Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.A00144 Erythranthe guttata HOM05D003538 ORTHO05D004376 1.7e-293 1011.9 514 100.0
MSTRG.11666 Avicennia marina HOM05D003538 ORTHO05D004376 1.9e-183 646.4 522 64.2
Sopen08g019050 Solanum pennellii HOM05D003538 ORTHO05D004376 9.4e-106 388.3 510 44.9
Actinidia01196 Actinidia chinensis HOM05D003538 ORTHO05D004376 1.6e-105 387.5 503 45.1
Actinidia30305 Actinidia chinensis HOM05D003538 ORTHO05D004376 8.8e-104 381.7 509 44.4
Solyc08g065440.4 Solanum lycopersicum HOM05D003538 ORTHO05D004376 1.5e-103 380.9 510 44.1
Peaxi162Scf00136g00059 Petunia axillaris HOM05D003538 ORTHO05D004376 9.7e-103 378.3 488 46.1
CSS0001901 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.7e-102 377.5 517 44.1
Nitab4.5_0001584g0040 Nicotiana tabacum HOM05D003538 ORTHO05D004376 2.4e-101 373.6 523 43.0
Nitab4.5_0001179g0130 Nicotiana tabacum HOM05D003538 ORTHO05D004376 2.2e-99 367.1 522 42.9
Rhsim11G0045200 Rhododendron simsii HOM05D003538 ORTHO05D004376 2.1e-97 360.5 492 43.9
Cc08_g10420 Coffea canephora HOM05D003538 ORTHO05D004376 3.0e-96 356.7 444 46.2
Ciclev10007991m.g Citrus clementina HOM05D003538 ORTHO05D004376 2.6e-95 353.6 521 40.3
SalBow4G0582 Salvia bowleyana HOM05D003538 ORTHO05D004376 2.2e-94 350.5 253 69.6
Atru.chr7.1041 Acer truncatum HOM05D003538 ORTHO05D004376 1.4e-93 347.8 529 39.5
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 2.4e-93 347.1 530 40.9
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 8.5e-91 338.6 516 40.3
SalBow4G1879 Salvia bowleyana HOM05D003538 ORTHO05D004376 3.2e-90 336.7 528 41.1
COL.COLO4_21041 Corchorus olitorius HOM05D003538 ORTHO05D004376 1.2e-87 328.2 517 38.7
QL02p001408 Quercus lobata HOM05D003538 ORTHO05D004376 5.7e-87 325.9 529 39.1
Duzib168G2161 Durio zibethinus HOM05D003538 ORTHO05D004376 9.8e-87 325.1 518 38.6
PGSC0003DMG400002203 Solanum tuberosum HOM05D003538 ORTHO05D004376 6.3e-86 322.4 434 43.3
Lj7C279G1 Lonicera japonica HOM05D003538 ORTHO05D004376 8.3e-86 322.0 484 42.1
SGA_v2.0_scaffold734G53534 Striga asiatica HOM05D003538 ORTHO05D004376 1.1e-85 321.6 261 63.2
Potri.006G230900 Populus trichocarpa HOM05D003538 ORTHO05D004376 2.4e-85 320.5 519 37.2
PGR044G1201 Punica granatum HOM05D003538 ORTHO05D004376 5.0e-83 312.8 481 38.9
Gohir.A05G043100 Gossypium hirsutum HOM05D003538 ORTHO05D004376 8.5e-83 312.0 505 37.6
MBI03_g13775_MAGBIO Magnolia biondii HOM05D003538 ORTHO05D004376 4.2e-82 309.7 520 38.7
Gorai.009G045900 Gossypium raimondii HOM05D003538 ORTHO05D004376 3.6e-81 306.6 505 37.0
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 2.0e-79 300.8 402 43.3
CiPaw.16G029300 Carya illinoinensis HOM05D003538 ORTHO05D004376 9.8e-79 298.5 512 37.5
TWI32G0386 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 1.6e-76 291.2 476 36.6
MELO3C016862.2 Cucumis melo HOM05D003538 ORTHO05D004376 1.0e-75 288.5 495 36.8
Nn6g35422 Nelumbo nucifera HOM05D003538 ORTHO05D004376 2.3e-75 287.3 534 36.0
