 328 69.5
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 6.9e-115 417.9 324 69.8
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 9.0e-115 417.5 321 69.2
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.0e-114 416.4 322 70.5
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.6e-114 416.0 325 69.2
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 4.4e-114 415.2 321 69.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.3e-113 413.7 324 68.8
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.7e-113 413.3 325 68.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 3.2e-112 409.1 325 70.2
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 2.7e-111 406.0 321 68.8
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 7.9e-111 404.4 321 68.2
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.7e-110 403.3 321 68.8
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 6.6e-110 401.4 323 67.8
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 8.7e-110 401.0 325 67.4
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 8.7e-110 401.0 324 68.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.1e-109 400.6 330 66.1
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 1.9e-109 399.8 330 67.9
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.9e-109 399.8 321 68.2
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 5.6e-109 398.3 323 65.6
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 5.6e-109 398.3 324 67.3
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 5.6e-109 398.3 321 68.2
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.3e-109 397.9 324 68.8
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.3e-108 397.1 289 73.7
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 2.1e-108 396.4 319 69.6
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.8e-108 396.0 321 65.1
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 4.8e-108 395.2 322 67.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 6.2e-108 394.8 324 67.9
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.4e-107 393.7 324 68.2
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 1.8e-107 393.3 325 66.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 4.0e-107 392.1 320 68.1
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 5.3e-107 391.7 322 65.8
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 9.0e-107 391.0 341 63.0
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.5e-106 390.2 329 65.3
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 1.5e-106 390.2 320 67.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 7.6e-106 387.9 324 66.0
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 9.9e-106 387.5 324 65.7
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 1.3e-105 387.1 321 67.0
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.3e-105 387.1 321 67.0
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.2e-105 386.3 313 69.3
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 4.9e-105 385.2 321 68.5
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.1e-104 384.0 320 65.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.1e-104 384.0 332 65.1
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.4e-104 382.9 322 65.8
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.2e-103 380.6 249 78.7
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.7e-103 379.4 333 64.0
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 3.5e-103 379.0 316 67.1
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 4.6e-103 378.6 259 75.7
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 6.0e-103 378.3 322 64.3
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 7.9e-103 377.9 259 75.3
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 7.9e-103 377.9 253 76.3
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 1.0e-102 377.5 324 64.8
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.8e-102 376.7 296 69.6
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.8e-102 376.7 336 63.1
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.8e-102 376.7 288 68.4
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.3e-102 376.3 258 74.4
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 3.0e-102 375.9 336 62.8
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 8.7e-102 374.4 322 65.5
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 1.5e-101 373.6 274 71.2
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 2.5e-101 372.9 319 64.6
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 7.4e-101 371.3 304 67.8
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 2.1e-100 369.8 259 73.0
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.8e-100 369.4 351 59.8
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 2.8e-100 369.4 325 62.5
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 6.2e-100 368.2 236 79.7
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 2.4e-99 366.3 315 60.0
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.1e-99 365.9 329 61.7
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 1.2e-98 364.0 328 60.4
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 3.4e-98 362.5 250 75.6
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 3.8e-97 359.0 301 65.8
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.9e-97 358.6 331 61.0
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 8.4e-97 357.8 287 66.2
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.1e-96 357.5 265 69.8
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.1e-96 357.5 236 76.7
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.4e-96 357.1 364 57.7
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 1.9e-96 356.7 317 63.1
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.6e-95 352.1 310 59.4
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 6.0e-95 351.7 342 58.5
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.6e-92 343.6 291 64.6
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 5.3e-91 338.6 322 57.5
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 5.0e-89 332.0 250 68.8
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.3e-86 323.2 221 73.8
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.8e-83 313.5 244 67.6
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.0e-82 310.1 332 56.9
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 5.0e-81 305.4 249 67.9
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 2.2e-76 290.0 229 67.7
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 5.3e-75 285.4 213 71.8
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 5.0e-73 278.9 216 62.0
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 4.2e-72 275.8 212 69.3
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.6e-71 273.9 318 47.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.7e-71 273.1 229 63.8
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 8.8e-70 268.1 275 49.5
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.4e-67 260.0 252 51.6
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.7e-65 253.8 259 57.9
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.4e-62 244.2 263 47.9
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.8e-60 236.5 251 49.4
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 3.7e-60 236.1 253 48.6
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 2.7e-58 229.9 254 49.6
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.9e-57 226.5 248 49.2
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.3e-52 211.1 256 43.8
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 3.0e-46 189.9 124 76.6
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 9.8e-45 184.9 129 75.2
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 9.2e-43 178.3 245 41.6
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.3e-41 173.7 245 39.2
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.6e-41 172.2 161 63.4
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 4.9e-36 156.0 317 39.4
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.1e-24 118.2 243 30.5
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 1.7e-20 104.4 234 31.2
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 7.1e-11 72.4 86 54.7
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 6.2e-07 59.3 32 90.6


User provided reference genes

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