CsaV3_4G035550 Cucumis sativus L. HOM05D003538 ORTHO05D004376 5.0e-75 286.2 495 36.8
Sed0023083 Sechium edule HOM05D003538 ORTHO05D004376 5.0e-75 286.2 492 36.8
Manes.03G047000 Manihot esculenta HOM05D003538 ORTHO05D004376 1.5e-74 284.6 382 41.1
Eucgr.C03022 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.2e-73 281.6 475 37.3
Sabra06G0179100 Salix brachista HOM05D003538 ORTHO05D004376 1.8e-72 277.7 552 33.7
Prupe.7G213400 Prunus persica HOM05D003538 ORTHO05D004376 6.8e-72 275.8 528 35.4
CANSAT25G2654 Cannabis sativa HOM05D003538 ORTHO05D004376 1.2e-71 275.0 514 36.4
ClCG05G017780 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.5e-71 274.6 516 34.7
Sc23g0005570 Simmondsia chinensis HOM05D003538 ORTHO05D004376 4.4e-71 273.1 533 34.0
Lalb_Chr22g0356041 Lupinus albus HOM05D003538 ORTHO05D004376 3.7e-70 270.0 386 40.4
Medtr1g016740 Medicago truncatula HOM05D003538 ORTHO05D004376 3.7e-70 270.0 403 40.0
Thecc.09G052400 Theobroma cacao HOM05D003538 ORTHO05D004376 3.7e-70 270.0 375 40.3
Hund03347 Selenicereus undatus HOM05D003538 ORTHO05D004376 1.1e-69 268.5 479 36.7
TPR.G13110 Trifolium pratense HOM05D003538 ORTHO05D004376 1.4e-69 268.1 422 38.6
Gohir.D05G044800 Gossypium hirsutum HOM05D003538 ORTHO05D004376 7.0e-69 265.8 375 40.3
Aqoxy7G04069 Aquilegia oxysepala HOM05D003538 ORTHO05D004376 9.2e-69 265.4 410 38.8
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 2.7e-68 263.8 532 32.1
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 4.6e-68 263.1 395 40.0
PSO210G5813 Papaver somniferum HOM05D003538 ORTHO05D004376 1.7e-67 261.2 531 36.0
AUR62009165 Chenopodium quinoa HOM05D003538 ORTHO05D004376 1.1e-66 258.5 411 38.0
vmacro00153 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 1.5e-66 258.1 454 37.4
Lsat_1_v5_gn_3_24260 Lactuca sativa HOM05D003538 ORTHO05D004376 2.5e-66 257.3 406 39.2
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 3.3e-66 256.9 395 39.0
GSVIVG01015234001 Vitis vinifera HOM05D003538 ORTHO05D004376 1.6e-65 254.6 524 32.6
AUR62022058 Chenopodium quinoa HOM05D003538 ORTHO05D004376 2.1e-65 254.2 394 38.1
AUR62043933 Chenopodium quinoa HOM05D003538 ORTHO05D004376 2.1e-65 254.2 394 38.1
Glyma.17G230200 Glycine max HOM05D003538 ORTHO05D004376 4.7e-65 253.1 487 35.9
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 6.2e-65 252.7 538 33.8
Haze_18202 Corylus avellana HOM05D003538 ORTHO05D004376 8.0e-65 252.3 566 33.2
PSO210G6318 Papaver somniferum HOM05D003538 ORTHO05D004376 1.0e-64 251.9 532 35.7
QL02p063126 Quercus lobata HOM05D003538 ORTHO05D004376 6.8e-64 249.2 529 33.6
Cfa003115 Carpinus fangiana HOM05D003538 ORTHO05D004376 8.9e-64 248.8 527 33.6
CSS0008213 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.7e-62 244.6 534 32.4
MD02G1074500 Malus domestica HOM05D003538 ORTHO05D004376 2.9e-62 243.8 529 34.2
Ah.11g044700 Amaranthus hybridus HOM05D003538 ORTHO05D004376 6.4e-62 242.7 515 33.2
Glyma.14G093500 Glycine max HOM05D003538 ORTHO05D004376 7.0e-61 239.2 384 38.3
Actinidia29888 Actinidia chinensis HOM05D003538 ORTHO05D004376 9.2e-61 238.8 528 33.9
EL10Ac2g03914 Beta vulgaris HOM05D003538 ORTHO05D004376 1.6e-60 238.0 393 36.9
Dinv27976 Davidia involucrata HOM05D003538 ORTHO05D004376 2.7e-60 237.3 269 46.1
ClCG03G015790 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.0e-59 235.3 523 31.0
HanXRQChr06g0173831 Helianthus annuus HOM05D003538 ORTHO05D004376 1.0e-59 235.3 405 35.1
Haze_25885 Corylus avellana HOM05D003538 ORTHO05D004376 1.7e-59 234.6 419 35.1
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 3.9e-59 233.4 401 35.9
Ciclev10007935m.g Citrus clementina HOM05D003538 ORTHO05D004376 1.1e-58 231.9 530 30.0
Cc06_g11090 Coffea canephora HOM05D003538 ORTHO05D004376 1.1e-58 231.9 526 31.2
Lj7A672T62 Lonicera japonica HOM05D003538 ORTHO05D004376 2.5e-58 230.7 454 33.7
CDE02G0844 Ceratophyllum demersum HOM05D003538 ORTHO05D004376 3.3e-58 230.3 483 32.1
Atru.chr7.1545 Acer truncatum HOM05D003538 ORTHO05D004376 9.5e-58 228.8 499 32.7
CiPaw.04G152000 Carya illinoinensis HOM05D003538 ORTHO05D004376 3.6e-57 226.9 526 31.6
Sed0013907 Sechium edule HOM05D003538 ORTHO05D004376 1.8e-56 224.6 530 29.8
Hma1.2p1_0798F.1_g219590 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 8.9e-56 222.2 529 32.1
Hma1.2p1_1074F.1_g254274 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 8.9e-56 222.2 529 32.1
TWI34G1305 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 4.4e-55 219.9 523 33.5
Gohir.D07G010500 Gossypium hirsutum HOM05D003538 ORTHO05D004376 8.3e-54 215.7 439 33.5
Gorai.001G010900 Gossypium raimondii HOM05D003538 ORTHO05D004376 1.1e-53 215.3 439 33.5
Rhsim03G0234300 Rhododendron simsii HOM05D003538 ORTHO05D004376 1.1e-53 215.3 495 33.7
CsaV3_1G040220 Cucumis sativus L. HOM05D003538 ORTHO05D004376 1.4e-53 214.9 406 33.5
PGSC0003DMG400008432 Solanum tuberosum HOM05D003538 ORTHO05D004376 1.4e-53 214.9 498 33.1
Sed0020375 Sechium edule HOM05D003538 ORTHO05D004376 2.4e-53 214.2 386 35.8
RcHm_v2.0_Chr2g0092961 Rosa chinensis HOM05D003538 ORTHO05D004376 2.1e-52 211.1 489 32.7
HPP92_009156 Vanilla planifolia HOM05D003538 ORTHO05D004376 2.1e-52 211.1 518 30.1
Carub.0006s1031 Capsella rubella HOM05D003538 ORTHO05D004376 2.7e-52 210.7 473 30.2
MELO3C015449.2 Cucumis melo HOM05D003538 ORTHO05D004376 4.6e-52 209.9 406 32.8
Thhalv10013348m.g Eutrema salsugineum HOM05D003538 ORTHO05D004376 1.0e-51 208.8 521 30.5
Lsat_1_v5_gn_8_87540 Lactuca sativa HOM05D003538 ORTHO05D004376 1.3e-51 208.4 474 33.8
Duzib168G1022 Durio zibethinus HOM05D003538 ORTHO05D004376 2.3e-51 207.6 404 34.9
Glyma.07G128300 Glycine max HOM05D003538 ORTHO05D004376 5.1e-51 206.5 524 30.2
AL6G22530 Arabidopsis lyrata HOM05D003538 ORTHO05D004376 6.6e-51 206.1 517 30.4
Sopen07g015920 Solanum pennellii HOM05D003538 ORTHO05D004376 6.6e-51 206.1 540 30.9
CANSAT56G3152 Cannabis sativa HOM05D003538 ORTHO05D004376 1.5e-50 204.9 445 33.5
Thecc.09G092900 Theobroma cacao HOM05D003538 ORTHO05D004376 3.3e-50 203.8 409 32.8
AT5G11780 Arabidopsis thaliana HOM05D003538 ORTHO05D004376 4.3e-50 203.4 513 30.6
Aa31LG3G15420 Aethionema arabicum HOM05D003538 ORTHO05D004376 9.5e-50 202.2 443 33.6
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 9.5e-50 202.2 446 31.8
SalBow1G0256 Salvia bowleyana HOM05D003538 ORTHO05D004376 2.1e-49 201.1 533 29.3
CsaV3_UNG062480 Cucumis sativus L. HOM05D003538 ORTHO05D004376 2.8e-49 200.7 432 31.5
VMungo0464G1250 Vigna mungo HOM05D003538 ORTHO05D004376 8.1e-49 199.1 525 30.3
CARHR201410 Cardamine hirsuta HOM05D003538 ORTHO05D004376 2.3e-48 197.6 433 31.4
Manes.03G031601 Manihot esculenta HOM05D003538 ORTHO05D004376 2.3e-48 197.6 498 29.5
Eucgr.C03664 Eucalyptus grandis HOM05D003538 ORTHO05D004376 3.1e-48 197.2 411 33.3
FvH4_1g07060 Fragaria vesca HOM05D003538 ORTHO05D004376 3.1e-48 197.2 411 32.8
Glyma.01G003600 Glycine max HOM05D003538 ORTHO05D004376 3.1e-48 197.2 526 30.4
Oeu018651.1 Olea europaea HOM05D003538 ORTHO05D004376 5.2e-48 196.4 269 43.9
Phvul.004G172000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 8.9e-48 195.7 522 30.7
FAN19G1852 Fragaria x ananassa HOM05D003538 ORTHO05D004376 2.0e-47 194.5 411 32.6
MSTRG.26404 Avicennia marina HOM05D003538 ORTHO05D004376 2.6e-47 194.1 545 30.1
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea HOM05D003538 ORTHO05D004376 1.3e-46 191.8 524 28.8
HanXRQChr02g0044571 Helianthus annuus HOM05D003538 ORTHO05D004376 1.3e-46 191.8 527 30.7
Lalb_Chr24g0393871 Lupinus albus HOM05D003538 ORTHO05D004376 1.7e-46 191.4 474 30.8
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea HOM05D003538 ORTHO05D004376 2.2e-46 191.0 524 29.0
BraA10t44658Z Brassica rapa HOM05D003538 ORTHO05D004376 1.4e-45 188.3 445 30.8
Lj2g0016122 Lotus japonicus HOM05D003538 ORTHO05D004376 1.9e-45 188.0 493 28.4
BcaC04g19195 Brassica carinata HOM05D003538 ORTHO05D004376 4.1e-45 186.8 443 31.4
Zm00001eb161340 Zea mays HOM05D003538 ORTHO05D004376 4.1e-45 186.8 528 31.4
Aa31LG8G16630 Aethionema arabicum HOM05D003538 ORTHO05D004376 7.1e-45 186.0 506 30.0
A10p25960 Brassica napus HOM05D003538 ORTHO05D004376 2.1e-44 184.5 446 31.2
Medtr6g091790 Medicago truncatula HOM05D003538 ORTHO05D004376 2.1e-44 184.5 396 31.8
Gohir.A07G010200 Gossypium hirsutum HOM05D003538 ORTHO05D004376 2.7e-44 184.1 406 33.0
BolC9t59332H Brassica oleracea HOM05D003538 ORTHO05D004376 3.5e-44 183.7 447 31.1
C09p65040 Brassica napus HOM05D003538 ORTHO05D004376 4.6e-44 183.3 445 31.0
THA.LOC104814609 Tarenaya hassleriana HOM05D003538 ORTHO05D004376 6.0e-44 183.0 357 33.9
vmacro06276 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 1.7e-43 181.4 430 34.2
FAN26G3060 Fragaria x ananassa HOM05D003538 ORTHO05D004376 3.0e-43 180.6 486 29.0
Manes.03G034901 Manihot esculenta HOM05D003538 ORTHO05D004376 3.6e-41 173.7 412 29.9
Medtr6g091900 Medicago truncatula HOM05D003538 ORTHO05D004376 1.8e-40 171.4 386 30.6
ECA246G1935 Erigeron canadensis HOM05D003538 ORTHO05D004376 1.1e-37 162.2 241 37.3
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 1.1e-37 162.2 268 36.9
FAN23G1479 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.9e-37 161.4 466 28.5
Zm00001eb357710 Zea mays HOM05D003538 ORTHO05D004376 4.2e-37 160.2 532 29.3
Cpa.g.sc7.247 Carica papaya HOM05D003538 ORTHO05D004376 2.5e-34 151.0 273 34.4
unitig_699.g19305 Utricularia gibba HOM05D003538 ORTHO05D004376 3.3e-34 150.6 514 26.5
ECA236G1610 Erigeron canadensis HOM05D003538 ORTHO05D004376 4.8e-33 146.7 382 30.6
Sc18g0001860 Simmondsia chinensis HOM05D003538 ORTHO05D004376 1.1e-29 135.6 261 32.2
SGA_v2.0_scaffold187G40255 Striga asiatica HOM05D003538 ORTHO05D004376 1.2e-28 132.1 138 51.4
Manes.03G031262 Manihot esculenta HOM05D003538 ORTHO05D004376 3.5e-28 130.6 297 29.3
Manes.03G030833 Manihot esculenta HOM05D003538 ORTHO05D004376 6.0e-28 129.8 278 30.6
Manes.03G031366 Manihot esculenta HOM05D003538 ORTHO05D004376 1.3e-27 128.6 274 31.0
Medtr6g092160 Medicago truncatula HOM05D003538 ORTHO05D004376 1.3e-27 128.6 288 28.8
DCAR_011998 Daucus carota HOM05D003538 ORTHO05D004376 3.0e-27 127.5 217 35.0
Psat6g019320 Pisum sativum HOM05D003538 ORTHO05D004376 4.8e-25 120.2 379 26.6
Os01g0600300 Oryza sativa ssp. japonica HOM05D003538 ORTHO05D004376 1.5e-23 115.2 290 33.1
Solyc07g032260.3 Solanum lycopersicum HOM05D003538 ORTHO05D004376 2.2e-22 111.3 268 30.2
DCAR_004434 Daucus carota HOM05D003538 ORTHO05D004376 1.1e-18 99.0 155 44.5
SEGI_33762 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 6.2e-17 93.2 453 24.9
ATR0789G162 Amborella trichopoda HOM05D003538 ORTHO05D004376 8.1e-17 92.8 269 28.3
Oeu039611.1 Olea europaea HOM05D003538 ORTHO05D004376 1.4e-16 92.0 248 27.4
FAN26G2436 Fragaria x ananassa HOM05D003538 ORTHO05D004376 5.3e-16 90.1 243 28.4
Hma1.2p1_0798F.1_g219600 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 2.6e-15 87.8 250 29.2
Eucgr.L03304 Eucalyptus grandis HOM05D003538 ORTHO05D004376 3.8e-14 84.0 188 32.4
Sopen07g015930 Solanum pennellii HOM05D003538 ORTHO05D004376 3.8e-14 84.0 238 29.8
Cpa.g.sc7.246 Carica papaya HOM05D003538 ORTHO05D004376 8.4e-14 82.8 220 28.2
RcHm_v2.0_Chr4g0406051 Rosa chinensis HOM05D003538 ORTHO05D004376 2.7e-12 77.8 215 32.1
ATR0789G133 Amborella trichopoda HOM05D003538 ORTHO05D004376 1.0e-11 75.9 139 35.3
RcHm_v2.0_Chr4g0425381 Rosa chinensis HOM05D003538 ORTHO05D004376 8.7e-11 72.8 215 31.6
Medtr6g092190 Medicago truncatula HOM05D003538 ORTHO05D004376 1.5e-10 72.0 250 25.2
Oeu021470.1 Olea europaea HOM05D003538 ORTHO05D004376 3.1e-08 64.3 87 33.3
SEGI_10797 Sequoiadendron giganteum HOM05D003538 ORTHO05D004376 2.0e-07 61.6 152 29.6
Thecc.06G128700 Theobroma cacao HOM05D003538 ORTHO05D004376 7.6e-07 59.7 114 32.5
Lj7A278T10 Lonicera japonica HOM05D003538 ORTHO05D004376 2.9e-06 57.8 140 33.6


User provided reference genes

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